Nipponia nippon (crested ibis): 104011113
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Entry
104011113 CDS
T05756
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nni03000
]
104011113 (PRDM1)
Transcription factors [BR:
nni03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
104011113 (PRDM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
SET
zf-C2H2
Zf-C2H2_ZNF451_C
zf-C2H2_4
zf-C2H2_6
zf-C2HE
STL11_N
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
104011113
NCBI-ProteinID:
XP_009461597
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MKMDMEDADMTLWTEADFEEKCTYIVNDHPLDPSADGGTLTQAEASLPRNLTFKYASNCK
EVTGVISKEYIPKGTRFGPLIGEIYTSDTVPKNANRKYFWRIYSSGELHHFIDGFNEDKS
NWMRYVNPGYSVQEQNLAACQNGMNIYFYTIKPIPANQELLVWYCRDFAERLHYPSSREL
TMMNLTQTHVNPKQHSAEKDELYQKSIPKKEHSVKEILKMESSPPKGKDLFQTNISPVTP
EKDLDDLRKNYSPERCFFPRVVYPIRPHIPEDYLKASLAYGMDRPSYITHSPIQTSTTPS
PSGRSSPDQSLKSSSPHSSPGVTVSPLAPTSQEHREPYSYLNGSYGSEGLGSYPGYAPPG
HLPPAFLPSYNPHYPKFLLPPFNMSCNNLSALNNINGINNFNLFPRMYPLYGNLLSGSGL
SHPMLNPTTLPSSLPSEGGRRLLQPDHPRDFLIPAPNSAFSITGAAASMKDKPCSPTSGS
PTAGTAASSEHIMQPKPTSVVLAATGGEEAMNLIKSKRNVTGYKTLPYPLKKQNGKIKYE
CNVCSKTFGQLSNLKVHLRVHSGERPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVC
HKXXXXXXXXXXXSSTSNLKTHLRLHSGEKPYQCKLCPAKFTQFVHLKLHKRLHTRERPH
KCIHCHKSYIHLCSLQVHLKGNCPVAPASGLSMEDLNRINEEIEKFDISDNADKLEEVED
NIDLTSIVEKDILTMLRREMEGANLKVSLQRNLGNGLISSGCNLYESSDMSIMKLPHGHP
LPLLPVKVKQETVEPMDP
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggacatggaggatgctgacatgactctgtggacggaagccgattttgaagag
aagtgcacgtacattgtaaatgatcacccattggatcccagtgccgacggaggcacccta
actcaggcagaggcttccttgccaaggaacttgactttcaaatacgcatccaactgcaaa
gaggtcactggagttataagcaaagagtacatcccaaaaggaacgcgctttggacccctg
ataggagagatctataccagcgatacggttcccaagaatgcgaacagaaaatacttttgg
cggatctattcaagtggtgagcttcaccacttcattgacggatttaacgaggacaagagc
aactggatgcgttatgtaaaccctggctactctgttcaggaacagaacttggctgcttgt
cagaatggaatgaacatctacttctacaccatcaagcccatccctgccaaccaagagctg
cttgtgtggtattgccgagactttgcagagaggctgcactatccctcctccagagagctg
acaatgatgaacctcacacaaacacacgttaatccaaagcagcacagtgctgaaaaagat
gagctctatcagaaaagcatcccaaagaaggagcacagtgtgaaagaaatcctgaaaatg
gaatccagtcctccaaaaggaaaagacttgttccagaccaacatttcaccagttactcca
gaaaaagacttggatgatttgcgcaagaactatagcccggagaggtgtttcttccctcga
gttgtctacccgatccgacctcacattccagaagactatctgaaagcttccttagcatac
gggatggacagacccagctacattactcactcgcctatccagacgtctactacgccgagt
ccttccgggaggagcagcccagaccaaagtttaaaaagttcaagccctcacagcagtcca
ggggtcacggtttcgcctctggcacctacttcccaagagcacagagagccgtactcttac
ttgaatggatcgtatggctccgaaggattggggtcttatcctggatacgcaccccctggc
cacctcccacctgccttcctaccgtcctataacccccactaccccaaattcctgttacct
ccattcaatatgagctgtaataacctgagcgctttgaacaatatcaatggcatcaacaat
ttcaatctcttcccgaggatgtatcctctttatggcaacctgctcagcggaagtggcctt
tcccaccccatgttgaaccccaccacgctccccagttcattgcccagcgaaggaggccgt
cgattgctgcagcccgatcatccgagagacttcctcataccagcacctaacagtgccttc
tctatcacgggcgctgctgccagcatgaaggacaagccatgcagccccaccagcgggtca
cccacagctggtacagcagccagttcagaacacataatgcaacctaaacctacctcagtg
gtgttggctgccaccggcggcgaagaagccatgaatctcattaaaagtaagaggaatgtg
accggttacaaaacgctcccgtacccactgaagaagcagaatgggaagatcaagtacgaa
tgcaacgtttgctccaagacttttggccagctctccaatctgaaggtgcacctccgagta
cacagcggagagagaccatttaaatgccagacttgcaataaaggcttcacgcagctggct
cacctccagaagcactatctggtacacacgggagagaaaccccacgagtgtcaggtttgc
cacaagcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcagcagcaccagcaatctcaaa
acccacctgcgactccactctggagagaagccttaccagtgcaagctctgcccggccaaa
ttcacccagtttgtgcacctgaagctgcacaagcgtctccacacccgggaacgtccccat
aaatgcatccactgccacaagagctacattcacctctgcagcctccaggtccacctgaag
ggcaactgccctgtcgcccctgcctccggcctctccatggaggacctgaaccgaatcaac
gaggagatcgagaagttcgacatcagtgacaatgccgacaagttggaagaagtggaggac
aatatcgacttaacatcgatcgtggagaaggatatactgaccatgctcaggagggaaatg
gaaggagctaacctgaaagtatctctacagaggaacctgggaaacggacttatctcctca
ggatgcaacctttacgagtcgtcagatatgtcaattatgaagttgcctcacggtcaccca
ctacctctgttacctgtaaaggtcaagcaagaaacagttgaaccaatggacccttaa
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