Nipponia nippon (crested ibis): 104012334
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Entry
104012334 CDS
T05756
Symbol
CASC3
Name
(RefSeq) LOW QUALITY PROTEIN: protein CASC3
KO
K14323
protein CASC3
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03013
Nucleocytoplasmic transport
nni03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104012334 (CASC3)
03015 mRNA surveillance pathway
104012334 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nni03019
]
104012334 (CASC3)
Messenger RNA biogenesis [BR:
nni03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104012334 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
104012334
NCBI-ProteinID:
XP_009462978
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
MVSFLRDPSFVLLGFATRSLDLSPRAGSRTPSGTGRLLAEASRRLLRSQGKRADPRPCLP
VLPVLAACCGSARCPCPPAESEDGIEGDAVLSDYESAEDSEAEEEDYSEEEGAKVELKQD
SNDSCESAAKAEKGDEKPDSKGAVTGERQSGDGQESTEPVENKVGKKVPKHLDDDEDRKN
PAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKTRQELIA
LYGYDIRSAHNPDDIKPRRMRKPRFGSPPQRDPNWSNERPNKPPRHQGGDSTSVPPRTFT
NRSSAGIGRMPPPRNYPRMGGYKETRPSYRASEASVQHLSRNGEQVKQESNYRAKRGEQT
PPRDKSPEMEAAHVHSSPAKEEVALENQATAADAAQPPPDRPIEKKSYSRARRTRIKAGD
AGKLADEVPASEGLTPVPPKPVQAETSPPPAKSSNWESPVESSLDGLEQEMTQMNLTEQN
WTPGQSQFIPPRELRGIPNHMHVGTGPPPQFNRMEEMAVQGGRVKRYSSQRQRPPVPEPT
PPMHISIMEGHYYDPLQFQGPIYTHSENPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPMA
NPGLYPPPVSMPPGQPPPQQLLAPTYFSPPGVMNFGNPGYPYPPGALPPPPPPHLYSNTQ
AQSQVYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEDSKGEKSKERSNT
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggtttcgttcctccgtgaccccagttttgttctcttgggttttgcaacgcgttccctg
gacttgtccccccgtgctggcagccgtacgcccagcggcaccggccggctgctggccgag
gcttcccgccggctgcttcggtcccaggggaagcgggcagaccccagaccctgcctgccc
gttctgcccgtccttgctgcctgctgcggctccgcacgctgcccctgccctcccgcagaa
agcgaggatggcattgaaggagacgctgtactctcagattacgaaagcgccgaagactcg
gaggcagaggaagaggattacagcgaggaagaaggtgccaaagtggaactgaagcaggat
agtaatgattcctgtgagtcagcggcaaaagcagagaaaggggatgagaaacctgactcc
aaaggtgctgtaactggtgagaggcaaagcggggacgggcaggagagcactgaacctgtt
gagaataaagttgggaaaaaagttcccaagcacctggatgatgatgaggatcggaagaac
cccgcttacatcccgcgcaaggggctcttcttcgagcacgacctccgagggcagacgcag
gaggaggaggtcaggccgaagggtcgtcagcggaagctgtggaaggatgagggccgctgg
gagcatgacaaattccgggaggacgagcaggcccccaagaccaggcaggagctgattgcg
ctttatggctatgacatcaggtcggctcacaaccccgatgacatcaagccgaggaggatg
cgcaaaccgaggtttgggagtcctcctcagcgagacccaaactggtccaacgagaggcca
aataagcccccgaggcaccaaggtggagacagcacttcagttcccccgcgaacgttcacc
aacaggagctctgcgggtatagggaggatgcccccgcctaggaactacccgaggatgggg
ggctacaaagagacccgtccaagctaccgagcttcggaagcaagcgtccagcatctgtct
cgtaacggcgagcaagtgaaacaggagagcaactatcgagcaaagcgtggggagcaaacc
ccgccgagggacaagtcacccgagatggaagcggcacatgtccacagcagccctgcgaag
gaggaggttgctttggaaaaccaagccacggctgccgatgctgcacagccaccgccagac
agaccaattgaaaagaagtcttattcccgggcaagaaggaccagaatcaaagctggggat
gcggggaagctggcagatgaggtgcccgcttcggaagggctgactcctgtgcctccaaaa
cctgtgcaagccgagacgtcccccccgccggccaagagcagtaactgggagtcgccggta
gaatccagcttggatggactcgagcaagagatgacccaaatgaatctcactgagcagaac
tggacgccggggcagtctcagttcataccgccccgggagctgaggggtattcctaaccat
atgcacgtgggaactgggccaccgcctcagtttaacaggatggaggaaatggcggtgcag
gggggccgcgtgaaacgctactcgtcgcagcggcagagaccgccagtgccggagccgacc
ccccccatgcacatcagcatcatggaagggcactactacgacccactacaattccaggga
ccaatctacacccacagcgagaacccggccccgctgccgccccaagggatgatcgtacag
ccagaaatgcacctccctcatccaggtttacatccccaccagacgccagcccccatggca
aaccctgggctgtaccctccgccagtctccatgcccccgggccagcccccgccgcagcag
ctgcttgcaccaacttacttctcccctcctggagtcatgaattttgggaatcctggctac
ccctaccccccaggagcgctaccccctccgcctcctccgcatctctattccaacacgcag
gcccagtcccaggtgtacggaggggtcacgtactacaacactgtccagcagcaagtgcag
cccaagccttctccacctcgaaggacgtcgcagcctgtgactatcaagccaccgcctccc
gaggacagcaaaggtgaaaagtcaaaggagaggagcaacacgtag
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