Nipponia nippon (crested ibis): 104012250 Help Entry 104012250         CDS       T05756                                  Symbol COL1A1 Name (RefSeq) collagen alpha-1(I) chain   KO K06236   collagen type I alpha Organism nni  Nipponia nippon (crested ibis) Pathway nni04510   Focal adhesion nni04512   ECM-receptor interaction nni04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:nni00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     104012250 (COL1A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     104012250 (COL1A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     104012250 (COL1A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:nni00536]     104012250 (COL1A1) Glycosaminoglycan binding proteins [BR:nni00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    104012250 (COL1A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC TILa Motif Other DBs NCBI-GeneID:  104012250 NCBI-ProteinID:  XP_009462891 LinkDB All DBs Position Unknown AA seq 1453 aa AA seqDB search MFSFVDSRLLLLIAATVLLTRGQGEEDIQTGSCIQDGLTYNDKDVWKPEPCQICVCDSGN ILCDEVICEDTSDCPNAEIPFGECCPICPDTDASPVYPESAGVEGPKGDTGPKGDRGLPG PPGRDGIPGQPGLPGPPGPPGPPGLGGNFAPQMSYGYDEKAGGMAVPGPMGPAGPRGLPG PPGAPGPQGFQGPPGEPGEPGASGPMGPRGPAGPPGKNGDDGEAGKPGRPGERGPPGPQG ARGLPGTAGLPGMKGHRGFSGLDGAKGEPGPAGPKGEPGSPGENGAPGQMGPRGLPGERG RPGPSGPAGARGNDGAPGAAGPPGPTGPAGPPGFPGAAGAKGETGPQGARGSEGPQGARG EPGPPGPAGAAGPAGNPGADGQPGAKGATGAPGIAGAPGFPGARGPSGPQGPSGAPGPKG NSGEPGAPGNKGDTGAKGEPGPAGVQGPPGPAGEEGKRGARGEPGPAGLPGPAGERGAPG SRGFPGADGIAGPKGPPGERGSPGPVGPKGSPGEAGRPGEPGLPGAKGLTGGPGSPGPDG KTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKPGERGAPGPPGAVGAAG KDGEAGAQGPPGPTGPAGERGEQGPAGAPGFQGLPGPAGPPGEAGKPGEQGVPGDVGAPG PAGARGERGFPGERGVQGPPGPQGPRGANGAPGNDGAKGDAGAPGAPGGQGPPGLQGMPG ERGAAGLPGAKGDRGDPGPKGADGAPGKDGLRGLTGPIGPPGPAGAPGDKGEAGPPGPAG PTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGETGDAGAKGDAGPPGPAGPTGAPG PAGAVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNIGLPGPPGPSGKEGGKGPRG ETGPAGRPGEPGPAGPPGPPGEKGSPGADGPIGAPGTPGPQGIAGQRGVVGLPGQRGERG FPGLPGPSGEPGKQGPSGSPGERGPPGPMGPPGLAGPPGEAGREGAPGAEGAPGRDGAAG PKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPQGPAGPPGPAGARGPAGPQG PRGDKGETGEPGDRGMKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAAG KDGLNGLPGPIGPPGPRGRTGDVGPVGPPGPPGPPGPPGPPSGGFDFSFLPQPPQEKAHD GGRYYRADDANVMRDRDLEVDTTLKSLSQQIENIRSPEGTRKNPARTCRDLKMCHGDWKS GEYWIDPNQGCNLDAIKVYCNMETGETCVYPTQATIAQKNWYLSKNPKEKKHIWFGETMS DGFQFEYGGEGSNPADVAIQLTFLRLMSTEAAQNITYHCKNSVAYMDQDTGNLKKALLLQ GANEIEIRAEGNSRFTYGVTEDGCTSHTGTWGKTVIEYKTTKTSRLPIIDLAPMDVGAPD QEFGIDIGPVCFL NT seq 4362 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggattctcggttactgctgttgatagcagcgactgtactactcacc cgcgggcaaggagaagaagacattcaaactggaagctgcatacaggatgggctaacgtac aacgacaaggatgtgtggaaacccgaaccctgccagatctgcgtctgcgacagcggcaac atcctctgcgacgaggtgatctgcgaggacacctccgactgccccaacgccgagatcccc ttcggagagtgctgccccatctgtcccgacaccgacgcctcccctgtctacccagaaagc gctggagtagagggacctaagggagacaccggccccaaaggagacaggggactccccggc ccccctggcagagatggcatccctggacagcctggcctcccgggacccccaggccctcca ggtcctccaggccttggcggaaacttcgctcctcaaatgtcttatggctacgacgagaaa gctggcggcatggccgtgcctggccccatgggtccagctggtccccgtggtctccccggc cctcctggcgctcccggtcctcaaggtttccaaggtccccccggtgaacctggagagcct ggtgcttctggtcccatgggtccccgtggtcccgccggcccccctggcaagaacggagat gatggtgaagctggaaagcccggccgtcccggagaacgtggtccccccggcccccagggt gcacgtggtctcccaggaactgccggcctgccgggcatgaagggtcacagaggcttcagt ggtctggatggtgccaagggtgagcccggtcccgctggccccaagggcgagcccggcagc cccggggagaacggtgctcctgggcagatgggtcctcgtgggcttcctggcgaaagaggc