Nipponia nippon (crested ibis): 104012756
Help
Entry
104012756 CDS
T05756
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nni03021
]
104012756 (SUPT6H)
03036 Chromosome and associated proteins [BR:
nni03036
]
104012756 (SUPT6H)
Transcription machinery [BR:
nni03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
104012756 (SUPT6H)
Chromosome and associated proteins [BR:
nni03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
104012756 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
104012756
NCBI-ProteinID:
XP_009463429
LinkDB
All DBs
Position
Unknown
AA seq
1727 aa
AA seq
DB search
MSDFVESEAEESEEEYNQDGEVVPRVTKKFVEEDEDDEEEEEENLDDQDEQGNLKGFIND
DDDEEEEEEEEASDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRGQKFRRV
RKMSDDEDDEEEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVEAPVAPPEEEEEEEEDESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEEEY
EYEDEEAEGETRVRPKKTAKKRVSRRSIFEMYEPSELESSHLTDQDNEIRMTDMPERFQL
RSIPVKSAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQASSSFSRKGPSTIQKIK
EALNFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
AAKAARKKQKRIREDGEEEEGEGEDAEDDEQKGPELKQASRRDMYTICQTAGLDGLAKKF
GLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCGQFPSPEAVLEGARYMVALQIARE
PLVRQVLRQTFQERAKINISPTKKGKKDIDEAHYAYSFKYLKNKPVKELRDDQFLKMSLA
EEEALLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQ
FLYVQMAKELKNKLLVEAKEYVLKACSRKLYNWLKVASYRPDQQVEEDDDFMDENQGKGI
RVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREKKAQDIETLKKF
LLNKKPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKS
ENEFRDYPPLLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEELLNALY
CEFINRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVT
MCHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDES
AEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRT
PYRSPNTEEVFNMLTKETPETFYIGKMIICNVTGIAHRRPQGESYDQAIRNDETGLWQCP
FCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVAGFIPTKFLSDKVVKRPEERVKV
GMTVHCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDSEAADHKQEEDLKRK
QQRTTYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQ
HVDVREEGKENAFSLGSTLWINTEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCNGGD
KKKLEELLIKTKKEKPTFIPYFISACKDLPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQ
VFPTVNALPRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNM
TSQMFSAIAAVTGQGQNPNATPAQWASSQFGYGGSGGGSSAYHVFTTPAQQPVATPLMTP
SYSYTTPSQPITTPQYQLQANTTPQSTQSQTQSQPSSSSRQRQQPKTNSHAAIDWGKMAE
QWLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5184 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactttgtagaaagtgaagcggaggagtcggaggaggaatacaaccaggatggg
gaggttgtgcctagagtaaccaagaagtttgtagaggaagatgaggatgatgaggaagag
gaggaggagaatctcgatgatcaagatgagcaggggaacctgaaaggattcattaacgat
gatgacgatgaggaagaggaagaagaggaagaagccagtgactctggagactctgaggac
gatgttggccacaaaaagagaaagcgcacttttgatgaccgcctggaggatgatgatttt
gacctcattgaagagaacttgggcgttaaagtcaaaagagggcaaaaattcaggcgtgtg
cgaaaaatgtccgatgatgaggatgacgaagaggaagactatggaaaggaagaacatgag
aaggaagccattgctgaagaaatctttcaggatggtgaaggcgaggagggaggggaagcc
gttgaagctcctgttgctccaccagaagaggaagaggaggaggaggaagatgaatctgac
atcgatgacttcattgtggatgatgatggacaacctctgaagaagccaaaatggcgaaag
aagctccctggatacacagatgctgctttgcaggaagcccaggagatctttggtgtagac
ttcgactatgatgagtttgagaagtacaacgagtacgatgaggagatggaggaggaatat
gagtatgaggatgaagaagccgaaggggagacccgtgtacgacccaaaaagactgccaag
aagcgtgtcagtcggcgtagcatctttgagatgtacgagcccagtgagctggagagcagt
cacctgacggaccaggacaacgagatccgcatgacagacatgcccgagcggttccagttg
cgatccatcccggtgaagagtgctgaagatgatgagctggaggaagaagctgactggatt
tacaggaacgcatttgcgacacccactatctccttgcaggaaagttgtgactacctcgac
cgtggacaagccagcagcagcttcagccgcaaggggcccagcaccatccagaagattaaa
