Nipponia nippon (crested ibis): 104010860
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Entry
104010860 CDS
T05756
Symbol
LMO7
Name
(RefSeq) LIM domain only protein 7
KO
K06084
F-box protein 20
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
104010860 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nni04121
]
104010860 (LMO7)
Ubiquitin system [BR:
nni04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
104010860 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
PDZ
LIM
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
104010860
NCBI-ProteinID:
XP_009461309
LinkDB
All DBs
Position
Unknown
AA seq
1617 aa
AA seq
DB search
MHDSHKDDRSYRRISVIEPKPTADFNRFLPNKNKQAAYVPAPLRKKRTEKNEDNRRSWAS
PVFTQSDGTFSSGRERNPVASCQNSRAERGLTNPASLQMIYEYDSGSDSEAERRLPDVVM
DDLAKRRFLVKKSPVSSAAPGHHFVLRNDSPKSCSQESYPAGPLAAMLEPLSNQRRQRQL
DTKEENKPRVNIPSELSGYFDEDEEEEIGIPNIEKDDLYFRKLSSSAANTVVAFDKFLPK
FWTPEEELLWKKIRKSSFKPWYKEIQGFSRKKSDSEDEDFVYKPSSAIVANQARPSFDWN
SSCRRDQSYKPTAEYAGSSLSQIAEGKILEASDQPSQFSLLQALQKYSDYLSSETKTRID
PTSGPRLIKCRKNISFVPGCKQGDTENGYLYPDLENDDLFVRKTGAFHVNQVVLQDPRYL
KKFSEQEPPLEGEIILQPREGQPVIPDLEKDDMIFRKILSQKKEVPLSGAPDKYHPALFP
DPWSLPEEIRSKFLCLLEKNTTPEERTSNGRVLSPSSRHKKDDMLTRKIESWKVGSNTQP
VNFIPGPCSEEDWKKWEAIREASKVRHKKRQMVERLFQKLSDEQGSKSLNDVSAEELQSL
RKIRYEELQRIKEQLQEQDLKWQEDLAKWKNRRKSFTSELQKKKEEREEIERRASEVSER
STKSLKEMQQEREDRDQDSYGLRKHERRWTYSLNDDVFSEEKAPSTRSASKDYLLEEDTS
YSTKDSKSAYAAQRRKENLPEGSASREAPASPKSLAEEQSSALLSTRYSVNAQTGSAQVS
ASLPRSYQKTDSSRLTSVVTPRPFGAQSRGISSLPRSFTMDDTLKYNGEVEKAKRTQTLF
TSSSFSQPDSAHPLSASVFRSRGEEEEDEEEKGVQSTPPPSLALPVKSQDQDAGSSILKP
EYCSPPDSLSLASSAENVSLPEPEDSKSLEQYSDMRISINQRPGHSRSFGFTTNWSSSGA
FVQTVEEGSPAALCQLHVDDEIIAINGTKVSRALETGNLVMDVRRYGKNDWGKDQPSLPH
VRHKILNLTSMATNIIGTSENKWIDATSGEYVSNASTLSTKRDFSSSLRNSDTETKLING
MQGDLGSSEQRASEPISLKNLKRRSQFFEQGGPEPAMPDLPVPSISAPSRRVWDQEEERK
RQEKWQKEQDRLLQEKYKREQEKLREEWLRAKQEAEKESSKYFDEEQTVLTLNTRSVLAR
APSVSSWRGSPEANTPEEPEGDGGSELAGRLLGEGEERRRLQEERRIQEEAALRFEQERE
LQELELERQRKEREQQYAEEQRRQAEMEEQRQQAERQVSVETPQYQRHYERYEVSKTIED
RAGHPLIDRHYERYEVSKTIEEQPGQSFADRNKSKSTSELNEFNTIRNGTQSKYSERSWN
TGELQKKSQKEHNVSAAELERQQILQEMRKKTSLHTDSSWIRQRSSSVHKEPISLYSSSM
RRGESLDNLDSSRTSSWRHHSWLNQSASSSSLSSSQDLSRPVSTSNRAYMCTPSSSKAPS
AAASARAPSVSQAAPRAQSPLSASQPGSQTRSRSVSGKKICSYCNNVLGKGAAMIIESLG
LCYHLHCFKCVACGCDLGGSRSGAEVRIRNNKLFCNDCYIRFKSTSSGGIGLLTDLN
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atgcatgactcccataaagatgacaggtcttaccgtaggatttctgtgattgaaccgaaa
