Nipponia nippon (crested ibis): 104011942
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Entry
104011942 CDS
T05756
Symbol
ABCA1
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni02010
ABC transporters
nni04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104011942 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104011942 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nni02000
]
104011942 (ABCA1)
Transporters [BR:
nni02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104011942 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
104011942
NCBI-ProteinID:
XP_009462528
LinkDB
All DBs
Position
Unknown
AA seq
2263 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSKKKGTLPWIQGIICNANNPCFRYPTPGESPGIVGNFNASIVSRLFSDAKRLLLYSQQ
DTSMKDVQKVLGKLRKLGDSSGSDLKLRDFLVDNETLSDFLHHNVSMPSSAVEELLDAEV
NLQQVILSGYRMRLRDLCNSSTLSEFLTIQNQTGAMDSEAFICTLPKEKLHAAEQAFRAN
LNPLKPLQRRISFNSSLHDLSETVDALRESLGKLIKELLSMKSWSDMRQEVMFLNNVNAS
NSSTQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTEDDVTNFYDNSTTPY
CNELMKNLESSPLSRIIWRALKPLLIGKILYTPDTPAIRKVMTEVNRTFQELGVFRDLGG
MWEEISPKIWTFMESSQEMDLIRTLLKGKALWDLHLPASNWTVEDVARFLSNHPEDFETA
NVSVYTWVDAFNETDRAIQTVSRFMECVNLDKLEPVATEVRLINKSLELLDERRFWAGIV
FTEIAPNSLELPQHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQ
DVVEQAIIRVQTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMVLAWIYSVAVIIK
SIVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLMSAGLLVLILKMGNLLPYSDPSV
VFVFLSIFGVVTILQCFLISTVFSRANLATACGGIVYFTLYLPYVLCVAWQDYVSFSLKI
FVSLLSPVAFGFGCEYFALFEEQGVGVQWDNFFESPLEEDGFSITTSAVMMLFDTFLYGV
MTWYIESVFPGQYGIPRPWYFPFTKSYWFGEEPQDRQHPHPDQKGPSEVCKEEEPMHLSL
GVSIQNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTA
FILGKDIRSELSAIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLPEKKVKEEMEQMAM
DVGLPHKLKARTSKLSGGMQRKLSVALAFVGGSRVVILDEPTAGVDPYSRRGIWELLLKY
RQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSS
LSSCRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVPEARLVE
DIGHELTYVLPYKAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVD
AETSDGTLPARRNRRVFGDRQSCLRPFTEDDAFDPNDSDIDPESRETDLLSGMDGKGSYQ
MKGWKLTQQQFMALLWKRLLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLE
LQPWMYDEQYTFISNDAPEDAGTQRLLDALLNKPGFGTRCMQGHSIPNTPCTMGQREWTT
ASVPDSVLDIFLKGNWSMENPSPSCECSNEKIKKMLPVCPPGAGGLPPPQREQDTADILQ
NLTGRNVSDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSWGASSSLMLPPSHEVTDAIKQV
KKILELTQGSSGDRFLNSLSSFMKGLDTKNNVKVWFNNKGWHAIASFLNVINNAILRANL
QQGKNPSAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQ
ERVSKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVIIIFICFQQKSYVSSSNLPVL
ALLLFLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTSNKLNN
INDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAV
EGVVFFLITVLIQYRFFIKPRPVYAKLPPVNDEDEDVSRERQRIISGGGQSDILEIRELT
KIYRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSIL
SNIQEVHQNMGYCPQFDAVNELLTGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYG
EKYAGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVV
LTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEEF
FGHAFPGSVLKEKHRNMLQYQLPSSPSSLARIFSILSQNKKRLHIEDYSVSQTTLDQVFV
NFAKDQSDDDHTKDLSLHKNQTVVDIAILNSFLQDEKVKESCV
NT seq
6792 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggacgcagctgggattgctgctatggaagaacttcacctacagaagaaga
cagactttccagctgctgatcgaagttgcctggcctctgtttatcttcttcatcctgatc
tctgtaagactttcatatccgccctacgagcagcatgaatgtcacttcccaaacaaagct
