Nipponia nippon (crested ibis): 104011264
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Entry
104011264 CDS
T05756
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nni03036
]
104011264 (CHD9)
Chromosome and associated proteins [BR:
nni03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104011264 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
104011264
NCBI-ProteinID:
XP_009461761
LinkDB
All DBs
Position
Unknown
AA seq
2880 aa
AA seq
DB search
MTDPMMDFFDDANLFSETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQDAQ
NQQKMSEFDQLNQYDSLKLHSVNQSFNSSADNVLSPHSQFNCSPIHPQNQSNGMFPDVAD
GSPMWGHQTATTVSNQNGSPFHQGHSQSMQQNKSFVAHHDFALFQANEPQHQCASLRSQQ
SRNNAGQDALSQPKDFMEVNVSTSHRVSVNHPPPVSNPSTSQQPLSVQPFSQTASASIHF
CGNQEGNFDGQSPTITPCSVNNSQQFSSPYSYSNNHISPTSLLQPTTALSTSQQTHSISD
FTGSDAFTSQTGTKQETTEHMLNPNTPLNSNSFQMLHSAHPQGNFSSSKLSPVNISFPAS
AGSASQISHFTDPIESNGFASLDDNLLHQVETHNEPFTGLDPDDLLQEDLLPQFDDSAFV
QDSTSHVLEHDLEHHITPQQVTQSSDLVRAQSQSQIHPWHSSVSNQHLQDRSRVTLQGQP
PSSKKTDGSGSYTKLQNTQVRAMSEKKQKKKADSESKQEKANRIISEAIAKAKERGERNI
PRVMSPENFPSVSAEGKEEKKGRKVKSKPKDKESKKPKTGSSSKIKEKTKIGKLIITLGK
KQKRKNESSDELSDAKQTPQRPLKDEDSQKRRSNRQVKRKKYAEEGEGKQSEEEAAKVSV
KIKKNSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRVIKKEISAGMTVETEEFFVKYKN
YSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVLEVS
LCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPP
NSWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEI
LLAGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRI
VRGTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKV
LLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRL
KEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRK
CCNHPYLIKGAEEKILGEFKETYSPSAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVL
IFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRVIDRFSKPDSDRFVFLLCT
RAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFD
RASLKLGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEED
IDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAIS
GRNSLVIDTPRIRKQTRPFSATKDELAELSEVESEGDDKPKLRRPCDRSNGYGRTECFRV
EKNLLVYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLIT
PTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKK
HIKHHCNKVLLRVRMLYYLKQEVIGNELQKVFDGIDASEIDVWVPEPDHSEVPAEWWDAD
ADKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYIDGDVEDPEYK
PAPAMFKDDIEDDVSSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKN
RQAQQIQPAFPIQTSMMQPPYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFD
PERGRFDWTKFRAMARLHKKTDESLEKYLYAFMSMCRRVCRLPSKEELVDPNVFIQPITE
ERASRTLYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHG
VSRTDYHILRDPELSFMSAQRNYNQNKVALSRTSTPLLHQYQMALSASPLTPQSRLSDAK
VNAFEDTKAKNENLKEDPQSSEEESMSTEETQTIMKSEPLSPKNGTPMQNTDHKPSVKTE
TDRRMVAARTEPLTPNPASKKQRVSKRGSDSSSDSDSDSDRSSCSSRSSSSSSSSSSSCS
HSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSDEEEAQKREGTPHIKAYDE
ESVASLSTTQDETQDSFQMNNGTPNSSYLLQGGYMLAASYWPKDRVMINRLDSICQTVLK
GKWPSARRSYDSNMVASFYTTKLLDSPGAAADYSEPSAPTPPLAGVKEEYDQSPQMSKEG
GLKLTFQKQGLSQKRPFESEEGALGQQQYLARLRELQNASEISLVNFPKSLPESGTSSHL
TASANGVVVDSQPVVKKRRGRRKNVEGVDVLFMNRNKQPNHVNPGINSCQVAAGINPALT
