Nipponia nippon (crested ibis): 104012012
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Entry
104012012 CDS
T05756
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1 isoform X1
KO
K09444
interferon regulatory factor 1
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
104012012 (IRF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nni03000
]
104012012 (IRF1)
Transcription factors [BR:
nni03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
104012012 (IRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
104012012
NCBI-ProteinID:
XP_009462615
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MPVSRMRMRPWLEMQINSNQIPGLIWINKDKMMFQIPWKHAAKHGWDMEKDACLFRSWAI
HTGRYKVGEKNPDPKTWKANFRCAMNSLPDIEEVKDKSINKGSSAVRVYRMLPPLTKDQK
KERKSKSSREARNKSKRKSYEDMRMEESAERLTNTPLPDDHSGYTVHDYTGQEVDVESTS
ITLDLSPCEVSGSLTDWKSPMEITMADSTNDLYQLQVSPLASSSEVTDEDEEEMNSEIFK
LLEPAQDWHTTSVGGKGFLTNELGTQTMCSTYSYKEQDGEIDTTSGDLEFRFFDQKNSLD
FSWVETVRPTMQVISCGL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgccagtgtcaagaatgcgcatgaggccctggttggaaatgcagattaattccaatcaa
ataccaggactgatatggattaacaaggataagatgatgtttcaaatcccgtggaaacac
gcagctaagcatggctgggacatggagaaagatgcctgccttttccggagctgggccatt
catacaggaagatataaagtaggtgagaaaaaccctgacccgaaaacctggaaggcgaac
ttccgctgtgctatgaattcactgcctgacatcgaagaagtgaaggacaaaagcatcaac
aaaggctccagtgctgtcagggtttacaggatgctgccgcccttgacaaaggatcagaag
aaagaaaggaagtcaaagtcttcaagagaagcaagaaacaagagcaagagaaagtcgtat
gaagacatgaggatggaggagtcagcagaaagactaaccaacactcctctgccagatgac
cacagtggctacaccgttcacgactacacggggcaggaagtggacgttgagagcacgtcc
atcaccttagacctctccccgtgcgaggtgagtggctccctgactgactggaagtcgccg
atggaaatcaccatggctgacagcaccaatgacctctaccagctccaggtgtctcccctg
gcttcatcctcagaagtcacagacgaagatgaagaggaaatgaactcggagatttttaag
ttgcttgaaccagcccaagactggcacaccaccagcgttggggggaaaggctttctcacc
aacgagctgggcacgcagaccatgtgcagcacttacagctacaaggagcaggatggggag
atcgacacgacttcaggagacctggagttcaggttctttgaccagaaaaacagcctagac
ttctcctgggtggagacagtgagacctaccatgcaagtcatttcttgtggcttgtaa
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