atgccttcaaaaaaaaaaggaaccttgccatggatacaggggatcatctgcaacgccaac
aacccttgtttccgctacccaactcctggggaatcccctggtattgttggaaacttcaat
gcctccatcgtttcccgcctgttctcagatgccaagaggttactcttgtacagccaacag
gacacgagcatgaaggatgtccagaaggtcctgggaaaactgcgcaagttgggagactcc
tctggctcagacttgaaacttcgggatttcctggttgacaatgagacgctctcagacttc
ctccatcataatgtgtccatgccatcatctgcagtagaggagctactggatgcagaggtc
aacctccagcaggtcattttgtctggttaccggatgcgactgagagatctctgcaatagc
tcaacactgtcggaatttcttacaatccaaaatcagacgggggccatggactctgaagct
ttcatttgcaccttgccaaaggaaaaactccatgcagccgaacaagccttccgtgctaac
ctgaatcctttgaagccccttcagagacgaatttctttcaattcctccttgcatgatctg
tcagaaactgtggacgctttgagagagagccttgggaagctcattaaagagttgctgagc
atgaagagctggagcgacatgaggcaagaggtgatgttcctgaacaacgtgaatgcctca
aactcctctacgcagatctaccaggctgtgtcgcgcattgtgtgcggccatcccgaaggt
ggagggctcaaaattaaatccctcaactggtatgaggataacaattacaaagcgctgttc
ggaggcaatggcactgaagatgatgtaactaacttctatgataactcgacaacaccctac
tgcaatgagctgatgaagaacctggagtccagcccgctttccaggattatctggagggct
ttgaaacccttgctgattgggaagatcttgtacactccagacacaccagccataaggaag
gtcatgactgaggtgaacaggacgttccaggagctgggtgtgtttcgtgacctcgggggg
atgtgggaggagataagcccgaagatttggacgtttatggaaagtagtcaggaaatggat
ctcattcggacgctactgaaaggcaaagctctctgggacctgcacttgccggcttccaac
tggacagtggaggacgttgcccgtttcctgtcaaaccatccggaggactttgagacagca
aatgtctcggtatatacctgggtggatgccttcaatgagacagaccgagctatccagact
gtctcgcgcttcatggagtgtgtcaacttggacaaactggagcctgtggccacagaagtc
cggcttataaacaagtcattggagcttctggatgaaaggaggttctgggctggcatagtc
ttcactgaaatagctcctaacagcttagagctccctcaacatgtgaaatacaagatacgt
atggacattgataatgtggaaaggaccaacaagatcaaggatgggtactgggatcctggt
ccccgggctgatccctttgaggacatgcgctatgtttggggaggctttgcctacctgcag
gatgtggtggaacaggccatcatcagggtgcagacaggcacggagaagaagacaggagtt
tatgtgcagcagatgccctatccgtgttatgtggatgacatatttctgcgtgttatgagc
cgctccatgcctctgttcatggttctagcctggatctactcagtggctgtgataattaag
agcattgtgtatgagaaggaagcccggctgaaggagacaatgaggattatgggacttgac
aacggcatcctttggctaagctggttcattagcagcctcatccctctcctgatgagtgca
ggcctgctggtgttgattcttaagatggggaacctgctgccttacagcgaccctagcgtg
gtgtttgttttcctctcgatcttcggtgtcgtgaccatcctccagtgcttcctcatcagc
accgtgttctccagggccaacctggcaactgcctgtgggggcattgtctatttcacactg
tacctgccttatgtgctgtgtgttgcctggcaggactacgtcagcttctcactcaagatc
tttgtgagcctgctgtctccagtagcctttggctttggttgtgagtactttgcactcttt
gaggagcagggagttggtgttcaatgggacaacttctttgagagcccgttggaagaagat
ggctttagcatcaccacatctgccgtcatgatgttgtttgacaccttcctatatggggtc
atgacctggtacattgagtctgtcttcccaggccagtacgggattcccaggccctggtac
tttcctttcacaaagtcctattggtttggcgaggaaccacaggacaggcagcaccctcat
cctgaccagaaagggccttcggaagtctgcaaggaggaagagcctatgcatctgagcctt
ggcgtttccatccagaacctggtcaaggtttatcgtgatggcaagaaagttgctgtagat
ggtctcacactgaacttctatgaaggacaaatcacttcctttctgggacataatggagca
gggaaaaccactactatgtccatcctgactggcttgttccccccaacctcgggtacagcc
ttcatcctgggcaaagacatccgctctgagctcagcgccatcaggcagaacctgggtgtc
tgtccacaacacaacgtgctgtttgacttgctgactgtggaggagcacatctggttctac
gctcgtctcaaagggctgccagaaaagaaggtgaaagaggagatggagcagatggcaatg
gatgttggtttgcctcacaaactgaaagctaggacaagcaaactctctggtggtatgcag
aggaagctctcagttgccttagcctttgttggtggctccagggttgtcattctggatgag
ccaacagctggggtggatccttattctcgcagagggatatgggaattgctcctgaagtat
cggcaaggccgcactatcattctctccacgcaccacatggatgaggcagacattctgggg
gaccggattgccatcatttctcatggcaagctctgctgtgttggctcttctctcttcctg
aagaaccagctgggaacaggctattatttgaccctggtcaagaaggacgtggattcctct
ctgagctcctgccgaaacagcagcagcacagtgtcctatctgaaaaaggatgatagtgtc
tcccagagcagctctgatgctggccttggcagtgaccatgaaagtgacacactgacaata
