KEGG   Nipponia nippon (crested ibis): 104011099
Entry
104011099         CDS       T05756                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
nni  Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:nni00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:nni01009]
    104011099 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nni03036]
    104011099 (KDM5B)
Enzymes [BR:nni01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     104011099 (KDM5B)
Protein phosphatases and associated proteins [BR:nni01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     104011099 (KDM5B)
Chromosome and associated proteins [BR:nni03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    104011099 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 Exo70_N PHD_2 PHDvar_NSD Lipoprotein_20 zf-PHD-like
Other DBs
NCBI-GeneID: 104011099
NCBI-ProteinID: XP_009461581
LinkDB
Position
Unknown
AA seq 1524 aa
MSGGFDLPRAFASRCPVDATLGCRTVLIWERAWAGDGCRETGANSLCRSDWQPPFACDVD
KLHFTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKILDLFQLNRLVAE
EGGFDVVCKERKWTKIATRMGFAPGKAVGSHIRAHYERILYPYNLFQSGASLLCLQKPDL
TSDTKDKEYKPHDIPQRQSVPPSETCPPARRAKRLRAEATNIKTESDPPEARTHNLRRRM
GCAPPKCENEKEMHGTVKLPEKREHAGEPEKDKSKVRSKKPTNAVDLYVCLLCGSGNDED
RLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCLAQECNKPQEAFGFEQAARDYTLRTF
GEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPVRG
GKFKVRPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIED
HWSYSINYLHWGEPKTWYGAPGYAAEQLEDVMKKLAPELFESQPDLLHQLVTIMNPNTLM
AHGVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLN
RYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIEDEKRLREKVDKLGVTNSERVAF
ELFPDDERQCLKCKTTCFMSAVYCPCKPGLLVCLYHVEDLCSCPTYKYKLGYRYTLEELY
PMMNALKMRAESYNEWASNVNEALEAKINNKRSLISFKALIEESEMKKFPDNDLLRHLRL
VTQDADKCASVAQQLLNGKRQTRYRSGGGKCQNQLTVNELRLFVRQLYALPCVLSQTPLL
KDLLDRVEAFQQQSQKLLSIEMPSAAELQELLDVSFDFDVDLPQLAELRIRLEQARWLED
VQLASSDQNSLTLDDMRRLIDSGVGLAPYPAVEKAMAKLQELLTVSEHWDDKARNLIKAR
PRQFLSSLVAAVKEIEEIPAYLPNGVALKDAVQKAKDWLQEVEALQVGGRVPVLDTLVEL
VTRGRSIPVHLDYLPRLEALVSEVQAWKECAANTFLCENSPYSLLEVLCPRCDIGILNLK
RKQKKLKEPVPSGKKKSTKLETLSDLERALSESKDTASAMATLGEARLKEMEALRSLRAA
NEVKVLATEEDAELKVCLCQKEPAAPMIQCELCRGFFHTGCVSVPNILQGPRVWLCPHCH
RSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQMLYSGNIKLIQDKV
GSGLLYNRWQATAGQLPETNKVSQTIGAMSFSMPHDWDNRTIYLHSPFSTGQHCIPLHVI
STELDELMMEAQLLQVSLPEIQELYQILFTKQSPVLPTEQRSSVGPANEKNECCRGKKDG
ISYMERKLKRRFERESFYDEKRARVKKMRTPKKKKLKLNHSKDLCTNKLERERERLFEVQ
RSSESHLLPSDMSFSEQEDSEDEDAICPAVNCLQPEGDEVDWVQCDGSCNQWFHQVCVGI
SPEMAEKEDYICVSCTGKDSQYRK
NT seq 4575 nt   +upstreamnt  +downstreamnt
atgtcgggtgggtttgacctgcccagggcgttcgcctctcgctgtccggtggacgcgacc
ctcggctgtcgtacggttctcatttgggaacgggcctgggcaggtgacggctgtcgtgag
accggggcgaacagcctgtgccgcagcgactggcagcctccatttgcgtgtgatgttgat
aagcttcactttacaccgaggatccagaggctcaatgaactagaggcccaaactcgtgta
aagctgaattttctggaccagattgcaaagttttgggagcttcaaggatgtacgctgaaa
attccccatgtggagaggaagatcttggatttatttcagctcaacagactagttgcagaa
gaaggaggatttgatgtagtttgcaaggagagaaaatggaccaaaatagccactaggatg
ggatttgctcctggcaaagctgtgggttcgcacatccgtgcacattacgagcgcattctg
tatccttacaacttattccagtctggagcgagcctattgtgcttgcagaaaccagatctc
accagtgacacaaaggacaaggaatataagccccacgatattccacagagacagtctgtt
ccgccgtctgaaacttgtccaccagctcgtcgagcaaaacgcctaagagcagaggcaacc
aatattaaaactgaatctgaccctccagaagccagaactcataatctgagacgtcgaatg
ggatgtgcacctccaaagtgtgagaatgaaaaggaaatgcacggcacggtgaaacttccc
gagaagagagaacatgccggggagccagagaaagacaaatccaaagtccgatctaaaaaa
cccactaatgctgtggatttgtatgtctgtctcttatgtggcagtggtaacgatgaggac
cggctcctgttgtgtgatggctgcgatgacagttaccatactttttgtttaattccaccc
cttcatgatgttcccaaaggggactggaggtgtccccagtgtttggctcaggagtgcaat
