Nipponia nippon (crested ibis): 104011280
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Entry
104011280 CDS
T05756
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104011280 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nni04131
]
104011280 (VPS35)
Membrane trafficking [BR:
nni04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
104011280 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
104011280
NCBI-ProteinID:
XP_009461781
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MKRCLDKNKLMDALKHASNMLGELRTSMLSPKSYYELYMAISDELHYLEVYLTDEFAKGR
KVADLYELVQYAGNIIPRLYLLITVGVVYVKSFPQSRKDILKDLVEMCRGVQHPLRGLFL
RNYLLQCTRNILPDEGEQADEETTGDISDSMDFVLLNFAEMNKLWVRMQHQGHSRDREKR
ERERQELRILVGTNLVRLSQLEGVNVERYKQIVLPGILEQVVNCRDALAQEYLMECIIQV
FPDEFHLQTLNPFLRACAELHQNVNVKNIIIALIDRLALFAHREDGPGIPADIKLFDIFS
QQVATVIQSRQDMPSEDVVSLQVSLINLAMKCYPDRVDYVDKVLETTVEIFNKLNLEHIA
TSSAVSKELTRLLKIPVDTYNNVLTVLKLKHFHPLFEYFDYESRKSMSCYVLSNVLDYNT
EIVSQEQVDAIMNLVSTLIQDQPDQPAEDPDPEDFADEQSLVGRFIHLLRSDDPDQQYLI
LNTARKHFGAGGNQRIRFTLPPLVFAAYQLAFRYKENSKVDDKWEKKCQKIFSFAHQTIS
ALIKAELAELPLRLFLQGALAAGEIGFENHETVAYEFMSQAFSLYEDEISDSKAQLAAIT
LIIGTFERMKCFSEENHEPLRTQCALAASKLLKKPDQCRAVSTCAHLFWSGRNTDKNGEE
LHGGKRVMECLKKALKIANQCMDPSLQVQLFIEILNRYIYFYEKENEAVTIQVLNQLIQK
IREDLPNLESTEETEQINKHFHNTLEHLRLRRESPESEGPIYEGLVL
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgaagagatgcttggacaaaaacaagctcatggatgcactgaaacatgcttccaacatg
cttggtgagctgcggacttctatgttatctccaaagagctattatgagctctacatggca
atttctgatgagctacactacttggaagtctacctgacagatgaatttgccaaaggaagg
aaagtggcagacctttatgagctagtacagtacgctggaaatattattccaagactgtat
ctcctgataacagtaggtgttgtctatgtcaagtcatttccacagtccaggaaagatatt
ttgaaagacctggtggagatgtgccgtggagtacagcatcctcttagaggcctctttctt
agaaactatctcctgcagtgtaccaggaatatcttaccagatgaaggcgagcaagcagat
gaagaaaccactggagacatcagtgattcgatggattttgtgctgctgaactttgctgag
atgaacaaactttgggttcgaatgcaacaccagggccatagtcgggacagagagaaaagg
gagcgagaaaggcaggaactgagaatcctagtaggaacaaacctggttcgcctcagtcag
ttggaaggtgttaatgtggagcgatataagcagattgttctgcctggaatattggagcaa
gttgtaaactgtagagatgctttagctcaggagtacctcatggagtgcatcatacaggtt
ttcccagatgaatttcacctccaaaccctgaacccatttctcagagcctgtgctgagctg
caccaaaatgtgaatgtgaaaaatataattattgctttaattgacaggttagctttattt
gcacatcgtgaagatggacctggtatcccagcagatatcaaactgtttgacatcttttca
cagcaggttgctactgttatacagtctcggcaggacatgccctcagaggatgtggtatct
ttgcaagtttctctcattaacttggctatgaaatgctacccggaccgtgttgactatgtt
gataaggtgttggagacaaccgtggaaatattcaataaacttaatctggaacatattgca
acaagcagtgctgtttcaaaggagctgactagacttttgaaaatccctgttgatacttac
aacaatgtcctgacagttctgaaactaaaacattttcacccactctttgaatactttgat
tacgagtccaggaagagcatgagttgttacgtgcttagcaatgtattggattataacaca
gaaattgtgtcccaagaacaggttgatgcgatcatgaatttggtatccacgctgatccag
gatcaaccggatcagcctgctgaagatcctgaccctgaggactttgctgatgagcagagt
cttgtgggaagatttattcatctcttgcgttcagatgaccctgaccaacagtatctgatc
ctaaacactgcccggaaacactttggtgcaggtgggaaccaacgcatacgttttacactg
ccaccattggtttttgctgcataccagcttgcttttcgctacaaagagaactccaaagtg
gatgacaaatgggaaaagaagtgccagaagatcttctcgtttgctcatcagaccatcagt
gctctgatcaaagcagaactggcagagctgcctctccgtctcttcctacaaggagcactg
gctgcaggagagattggctttgagaatcatgaaactgtggcctatgaattcatgtctcag
gccttctctctatatgaagatgaaatcagtgattcaaaagcacagctggctgcaatcacc
ttgataattgggacatttgagaggatgaagtgcttcagtgaggagaatcatgagcctttg
aggactcagtgtgcgctggcagcctctaagctccttaagaagccagaccaatgccgggct
gtgagcacttgtgcccatttgttttggtctggccgaaatactgacaagaatggagaggag
cttcatggaggaaaaagagtgatggagtgtctaaagaaggctctgaagatagcaaatcag
tgcatggacccttctctgcaagtccaacttttcatagaaattctgaatagatatatctat
ttttatgaaaaggaaaatgaggcggtgacaattcaggttttgaatcagcttatacagaag
ataagagaagatctcccaaaccttgagtctactgaagaaacagaacaaattaacaaacac
tttcacaacacactggagcacttgcgtctgaggagggaatcaccagaatctgaggggcca
atttatgaaggtcttgttctttag
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