gatgtctctgcaatttcaaatctcattacaaaacatgttcctgaggccaggctggtggag
gacattggccatgaattgacctatgtcttgccatacaaggctgctaaagagggagctttc
gtggagctgttccatgagattgatgaccgtctttctgatcttggcatttccagctacggg
atctctgaaaccactctggaggagatcttcctgaaagtggctgatgatagtggcgtggat
gcagaaacctcagatgggacattgccagccagaaggaacaggcgtgtgtttggagacaga
cagagctgccttcgtccatttacagaagatgatgcatttgatcctaatgattcagacata
gatccagaatccagagagacagaccttctcagtggcatggatgggaaaggatcctaccag
atgaagggctggaagctcacccagcagcagttcatggctctgttatggaagaggctgctt
attgccaagagaagccggaagggcttctttgctcagattgtgctgccagctgtctttgtg
tgtatcgctctcatgttcagcctgatcgttcctccctttgggaagtatcccagcttggaa
ttacagccctggatgtatgatgagcagtacacttttattagcaatgacgcaccagaagat
gcaggcactcagaggcttttggacgcccttctcaataagcctggttttgggacacgctgt
atgcagggacactccatcccaaacactccttgcaccatggggcagagggaatggaccacc
gcttcagtcccagactcagtcctggacatcttcttgaaaggcaactggagcatggagaac
ccttccccgtcttgcgaatgcagcaatgagaagatcaagaagatgctgcctgtgtgcccc
cctggtgcaggtgggctgccaccgccacagcgcgagcaagacactgctgacatcctccag
aatctgacaggccggaatgtatcagactacctagtgaagacctacgcacagatcattggg
aaaagcttaaagaataagatctgggtgaatgagttcaggtatggcggcttttcctgggga
gccagcagttccctcatgcttcctccaagccatgaagtcactgatgccattaaacaggtg
aagaaaatcttggagctaacacaggggagttctggagatcggtttctcaacagcttgtca
agtttcatgaaaggcctggatacaaagaacaatgtgaaggtgtggttcaacaacaagggc
tggcatgccattgcctccttcctgaacgtgatcaacaatgccatccttcgggccaacctg
cagcagggcaaaaaccctagtgcttacgggatcactgccttcaatcacccactcaacctc
accaagcaacagctctctgaagtggccctgatgaccacctccgtggatgtcctagtctcc
atctgtgtgatctttgccatgtcctttgttcctgccagctttgtggtcttccttatccag
gaacgtgtcagcaaggctaaacacttgcagttcatcagtggtgtgaagcctgtgatctac
tggctggccaactttgtctgggatatgtgcaactacattgttccagccacgctagtcatc
atcatcttcatctgcttccagcagaagtcctatgtatcctcctccaacttgcctgtgctg
gctctccttctgtttctctatgggtggtccatcacccctctcatgtatccagcctccttc
gtgttcaaaattcccagcacagcatatgttgtgctgaccagcgtgaacctcttcattggc
atcaatggtagtgtggccacctttgtcctggagctcttcaccagcaacaagctgaacaac
atcaatgacatcctgaagtctgtcttcctcatcttcccccacttctgcctggggcgggga
ctcattgacatggtgaaaaaccaggcgatggctgatgctctggagaggtttggagaaaat
cgtttcgtgtcccctctgtcgtgggacctggttggaaggaacctctttgctatggcagta
gagggcgttgtcttcttcctcatcacagtgctcatccagtacaggttcttcatcaaacct
aggcctgtctacgccaagctgcctcccgtgaatgatgaagatgaggatgtatccagagag
agacagaggataattagtggaggaggacagagtgacatcttggaaatcagggagctgacc
aagatttacagaatgaagcggaagccagcggttgataggatctgtgttggaatcccccct
ggagaatgctttggactcctgggagtaaatggtgctggcaagtcatccacttttaagatg
ctaactggtgatacagatgtgacaggaggagaagctttcctcaaaggaaacagtatcttg
tccaacatccaagaagtccatcagaacatgggctactgcccacagtttgatgctgttaat
gaactgctgacagggcgagagcacttggagttcttcgcgctcctgagaggtgttccagag
aaagaagtctgcaaggttggcgagtgggcaattcggaaactgggccttgtgaaatacgga
gaaaaatatgctgggaattacagtggagggaacaggcgcaagctctccacagccattgcc
ctcattggagggccacctgtggtgttcctggatgagccaacaactgggatggatcccaaa
gcacgtcgtttcttgtggaactgtgctctgagtgtaatcaaagaggggagatcagtggtg
ctcacatctcacagcatggaagaatgtgaagccctgtgcactcgaatggcaataatggtc
aatgggcgattcaggtgtctgggcagcgtccagcatctaaagaacaggtttggagatggt
tacacgatagtggtaagaattgcaggggcaaacccagacctgaagcctgttgaggagttc
tttgggcatgccttccctggaagtgtcctgaaggaaaagcatcggaatatgctgcagtac
cagcttccctcttcaccatcctccctggccagaatattcagtattctctcccagaacaaa
aagagactccacatagaagactactccgtatctcagaccacacttgaccaagtatttgta
aattttgctaaggaccaaagcgacgacgaccacactaaggacctgtcattgcacaaaaac
cagactgtggtagacattgcaatccttaattccttcctgcaagatgagaaggtaaaagaa
agttgtgtgtga
DBGET
integrated database retrieval system