aagcctcaagaagcatttggttttgaacaagcggcaagagactatacactccgcacgttt
ggagaaatggcagatgcgttcaagtcagactattttaacatgccagtacacatggtcccc
accgagctggttgaaaaagaattctggagactcgttagtaccattgaagaagatgtgaca
gtagaatatggagctgatattgcttcaaaggaatttggcagtggcttcccagtgaggggt
gggaaatttaaagttaggccagaagaagaggaataccttgatagtggctggaatttaaac
aacatgcctgtgatggagcagtctgttcttgctcacatcactgcagacatatgtggaatg
aaattaccctggctgtatgtaggaatgtgcttttcttcattttgttggcatatagaagac
cactggagctattcgattaactatctgcattggggggagcctaaaacgtggtatggagcc
ccagggtatgcagctgaacagctggaggatgtaatgaagaagcttgctccagagctcttt
gaatctcagccagatctcttgcaccaacttgtcaccataatgaacccgaatactttgatg
gcccacggagtgcctgtttaccgaaccaaccagtgtgctggggagtttgtgatcaccttt
ccaagagcttatcacagtggcttcaatcagggtttcaattttgccgaagccgtgaacttc
tgcacagttgattggctgccattgggccgccaatgcgtggaacattaccgcctgctaaac
cgttactgtgtgttttctcatgacgagatgatctgtaaaatggcttccaaagcagatgtt
cttgatgttgtggtagcatctacagttcagaaagacatggctattatgattgaagatgag
aagaggttgcgtgagaaggttgataaactgggagtgaccaactcggagagggtggctttt
gagctctttcctgacgacgagcgccagtgcttgaagtgtaaaaccacctgcttcatgtct
gccgtttactgtccgtgtaaacctggattattggtatgcttgtaccatgtcgaggatctc
tgttcctgtcccacctacaagtataaactggggtaccgctataccctggaggagctctat
ccaatgatgaacgcgctcaagatgcgtgcagaatcgtacaatgaatgggcttccaacgtt
aacgaagctctggaggcaaaaattaacaataaaagaagtctcatcagttttaaggctttg
atagaagaatcggaaatgaaaaagtttccggacaatgatctactgcgacacctcagactg
gttacgcaggacgcagacaaatgtgcctcggttgcacagcagcttctcaatggcaaaaga
caaaccaggtaccgctccggaggaggaaagtgtcaaaatcagctgactgtgaacgagctc
cggttgttcgtcaggcagctgtacgccctaccctgtgtcctcagtcagacgccattactg
aaggatcttcttgatcgcgtggaagcttttcaacagcaaagccaaaaactcctttccata
gaaatgcctagtgctgcagaacttcaggagctgttggacgtcagctttgacttcgacgtt
gatctgccccaactggctgaactgcggatacgtctggaacaggcacgctggctcgaggat
gtgcagctggcttcctcggaccaaaactctcttactctcgatgatatgagacgtcttata
gactcaggtgttggactggctccctacccggcggttgagaaagcaatggcaaagctgcag
gagctcctgactgtatctgaacactgggatgacaaagccaggaatctgataaaggccaga
ccacggcagtttctgagcagtctggtagcagcagtgaaggaaatagaggagatcccagcc
tacctcccgaatggtgtcgcgctgaaagacgcggtacagaaggccaaagactggctgcag
gaggtggaggctctgcaggttggaggacgcgtgcctgtcctggacacgctagtggaactt
gtcacaagaggtcgatctattccagtgcacctggactacctgccgaggctggaggccttg
gtgtcggaagttcaggcgtggaaggagtgcgcagctaacacgtttctgtgcgagaactcc
ccttattctcttctggaggtgttatgtccccggtgtgatattggaatactgaatctgaag
agaaagcagaagaagctgaaggagccagtgccaagtggaaagaagaaaagcactaagcta
gagactctgagtgacttagaaagagctctctccgagagcaaagatactgcatctgcgatg
gctacgcttggggaggcccggttaaaggagatggaagcattgcgttctctgcgagcagca
aacgaggtgaaggtgctggctactgaagaggatgcggaactgaaagtctgtctgtgccag
aaggagccggccgctccgatgatacagtgcgaactctgcagagggttcttccacaccggc
tgtgtttcggtgcccaacattttgcagggacctcgtgtgtggctctgtccgcactgtcat
cgatccgaaaagccacctttagaaaagatcttaccgttgctggcctccttgcagcgcatc
cgcgtgaggcttcctgagggggatgccctacggtatatgatcgagagaactgtgaactgg
cagcacagagcacaacaaatgttgtattcagggaatataaaacttatacaagacaaagtt
ggctcaggattattgtacaacagatggcaagccacagcaggccaattgccggagacaaac
aaggtttcccagacaattggagctatgtcattctccatgcctcatgactgggataacaga
accatatatttacattctccattttctacaggacagcactgcatcccactccatgtcatt
agcacagagctggatgagctgatgatggaagcccagctgctacaggtttctctgcctgaa
atacaggagctgtaccagatcctgttcacaaagcaaagccctgttctgccaacggagcag
aggtcatccgttggaccggcaaatgaaaagaatgagtgttgccgaggaaaaaaggatgga
attagttacatggagagaaaactaaagcggcgttttgagagagagagcttctatgatgag
aagagagcaagagtaaaaaaaatgagaacacccaaaaagaagaaactgaaactgaatcac
tcaaaggatctctgcactaacaaactggagcgagagcgggagcgtctctttgaggtgcag
cgttccagcgaaagccacttgcttccctcagacatgtcattctctgagcaggaggactct
gaggatgaagatgccatctgccctgctgtgaattgtctccagccggagggagatgaggtg
gattgggtccagtgcgacggcagctgcaaccagtggttccaccaggtgtgtgtgggcatc
tctccagaaatggcggagaaggaggactacatctgcgtcagctgcactgggaaggactct
caatatcggaagtaa

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