cgtcccggtccatctggccccgctggtgctcgtggtaacgacggtgctcccggtgctgcc ggtcctcccggtccaactggccccgctggtccccctggcttccccggtgctgctggtgct aagggtgaaaccggtccccagggtgctcgtggcagcgaaggtccccaaggtgcccgcggt gagcccggtccccccggccctgctggcgctgctggtcctgctggcaaccccggtgctgat ggtcaacctggtgccaagggcgcaactggtgctcctggcatcgctggcgctcccggcttc cccggtgcccgcggtccctccggaccccagggtcccagcggtgcccccggtcccaagggt aacagcggtgaacccggtgctccaggcaacaagggagacactggtgccaaaggcgaaccc ggtcctgctggtgtccaaggtccccccggcccagctggtgaggaaggcaagagaggagct cgtggtgaacccggtcccgctgggcttcctggccctgctggcgaacgtggtgctcccggc agccgcggtttccctggcgctgatggcatcgctggtcccaagggtccccccggcgagcgc ggctcccccggccctgttggccccaaaggatctcctggtgaagctggacgccccggggaa cccggcctccccggtgccaagggtctgactggaggccctgggagccccggtcccgacggc aagactggtccccccggccccgctggtcaagatggccgccctggcccccccggccccccc ggagccagaggtcaagccggcgtgatgggtttccccggtcccaaaggtgctgcgggtgag cctggcaaacccggcgagagaggtgctcctggtccccccggcgctgtcggtgctgctggc aaagatggtgaagctggtgcccaaggtcctcctggccctaccggtcctgctggagaaaga ggtgaacaaggtcctgctggtgctcctggcttccagggtctgccgggccctgctggcccc cccggtgaggctggcaagcccggtgagcagggtgtccccggagacgttggtgcccccggt cccgccggtgccaggggtgaaagaggtttccccggtgaacgtggtgtccaaggcccccct ggtccccaaggtcctcgtggtgctaacggtgctcccggtaacgatggtgctaagggtgat gctggtgctcccggtgcccccgggggccaaggcccccccggtctgcagggtatgcccgga gagcgtggtgctgccggcctgccaggcgccaagggtgacagaggcgaccctggtcccaaa ggtgctgatggcgctcctggcaaagacggtctccgaggtctgactggccccatcggccca cccggccctgctggtgctcccggtgacaagggtgaagctggtccccccggtcctgctggt cccactggtgcccgtggtgctcctggtgaccgtggcgagcccggccctcccggtcctgct ggattcgctggccctcccggtgccgacggccagcctggtgctaaaggtgaaactggtgat gctggagccaagggtgatgccggtccccccggccctgctggccccactggtgctcctggc cctgccggtgctgttggtgctcctggtcccaaaggtgctcgcggtagcgctggaccccct ggtgctactggttttcctggtgctgctggaagagttggtccccccggcccctctgggaac atcggcctccccggcccacccggcccaagcgggaaggaaggtggcaaaggaccccgcggt gaaaccggccccgctggccgccctggtgagcctggccccgctggcccccccggacccccc ggcgagaagggctctcccggcgctgacggccccatcggcgctcctggcacccccggaccc caaggtatcgctggccagcgtggtgtcgtcggtctccccggacagagaggcgagagaggc ttccctggcctgcccggtccctctggcgaacctggcaagcaaggtccctccggttcccct ggtgagcgtggtcctcccggccccatgggcccccccggtctcgctggaccccccggtgaa gctggacgtgagggtgctcccggtgctgaaggtgcccccggtcgcgatggtgctgctggt cccaagggtgaccgcggtgagactggccccgccggcccccctggtgctcccggtgctccc ggtgcccccggccccgttggtcctgctggcaagaacggagatcgtggtgagaccggtccc caaggtcccgctggcccccctggtcctgctggtgctcgtggtcctgctggtccacaaggt ccccgtggtgacaaaggtgaaaccggtgaaccgggtgacagaggcatgaagggtcacaga ggcttctccggtctccagggcccacctggtcctcctggctctcctggtgaacaaggtcct tctggtgcttctggtcccgctggtccaagaggtcctcctggctccgctggtgctgccggc aaagatggtctcaacgggctgcctggccccatcggcccccccggcccccgtggtcgcacc ggtgatgtcggcccagtcggtccccccggcccacccggcccccctggtcctcctggcccc cccagcggcggcttcgacttcagcttcctgcctcagccgccccaggagaaggcccacgat ggcgggcgttactaccgagccgacgacgccaacgtgatgcgcgaccgggacctggaggtt gacaccaccctcaagagcctgagccagcagatcgagaacatccgcagccccgagggcacc cgcaaaaaccctgcccgtacctgccgcgacctgaagatgtgccacggcgactggaagagc ggcgaatactggatcgaccccaaccaaggctgcaacctggacgccatcaaggtctactgt aacatggagacgggcgagacgtgcgtctaccccacccaggccaccattgcccagaagaat tggtacctcagcaagaaccccaaggagaagaagcacatctggttcggcgagacgatgagc gacggcttccagttcgagtatggtggtgagggctccaacccagccgacgttgccatccag ctgaccttcctccgcctgatgtccaccgaggccgcccagaacatcacctaccactgcaag aacagcgtcgcctacatggaccaggacaccggcaacctgaagaaggcccttctcctccaa ggcgccaacgagatcgagatcagggctgaaggcaacagccgcttcacctatggcgtcacc gaggacggctgcacgagtcacaccggcacttggggcaagacagtcatcgagtacaagacg acgaagacctctcgcctgcccatcatcgacttggctcccatggacgttggcgctccagac caggaattcggcatcgacatcggccccgtctgcttcttgtaa

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