YTQSQGMLDAESPVPVINLKDGTRLAGDDAPKRKDLERWLKEHPGYVEDSGACIPRMQLH
DGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPLKDLCRFLKENPEY
GVAPEWGEVVKQSGFLPEGMFDRILTGPVVREEVSRRGRRPKSEIAKATAAAAAATAASV
SVNPLLANGLLPGVDLPSLQALQQNLQNLQSLQVTAGLMGMPAGLTTGGEAKNMAAMFPM
LLSGMAGLPNLLGMGGLLTKSTESISEEKKGSDSKEADIKKERTEDQNTDTGGENSVSSS
PSTSSAAAAANPLSLNPLLLSNILYPGMLLTPGLNLHIPALSQSNIFDVQNSESNDTGSA
KPTEEKEENSRVRDQEDKGGTEPSSHNENSTDEGSEKADASSGSDSTSSSSEDSDSSDED
NT seq
8643 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcctatgatggatttttttgatgatgccaatctttttagtgagaccttagaa
ggtttgtcagatgatgcctttgttcaacctggacctgtttcacttgttgatgaattgaat
ttgggtgcagaatttgaacctttgcacatagactcattgaaccatgtgcaagatgctcaa
aatcaacaaaagatgagtgagtttgatcagctgaatcagtatgattcactgaaacttcac
tcagtaaatcagtcttttaatagctcagccgacaacgtcttatcaccacactctcaattc
aactgttcaccaattcatccgcaaaaccagtctaatgggatgtttccagatgtggctgat
ggtagtcctatgtggggtcatcaaactgccacaactgtttcgaatcaaaatgggtcaccc
tttcaccaaggacattctcagtctatgcagcaaaacaaaagctttgtagcacaccatgac
tttgccttatttcaggctaatgaaccgcagcatcagtgtgcctcgctacggtcgcaacaa
agcagaaacaacgcggggcaagatgctctgagtcagccaaaagacttcatggaagttaac
gtttctacttctcacagagtcagtgttaaccacccacctccagtttctaatccatcaact
tcacagcagcctctgtctgttcaaccgttttctcaaactgcaagtgcttcaatacatttt
tgtgggaatcaagaaggaaattttgatggacagtccccaactattactccatgttctgtc
aataatagccaacaattttcatctccttattcttactctaataaccacatttctcctacc
agccttcttcagcctacaacagctctttctactagccagcagacacactctatctctgac
ttcactggaagcgatgcctttacatctcaaacagggaccaagcaagaaacaactgagcac
atgttgaatcctaatacacctttgaattcaaatagttttcaaatgttgcattctgcgcat
cctcagggcaactttagtagttcaaaactctctcctgtgaatattagttttccagcttct
gctggttctgcgtctcagataagccatttcactgaccctattgaaagcaacggttttgca
tctttagatgataacttacttcatcaggtcgagactcataatgaaccatttacaggactt
gacccagatgacctccttcaggaagaccttctgccacaatttgatgattctgcatttgtt
caggatagcacaagccatgttttagagcatgacctagaacaccatataaccccacagcaa
gtaacacagtcatctgatcttgttcgggcacagtctcaaagtcagatccatccttggcat
tcttcagtttctaatcagcatctgcaagacagaagtcgtgtaaccttacaaggacagcct
ccttcctccaagaagactgatggttcaggatcatatactaagttgcagaatacccaggtg
agggcaatgtctgaaaagaagcagaagaaaaaagcagactcggaaagtaaacaagagaag
gcaaatcgtataatatctgaagcaattgcaaaagcaaaagagagaggggagagaaacatt
ccacgagtaatgagtcctgaaaacttccccagtgtttcagctgaaggaaaagaggaaaag
aagggtagaaaagttaaatccaaaccaaaggacaaggagagcaaaaaaccgaaaactggt
tcctcatccaaaattaaagagaaaacaaaaattggaaagctaatcatcacactgggtaag
aagcagaaaagaaaaaatgaatcttcagatgaattatctgatgctaagcagactccacag
cggccattgaaagatgaagactcacagaagagaagatcaaatcgtcaagttaaaaggaaa
aaatatgctgaagaaggagaaggaaaacaatcagaagaagaagcagctaaagtttctgtg
aaaatcaaaaagaattctgcccctctaccngctgaacagcctttacaattatttgtggaa
aatccaagtgaagaagatgcagcaattgtagacaaaatcttatcctccagggtaataaag
aaagaaatatctgctgggatgacagtagaaacagaagagttttttgtaaaatacaagaac
tattcttatctccactgtgagtgggccacagaacaacagcttttaaaggataaaagaatc
cagcagaaaataaaacgattcaaactaaggcaagcacaaagagctcacttttttgcagat
atggaagaagaaccttttaatcctgactatgttgaagtagaccgggtattagaagtatct
ctttgtgaggataaggacactggtgagcctgttatttactatttagtaaaatggtgttcg
ttgccatatgaagacagtacgtgggagctgaaagaagatgtagatcaagcaaaaatagaa
gaatttgaacaattgcaagcttccaggcctgactcaaggagattggaccgaccacctcca
aactcctggaagaagatagaacagtccagggaatataaaaatggcaatcagctcagggaa