cctaccgctgacttcaatcgcttcttacccaacaaaaacaagcaggcggcgtatgtgccg
gcacccttaaggaagaagaggacggagaagaatgaggacaacaggaggagctgggcaagt
cctgtcttcactcagtcagatggaacgttttcaagtggacgtgaaaggaatcccgtagct
tcctgccaaaatagcagagcagagcgtgggctcacaaatccagcttccctccagatgatc
tatgagtatgacagtggctctgattcagaagctgaaagaaggctgcctgacgtggttatg
gatgacttagcaaaacgtagatttctagtcaaaaagagccctgtaagctctgctgcacct
ggacatcatttcgtgttgcgcaatgactctcctaaatcttgctcacaagaaagttatcca
gctggtccactagctgcaatgcttgaaccactgagtaaccagaggaggcagaggcagttg
gatactaaagaggaaaacaaaccgagagttaacattccttcagaattatctgggtatttt
gatgaggacgaggaagaagaaataggcatcccaaacattgaaaaagatgatctctatttt
cgcaagctaagttcttcagcagcaaatacagtggttgcttttgacaaatttcttcctaag
ttttggactccagaagaagaattgctatggaaaaaaatcaggaaatcctctttcaaaccc
tggtataaagagattcaagggttcagcagaaagaaatcggattctgaggatgaggacttt
gtttacaaaccaagctctgccattgttgctaatcaagcaagaccaagttttgactggaac
agcagttgcagaagggatcagagctataagccaactgctgagtatgcgggaagctcattg
tcacagattgcagaaggaaaaatcttggaggcttctgatcagcccagtcagttttcgtta
cttcaggccctgcaaaaatactctgactacttgtcttctgaaacgaagaccagaattgat
cctacttctggccctaggctcataaagtgtagaaagaatatttcctttgtaccaggatgc
aagcaaggagacacggaaaatggatatctgtatccagatttagaaaacgatgacttgttc
gttcggaaaactggggctttccatgtgaatcaagttgttctccaagacccccggtattta
aaaaaattctctgagcaggagcctcccctagaaggtgagataattctgcaacccagagag
ggccaacctgtgattccagatttggaaaaggatgacatgattttccgtaaaatcctctct
cagaaaaaagaggtgcctttatcgggcgctccagacaagtatcacccagccctctttcct
gatccatggagtcttccggaggagatccggtccaaatttctgtgtttacttgaaaaaaac
acgacaccagaggaaagaacaagcaatggcagagtgctgtcaccatcttcccgccataag
aaggacgatatgctgacccgcaagattgaatcttggaaggtgggaagcaacacccagcca
gtaaatttcatcccgggtccgtgcagtgaagaagactggaagaagtgggaagcgatcagg
gaagccagcaaagttagacacaagaaacggcagatggtggagagactgtttcaaaagctt
tctgatgagcaagggagtaaatctttgaatgatgtcagcgcagaggagctgcagtcgttg
cgcaaaatccgttacgaagagctgcaaaggataaaagaacagttacaagaacaagattta
aagtggcaagaagatctagcaaaatggaagaatcgtagaaagagcttcacttcagaattg
caaaagaaaaaggaagagagagaagaaatagaaaggagagcctctgaggtgtctgaaagg
agtaccaagtcactgaaagaaatgcagcaggagcgggaggacagagatcaagactcctac
gggctgcgaaaacatgaacgcagatggacgtattcactgaatgatgatgtgtttagtgaa
gaaaaagcaccttccacacggtcagcatcaaaagattaccttttggaagaagatacctcc
tacagcacgaaggacagcaaaagtgcgtatgccgcacaacggcgcaaggagaacctgccg
gagggctcagcctctcgtgaagctcctgcttcgcccaagagcctggcagaggagcagagc
tccgctcttttgtctacccgctactcggtgaatgctcaaactgggtcagctcaggtttca
gcttctctcccaagaagttaccagaaaactgatagctctaggttaacatctgtggttaca
ccaagaccttttggtgcccagtcaagaggaatctcgtcacttccacggtcgttcacgatg
gatgatacactgaaatacaacggagaagtagaaaaagctaaaagaactcaaactttgttc
