Nipponia nippon (crested ibis): 104010933
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Entry
104010933 CDS
T05756
Symbol
EXOSC8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104010933 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nni03019
]
104010933 (EXOSC8)
Messenger RNA biogenesis [BR:
nni03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104010933 (EXOSC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
104010933
NCBI-ProteinID:
XP_009461399
LinkDB
All DBs
Position
Unknown
AA seq
316 aa
AA seq
DB search
MCGEGLSELALFSLKKVWLSAEISKALSSLIGWGVEKREEVDGGYRTVEPLEYYRRFLKE
NCRPDGRELGEFRATTVNIGSITTADGSALVKLGNTTVICGVKAELAAPAVDSANKGYIV
PNVELPSLCSTRFRSGPPGEEAQAASQFIADVIENSQIIAKEDLCIANGKLAWVLYCDII
CLDYDGNILDASAFALLAALKNVQLPSVTINEETGLSEVNLKQKNPLIIRKHPVATSFAI
FDDTLLIVDPTAEEEDLATGTVTIVTDDEGRLCSVHKPGGSPLTGAKLQDCITRAITRHK
EVKKLIDKVIKSIKPK
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgtgcggggaggggctgagcgagctggctttgttcagcctaaaaaaggtatggttaagc
gcagagatcagtaaggccttgagctctctaatagggtggggtgtggagaagagagaagag
gtagacggtggatacagaacagtggaaccattggaatattacagaagatttttgaaagag
aactgtcgacctgatggaagggagttaggtgaattccgggcaaccactgtcaacataggt
tcaattacaactgcagatgggtctgccctggtgaagttaggaaatactacggtgatctgt
ggagttaaagcggaacttgctgcacccgcagtagattctgctaataagggatatattgtt
ccaaatgtagaactgccatccctctgttcaacgaggtttcgctctggaccacctggtgaa
gaggctcaagcagcaagccagttcattgcagatgtgattgaaaattcacagataatagcg
aaagaagatttatgtattgcaaatggcaagcttgcctgggtgttatactgtgatatcata
tgtctggactatgatggaaacattctggatgccagtgcctttgctttgttagcagcatta
aaaaatgtgcagttgccatcagttactataaatgaagaaactggtttatcagaagttaat
ttaaaacagaagaatcctttgattatcagaaagcatccagttgccacatcatttgctata
tttgatgacacattactcatcgttgatccaactgccgaagaagaagacttagcaactgga
actgtaactattgtaactgacgatgaaggcagactgtgttctgtccataaaccaggtgga
agtcctcttacaggagccaagcttcaggactgtatcaccagagcaattacaagacacaaa
gaagtaaagaagctgatagacaaagtcataaaaagtataaagcccaagtga
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