tatcaactggaaggacttaactggctcctattcaactggtacaataggcgaaattgcatt
ttagcggatgaaatgggtcttggcaaaaccattcagtcaattacattcctctatgaaatc
ctcctggctggtataagagggccttttctcatcatagctccgctttccactataacaaat
tgggaaagagaatttcgcacgtggactgaccttaatgttgtcgtgtatcatggcagtatg
atcagcaggcagatgattcagcagtatgaaatgtacttcagggactcccagggacgtatt
gttcgaggtacctacagattccaagccattatcacaacttttgaaatgattcttggtggg
tgtccagagctaaatgcaattgaatggcggtgcgttattattgatgaagctcacagactg
aagaacaaaaattgcaaactcttggaaggactgaaattaatgaaccttgagcataaagtg
ctgttaacgggtaccccactgcagaacacagtagaagaattatttagccttcttcatttt
cttgaaccattgcgttttcctgccgaatctacattcatgcaagaatttggagaccttaaa
acagaggaacaggttcagaaactacaagctatcctgaaacccatgatgctcagacggcta
aaggaagatgtagaaaaaaagctggctcctaaggaggaaaccataattgaagtagaactg
actaatattcagaagaaatattatcgagcgattttggagaaaaattttgctttcttatcc
aaaggagcagggcaagcaaatgtacccaatctggttaacactatgatggaactgagaaag
tgttgtaatcacccttatctcatcaaaggtgctgaagagaaaattcttggggagtttaaa
gaaacatatagcccaagtgctcctgacttccatctgcaagcaatgatccagtctgctggt
aaattggttcttattgataaacttcttccaaaaatgaaagcaggaggacacaaggtcctt
atcttctctcaaatggtgcgctgccttgatattttggaggattaccttatacataaaaga
tacttatatgaacgaattgatgggcgagtgcgagggaatctcagacaagctgcaattgac
cgggtcattgaccgtttcagcaaaccagactccgatcgctttgtcttccttctgtgcacc
agagctggtggtttgggcattaatttgactgcagcagatacgtgtataatttttgattct
gactggaatcctcaaaatgatctgcaggctcaagcccgttgtcacaggattggtcagaac
aaagcggtgaaggtctacagactgataacgcgcaactcctatgagagagagatgtttgac
agagcgagtctgaaactgggactggataaggctgtcttacagagtatgagtggaagagaa
aacagtgtcggtggtatccaacaactctccaaaaaagaaatagaagatttgcttcgaaga
ggtgcatatggtgccattatggatgaagaagatgaaggctctaaattctgtgaagaagac
attgaccagattttgcagcgtcgtactaaaactatcacaattgaatcagaaggaaggggc
tccacgtttgccaaggctagttttgttgcatctggaaacaggactgatatttcactagat
gatcccaacttctggcagaaatgggccaaaaaagcagaaatagatatagatgctatcagt
ggtagaaacagcctggttattgataccccaagaattagaaaacaaacacggccctttagt
gctacaaaagatgagctggccgagttgtctgaagtggagagcgagggtgatgataaacca
aaactccgcaggccttgtgaccgttccaatggatacggaagaacagagtgctttcgggtg
gaaaaaaacttgctggtctatgggtggggtcgatggagagaaattttgtcacatggtcgc
ttcaagagacagctgaacgaacaggatgtggagataatttgccgagctctattagcctat
tgtcttgttcactacagaggggatgagaaaataaaaagttttatatgggatctcattacc
ccgacagaggatgggcaaacaagagagttacagaatcaccttggcttatcagctcctgtg
cctagaggaagaaaaggaaaaaaagtgaagacccaggctagcactttcgatatacacaaa
gcagaatggcttcggaaatacaatccagaacatctgttgcaagatgaaggatacaaaaag
cacataaaacaccattgcaacaaggtcttgcttcgagtaagaatgctgtattacttaaaa
caagaagtcattggtaatgaattgcaaaaggtgtttgatggaattgatgccagtgaaatt
gatgtttgggtccctgagccagatcactctgaagttcctgccgagtggtgggatgcagat
gcagataaatcccttctaattggagtttttaaacatggttatgagaaatacaatactatc
agagcagacccagcgctgtgcttcttggaaagggttggcaagccggatgaaaaagcagtt
gcggctgaacagagagcaaatgattatattgatggggatgtagaagatccagaatataaa
ccagcaccagcaatgtttaaagatgacatagaggatgatgtttcatccccaggtgatcta
gtaatagcagacggagatggacaaatgatggaaggagacaaaatctattggcccactcag
tctgccttaacaacacgtcttcgccgcctaataacagcttatcaacgaacaagtaaaaat
aggcaggcccagcagatccagccagcattcccaatacaaactagtatgatgcagcctcca
tatgaagaagctgctctaaatccaaagatggctgctaagattgaaagacagcaaagatgg
acgagaagagaagaagctgacttttacagagttgtgtccacatttggagtggtgtttgat
cctgaaaggggacgatttgattggaccaaatttagagcgatggctagactacataagaaa
