Nipponia nippon (crested ibis): 104012707
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Entry
104012707 CDS
T05756
Symbol
SOX5
Name
(RefSeq) transcription factor SOX-5 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nni03000
]
104012707 (SOX5)
Transcription factors [BR:
nni03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104012707 (SOX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
104012707
NCBI-ProteinID:
XP_009463375
LinkDB
All DBs
Position
Unknown
AA seq
756 aa
AA seq
DB search
MMSSKRPASPYGEADGEVAMVTSRQKVGEEESDGLPAFHLPLHVSFPNKPHSEEFQPVSL
LTQENCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPLKAEEGGRQSGESLSSTALGTP
ERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTP
ESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQ
QQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSD
PYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGGKIPGIPQGNLGAAVSPT
SIHTDKSTNSPPPKSKDEVAQPLNLSAKPKTSDGKSPTSPTSPHMPTLRINSGASALKSS
VPATLASPSARANTIDILSSITSSGYLNDHDAVTKAIQEARQMKEQLRREQQVLDGKVAV
VNSLGLNNCRTEKDKTTLETLTQQLAVKQSEDGKFSHAMMDFNMSGDSDGSAGVSESRIY
RESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQ
PYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVG
QQAQIPIATAGVVYPGAGMPSPHLPSEHSSVSSSPEPGMPVIQSTYGIKGEEPHIKEEMQ
TDDVNGEIYDEYDEEEDDPDADYGSDSENHIAGQAN
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttccaagcgaccagcctctccgtatggggaagcagatggagaggtagccatg
gtgacaagcagacagaaagtgggagaagaggagagtgacgggctcccagcctttcacctt
cccttgcatgtgagttttcccaacaagcctcactctgaggaatttcagccagtttctctg
ctgacgcaagagaactgtggccataggactcccacttctcagcacaacacaatggaagtt
gatggcaataaagtgatgtcttcatttgccccgcacaactcatctacctcacccttgaag
gcagaagaaggtgggcgtcagagtggagaatcattgtccagcacagccctgggaacccct
gaaaggcgcaaagggagcctagcggatgttgtagacacccttaagcaacgaaaaatggaa
gagctcatcaaaaatgagccagaagaaactcccagtattgaaaagctactatcaaaggac
tggaaagacaagcttcttgccatgggatcagggaactttggagaaataaaagggactcca
gaaagcctcgctgagaaagaaaggcagctcatgggtatgatcaatcagctgaccagtttg
cgagaacagctgctagcagctcatgatgaacagaagaaactggctgcatcacagatcgag
aaacaacgccaacaaatggagctggctaagcagcaacaagaacagattgcaagacaacag
cagcagctcctgcagcagcaacacaaaattaaccttcttcagcaacagatccaggtccag
ggtcagctgcctccattaatgattcccgtattccctccagaccaacgaaccctagcagca
gctgcacagcaaggattccttcttcctcctggtttcagctacaaagcgggatgcagtgac
ccttaccccgttcagctgatcccaactaccatggcagctgctgccgcagcaacaccaggc
ttaggcccactccaactgcagcagttgtatgctgcccaacttgctgcgatgcaagtgtct
ccgggaggcaagatacctggcataccccagggtaaccttggtgctgctgtatcccctacc
agcatccacacagacaagagcacaaacagccctccacccaaaagcaaggatgaagtggcc
cagcctctgaacctttcagccaaacccaagacatcagatggcaagtctcccacatcaccc
acctctcctcatatgccaactctgagaataaatagtggggccagtgcactaaaatcctcc
gtgccagcaacattagctagtccttcagccagagctaacacaatagatatcctttcttct
atcacgtcgtcaggttatttaaatgaccacgatgctgttaccaaggcaatccaggaggcc
cgacagatgaaggaacaacttcggagggaacaacaggtgctggatgggaaggtggccgtt
gtgaatagcctgggtctcaataactgcaggacagaaaaggacaaaacaacactggagacc
ctgactcagcaactggcagtaaaacagagtgaagacgggaagtttagccacgcaatgatg
gatttcaacatgagtggagattctgacggaagtgcaggagtttcagagtctagaatttat
cgggaatccagagggcgtggtagcaatgagccccatatcaagcgcccaatgaatgcattc
atggtgtgggctaaagatgaacggaggaagatccttcaagccttccctgacatgcacaac
tccaatatcagcaagatactaggatctcgctggaaagctatgacgaacctagagaagcag
ccatactatgaggagcaggcccgactcagcaaacagcacctggagaaatacccagactac
aaatacaagccaaggccgaagcgtacctgccttgtagatggcaaaaaattacgcattggc
gagtacaaggctatcatgcgcaacagacgccaggagatgaggcagtattttaatgttggg
caacaagcacagattcccattgccaccgcgggcgtagtttacccaggagccggaatgcct
tccccacatctgccctctgagcactcgagcgtgtccagcagcccggagcccgggatgccc
gtcatccagagcacttacggcatcaaaggcgaggagcctcatatcaaggaagagatgcag
accgatgacgtcaatggagaaatctacgatgaatatgatgaggaagaggatgaccccgat
gcggactatggcagtgacagtgaaaatcacattgcgggtcaagccaactga
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integrated database retrieval system