accagcagttcattttcacaaccagactctgcacaccctctctccgctagtgtgttcaga
agcagaggtgaggaggaggaggacgaggaggaaaaaggtgttcagtcaacacctcctcct
agtttggcattacctgtaaaatcccaagaccaagatgctggaagcagtattcttaaacca
gagtattgctctcctcctgattctctttcacttgcatcttctgcagaaaatgtgagtctg
ccagagcctgaggattcaaaatccctggaacagtacagtgacatgagaatcagtataaac
cagagacctggccacagtcgcagctttgggtttaccacaaattggagttcttcaggggcc
tttgtacagacagttgaagaaggtagccctgcagcactttgtcagctgcatgtagatgat
gagatcattgctatcaatggcacaaaggtttcacgagcactagaaactggaaacctggtc
atggatgtcagacgatatggaaagaatgattggggcaaagaccagccttccctgccacat
gtaaggcataaaatcctcaatctcaccagtatggctaccaacattataggtacatctgaa
aataaatggattgatgcaacttctggagaatacgtttcaaatgcttccaccctatcaaca
aaaagagatttctccagcagccttcgaaattctgatacagaaacaaagttgataaatgga
atgcaaggagatcttggctctagcgaacaaagagcatctgaacctatttctttgaaaaac
ttaaaaagacggtcacaattttttgaacaaggaggcccagagcctgcaatgcctgatctc
ccagtcccatccattagtgctcctagtcgtcgcgtttgggatcaagaggaagaacgaaaa
cgacaggaaaaatggcaaaaggagcaggaccgtttattgcaggagaaatacaaacgggaa
caagaaaaactgagggaagaatggctacgagctaagcaagaagcagaaaaagagagctcc
aagtattttgatgaggagcagactgttctaaccttaaacacaaggtctgtccttgcacgg
gctccgtctgtgtccagctggagaggaagccctgaagcgaatactcccgaggaaccagaa
ggagatggaggaagcgagctggcagggcgcttgctgggcgagggagaagaaaggaggagg
cttcaggaggaacggaggatccaggaagaagcagccctgcgttttgagcaagaaagggaa
ctccaagagctggagcttgagagacaacgtaaagagagggaacagcaatacgccgaggag
cagaggcggcaggcagagatggaggagcagaggcagcaggctgaaaggcaggtgtcagtg
gagactcctcagtaccaaagacattatgagcgctatgaagtatctaaaacaatagaggat
cgagctggccatcctctcattgacaggcattatgagcgttatgaagtttctaaaaccatt
gaggagcaacctggccagtcatttgctgacaggaataagtccaagtcaacttcagaactg
aatgaattcaacacaatcagaaatggtacccagagcaagtattcagagaggtcctggaac
acgggtgagttgcagaagaagtctcagaaagagcacaacgtgtctgcagcagagttggag
agacagcaaattcttcaggaaatgagaaagaaaacatctctacacacggacagcagctgg
attaggcagcgcagttccagtgtacataaggagcccattagtctgtacagcagtagtatg
aggagaggggagtctttggacaatcttgattcttcaagaacaagctcgtggaggcaccac
tcatggctgaaccagtctgcctcctcttcatctctgtcctctagtcaagatctcagtcgc
ccggtgtccacttcaaaccgagcctacatgtgcactccttcctcgagcaaagcaccttct
gcggccgcctctgcgagagccccttccgtgtcccaggcagccccccgggctcagtctccc
ctctctgcttcccagccagggtcccagacacgcagcaggtcagtcagtgggaagaaaatc
tgttcatactgtaataacgttctgggcaaaggagcagccatgatcattgagtctcttggt
ctttgttatcatttacattgctttaagtgtgttgcctgcggatgcgaccttggaggatcc
cgctctggagctgaagttaggatccgaaacaacaaactcttctgcaacgactgctatatc
agatttaaaagtacaagttcaggaggaattggtttacttacagatcttaattaa
DBGET
integrated database retrieval system