actgatgagagcttagagaagtacttgtatgcgtttatgtcaatgtgccggagagtctgt
cgtctcccctcaaaagaagaactcgtagacccaaacgtttttatccaaccaattacagag
gagcgtgcttctcggactttgtatcgcattgaactcctaaggaaagtgagagaacaggct
cttagacacccacagttgtttgaacgactaaaactatgccagccaaacccagacttacct
gtctggtgggagtgtgggactcatgacagggatttacttattggagctgctaaacatgga
gttagcaggacagattatcatattcttcgtgatcctgaactctcatttatgtccgcccag
aggaactataatcaaaataaagtggcactctcaaggacttctactccactgttgcatcag
taccagatggcattatctgcttctcctcttacacctcagtcaagattgtcagatgctaaa
gtgaatgcttttgaggacacaaaagctaaaaatgaaaatctgaaagaggaccctcagtct
tctgaagaggaatctatgtctacagaggagacccagacaataatgaaatctgaacctttg
agtccaaaaaatggcacaccgatgcaaaatacagaccacaaacctagcgtgaagactgaa
acagacaggcgcatggtggcagcaaggacagagcctctaactccaaacccagcttccaaa
aaacagagagtcagcaaaaggggatctgactctagctctgactctgactctgactcagat
agatcatcctgttcttccaggtcatcttcttcatcctcttcgtcttcctcatcttgttca
cactctcgatcaggctctagctcttcatcatcttcatcttgttcttcagcatcttcatcc
tcctcctcatcatcctcatcatcgtcatcgtcatcatcatcatcgtctgaagagagtgat
agtgatgaagaggaggcacaaaaacgtgaaggaaccccgcatataaaagcatatgatgaa
gagagcgtagcctctctgagtacaacacaagatgagacgcaagacagtttccagatgaac
aacgggacaccaaattccagttatctcctacaaggtggatacatgttggctgcttcctac
tggccaaaggatcgagttatgattaatcgacttgatagcatttgtcagacagtgttgaaa
ggtaaatggccttcagcaagaaggagctatgacagcaatatggtggcatctttctacaca
accaaacttctggatagcccaggtgcagctgcagattacagtgaacccagtgcaccaaca
ccccctcttgcaggtgttaaagaagagtatgatcaatcaccacagatgtcaaaggaaggt
ggtttgaaattgacttttcagaagcagggactgtctcagaaaaggccatttgaaagcgag
gaaggtgcattgggacagcagcaatacctggctcggctacgtgaactccagaatgcttca
gaaatcagccttgtcaacttcccaaaatcacttcccgaatcaggtacttccagtcactta
acagccagtgccaatggagttgtagttgacagtcagcctgtagtcaaaaagagaagagga
agaaggaagaatgtggagggagttgatgtcctctttatgaatagaaataaacagcctaat
catgttaatccaggtattaactcctgtcaagttgctgcaggaataaacccagcactcact
tacacgcagtcccaaggcatgcttgatgcagagagtccagttcctgttattaacctaaaa
gatggaacaaggcttgcaggtgatgatgcccccaaaaggaaagatttagaaaggtggctt
aaagaacatcctggatatgttgaagattcaggagcttgtattcctcggatgcagctgcac
gatgggaggcccaagcaaaaaaggcaccgttgtcgaaatcctaataaactggacgttaat
agtttgactggtgaagaacgtgttcagctcataaatagaagaaacgcaagaaaggtgggg
ggtgcgtttgctccccctctgaaggatttgtgcaggttcttgaaagaaaatccagagtat
ggagtggctcctgaatggggagaagttgtaaaacaatctggatttcttccagaaggtatg
tttgaccgtattctcactggacctgttgtgcgggaagaagtaagccggagaggaaggcgc
cccaaaagtgagattgctaaggcaacagcagctgcagcagctgccaccgctgcaagcgta
tcggttaaccccctgctagctaatggattgcttccaggagtggatctgcctagtcttcag
gccttacaacaaaacctgcaaaacctgcagtcactgcaagtaacagcaggattaatggga
atgccagctggcttaactactggaggagaagcgaagaacatggccgccatgttccccatg
ctgctgtcagggatggctggattaccaaacttgctgggcatgggaggacttctaacaaag
tctacagaatctatttcagaggaaaaaaagggaagcgattcaaaggaggcagatataaag
aaagaaaggacagaagaccaaaatacagatactggtggtgaaaactctgtttcaagttct
ccttcaacatcctctgctgctgcagctgccaatcctctctctcttaacccattacttctg
tccaacatactttacccagggatgcttctcactccaggccttaatcttcatatcccagct
ttgtctcagtctaatatttttgatgtacagaacagtgaaagcaatgacacaggctcagcc
aagcccacagaagaaaaggaggaaaattctagggttagagatcaggaagacaaaggggga
acagagccaagctctcacaatgaaaacagcacagatgagggttcagagaaagcagatgct
tcatctggatctgatagtacatcgtcttcatctgaggattcagattctagtgatgaagac
tga
DBGET
integrated database retrieval system
