Nipponia nippon (crested ibis): 104011984
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Entry
104011984 CDS
T05756
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104011984 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nni03021
]
104011984 (SMARCD1)
03036 Chromosome and associated proteins [BR:
nni03036
]
104011984 (SMARCD1)
Transcription machinery [BR:
nni03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104011984 (SMARCD1)
Chromosome and associated proteins [BR:
nni03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104011984 (SMARCD1)
PBAF complex
104011984 (SMARCD1)
GBAF(ncBAF) complex
104011984 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
104011984
NCBI-ProteinID:
XP_009462574
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MSAEPLRTPEESSVAASLRIQGAQLQQVQPQAVPNRNHNAKKKKMADKILPQRIRELVPE
SQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGT
VASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTAT
TQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYI
KTHKLQDPHEREYVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPND
QKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKIHETIETINQLKTQREFMLS
FARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRR
QELEQALGIRNT
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccgagcccctgcgcacgcctgaagagagctcggtggctgccagcctgaggatt
caaggagctcagctccagcaggtgcagccgcaggcggtccccaaccgcaaccacaacgct
aaaaagaagaagatggctgacaaaattctacctcagaggattcgtgaactcgtacccgag
tctcaggcctatatggacttgctggcctttgaaaggaaattggaccagacgatcatgagg
aaacgcctggatatccaggaggctttgaagcgacccattaagcaaaaacgaaagctacgt
atttttatctccaataccttcaatccagccaagtcggacgcagaggatggtgaaggaaca
gtcgcctcctgggagcttcgggtggaaggacggctgctggaagattctgctttgtccaaa
tatgatgccaccaagcagaaaagaaagttctcatccttctttaaatctctggtcattgaa
cttgataaagacctgtatggccctgacaatcacctagtagagtggcacaggactgctaca
actcaggagacggatggcttccaggtgaagagaccaggagatgtcaatgtgcgctgtact
gtccttctgatgctggattaccagcctccccagttcaaattggatccccgcttggctcgc
ctcttggggattcacactcagacccgtccagtgatcatccaggcactgtggcaatatatc
aagacccacaagctccaggacccccacgaacgggagtatgtcatctgtgacaaatacctc
cagcagatatttgaatcccagcggatgaagttctctgaaatcccacaaagacttcacgca
ttgcttatgcccccagaaccgatcatcattaatcatgtgatcagtgttgacccaaatgac
cagaagaaaacagcttgctatgacattgatgtggaggtggatgataccttgaaaactcag
atgaattcctttctgctgtccacagccagtcaacaggaaattgctgctctggataacaag
attcatgaaacaatagagacaattaaccagctgaagacccagcgtgagttcatgctgagc
tttgcccgagatcctcagggcttcatcaacgactggctacagtcccagtgccgggattta
aagacaatgactgatgttgttgggaatcctgaagaggagcgtagagctgagttctacttc
cagccgtgggctcaggaagccgtctgcagatacttctactccaaggtgcagcaaagacga
caggaattggagcaggccctgggcatccgtaacacatag
DBGET
integrated database retrieval system
