Nipponia nippon (crested ibis): 104010685 Help Entry 104010685         CDS       T05756                                  Symbol ATG4B Name (RefSeq) cysteine protease ATG4B   KO K08342   cysteine protease ATG4 [EC:3.4.22.-] Organism nni  Nipponia nippon (crested ibis) Pathway nni04136   Autophagy - other nni04140   Autophagy - animal Brite KEGG Orthology (KO) [BR:nni00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     104010685 (ATG4B)    04136 Autophagy - other     104010685 (ATG4B)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:nni01002]     104010685 (ATG4B)   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:nni04131]     104010685 (ATG4B)    03029 Mitochondrial biogenesis [BR:nni03029]     104010685 (ATG4B) Peptidases and inhibitors [BR:nni01002]  Cysteine peptidases   Family C54: Aut2 peptidase family    104010685 (ATG4B) Membrane trafficking [BR:nni04131]  Autophagy   Autophagosome formation proteins    Atg8 conjugation proteins     104010685 (ATG4B) Mitochondrial biogenesis [BR:nni03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     104010685 (ATG4B) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Peptidase_C54 ATG4_LIR Motif Other DBs NCBI-GeneID:  104010685 NCBI-ProteinID:  XP_009461111 LinkDB All DBs Position Unknown AA seq 425 aa AA seqDB search MSIRHCRRCLKGVTVSEGEATLETGRKPKKQFGKGATLTYDTLRFEYEEFPETKEPVWIL GRKYSVFTEKEEILLDVTSRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVC RHLGRDWRWIKGKRQMDNYFNVLNAFIDKKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVA QVLKKLATFDTWSSLAVHIAMDNTVVMEEIWRLCQSNFPCAGAAACPAVESDVLYNGYPE EAGVRDRLSLWKPLVLLIPLRLGLTEINEAYIETLKHCFMMPQSLGVIGGKPNSAHYFIG YVGEELIYLDPHTTQPAVEPNDSGCLPDESFHCQHPPCRMSIAELDPSIAVGFFCNTEED FNDWCQQIKKLSLVRGALPMFELVERQPSHFSNPDVLNLTPDSSDADRLERFFDSEDEDF EILSL NT seq 1278 nt NT seq  +upstreamnt  +downstreamnt atgtctatcagacattgcaggcgctgcctgaagggtgttactgtgtcggagggagaggcc acactagagactgggaggaagcccaagaagcaatttgggaagggagctactcttacctat gacactctcaggttcgaatatgaagaattccctgagaccaaagaacccgtttggatcctt ggccggaaatacagtgtttttacagagaaagaagagatcctgttggatgtgacctctcgg ctttggttcacctacaggaagaacttccctgctatcggaggaactggtcccacatctgat actggctggggctgtatgttgcggtgtggccagatgatctttgctcaggccttggtctgc agacatttgggaagagactggaggtggataaaagggaagaggcagatggataattacttc aatgttcttaatgccttcattgacaaaaaagacagctactactccattcaccagatagcc cagatgggagttggagagggaaaatccataggtcaatggtatggaccaaacacagttgca caagtgctcaaaaaacttgcaacttttgatacatggagttcactggcagtccatatagcc atggacaacacagtagtgatggaagaaatctggcggttgtgccagtccaacttcccgtgt gctggagctgcagcatgccctgctgtggagtcagacgtactctataacgggtacccagag gaagcaggggttagagataggctctcactgtggaaaccattggtgctgctgatacctctc cgccttgggctcacagagatcaatgaagcctatattgaaacactaaagcactgcttcatg atgccccagtccctgggagtgatcggagggaaaccaaacagtgctcactacttcattggc tatgtaggtgaggaactcatttacctggatccccacactacgcagcctgcagtggagccc aatgacagcggctgtctccctgatgaaagcttccactgccagcaccctccctgcagaatg agcattgccgagctcgacccctccattgcggtgggctttttctgcaacacagaggaggac tttaatgattggtgccagcaaatcaaaaagctgtccctggtaagaggagcgctgccaatg tttgaactggttgaacgccagccatcgcatttctccaaccccgatgtcctgaatctcaca ccagactcctccgatgccgacagattggaaaggttctttgactcggaagatgaagacttc gaaatcctgtccctttga

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