gaagccctgaatttcatgagaaatcaacattttgaggtcccattcatcgccttctacaga
aaggagtatgtggagccagagctgcacatcaatgacctgtggagggtctggcagtgggat
gagaagtggacccagctgaagatccgcaagcagaacctgacacgtctgtttgagaagatg
caggcataccagtatgaacaaatctctgctgacccagacaagcccttggctgatggaata
agggccctggatactactgacatggagaggctgaaggacgtgcaatccatggacgagctg
aaggacgtgtataatcacttcctgctgtactatgggcgagacatccccaagatgcagaat
gctgccaaggctgctcgaaagaagcaaaagcgtatccgagaggatggtgaagaggaggaa
ggtgaaggggaggatgcagaagatgatgagcagaaagggccagagctgaagcaggcttcc
cgtcgggatatgtacaccatctgtcaaacagctgggctggatggcctggctaagaagttt
ggtctgacacctgaacagtttggagagaatctccgagacagttaccagcgtcatgagaca
gagcagttccccgcagagcccctggagctggccaaggattatgtgtgtggtcaattccca
agccctgaagcagtgctggaaggagcccggtacatggtggctttgcagatagccagggag
cctttggtcagacaggtcctgagacagactttccaagaaagagccaaaatcaacatttca
ccaaccaaaaaggggaagaaggatattgatgaagcccactatgcttattcctttaaatac
ttgaagaacaagcctgtgaaggagctgcgagatgaccagttcctgaaaatgagcctggca
gaggaggaggcactgctgaccatagatatcagcattgacatgaaaggagtggagggttat
ggtagcgaccagacgtactttgaggagatcaaacagttctattatcgggatgagttcagc
caccaggtgcaggagtggaatcggcagcgtacgatggccatcgagcggtccctcaaccag
ttcctctacgtgcagatggctaaagagttgaagaacaagctgttggtggaggccaaagag
tatgtcctcaaggcttgcagccggaagctgtacaactggctaaaagtagcttcataccgt
cctgatcagcaagtggaggaagatgatgatttcatggatgaaaaccaagggaaggggatt
cgggtgctaggcattgcattttcctcagccagggaccaccccgtgttttgtgcccttgtt
aatggagagggtgaggttacagacttcctccgattgccacatttcacaaagagaaggaat
gcctggcgtgaggaagagagggaaaagaaggcccaggatattgaaacgttgaaaaaattc
ctcctgaacaagaagcctcatgtggtgacaattgcaggcgagaacagggatgctcagatg
ctgatggaggatgtaaaaagaattgttcatgagctggatcaagggcagcagctgtcctct
atcggggtggagctggtggacaacgaactggccatcctctacatgaacagcaagaagtct
gagaacgagttccgggattacccacctctgctgcgtcaagccgtctcccttgctcgccgc
attcaggaccccctcatagagtttgcccaggtctgcagctccgatgaggatattctctgc
ctaaaactccaccctctgcaggagcacgtggtgaaggaggaactgctgaatgccctctac
tgcgaattcataaaccgtgtgaatgaggtgggagtggatgtcaatcgggcgattgctcac
cctcacagccaggctttgctgcagtatgtgtgtggcctgggaccacgcaaaggcactcat
ctgctaaagatcttaaaacaaaacaacacgcgtctggagaacaggacccagctggttacg
atgtgtcacatgggacccaaggtgtttatcaactgtgctggcttcatcaaaattgacaca
gcatcgctgggtgatagtactgattcctacatcgaagtcctagatgggtctagggtccat
cctgaaacttacgaatgggcaagaaaaatggcagtggatgccttagaatacgatgagtcg
gcagaggacgctaatcccgcaggggctttagaggagatcttggaaaaccccgagcgtctg
aaagacctggatcttgatgcctttgctgaagaactggaaagacagggctacggtgacaag
catatcactttatatgacattcgagctgaactaagctgcaggtacaaggacctgagaacc
ccataccgttctccaaacacagaagaggtcttcaatatgctgaccaaagaaactccggag
actttttatataggtaaaatgatcatctgcaacgtgactgggatagcccacaggcggccg
caaggagaaagctatgaccaggcaatacggaacgatgaaactggcctttggcagtgtcct
ttctgtcagcaggataacttcccagagctcagcgaggtttggaaccactttgacagcggt
tcctgcccaggtcaggccattggagtgaagacacgtctggataatggtgtcgctggcttc
atcccaacaaaatttcttagtgataaggtggtcaagcggccagaagaaagggtgaaggta
ggaatgaccgttcactgcaggattatgaagatcgacattgaaaagttcagtgcagacctg
acctgcaggacctcagacttgatggataagaacaatgagtggaaactgcctaaagacacc
tactacgactttgactctgaggcagcagatcacaaacaggaagaagacctgaaaagaaag
caacagcggacaacatacatcaagagagtaattgctcacccatcattccacaacattagc
ttcaagcaagccgagaagatgatggagaccatggaccaaggggatgtgattattcggcca
agtagcaaaggggagaaccacctgactgtcacctggaaggtgaacgatgggatttaccag
cacgtggatgtccgagaagagggcaaggagaatgccttcagcctgggctccacgctttgg
attaacacagaggagtttgaagacctggatgaaattgttgctcgctacgtccagccaatg
gcttcttttgccagagacctgttgaatcacaaatactatcaggactgcaacggcggagat
aagaagaagctggaagagctgctgataaagaccaagaaagagaagccaacatttattccc
tactttatcagtgcctgtaaagatctacctggcaaattcctcttgggatatcagcctcga
ggcaaaccaaggatagagtatgtgacagtgacaccagaaggattccgctaccggggccag
gtcttccctaccgtgaatgctcttccgcgatggtttaaggatcattatcaggaccctgtt
ccaggtattacccccagcagtagcagtcggaccagaactccagcctccattaatgctact
ccagctaacattaacctggcagacctgacccgtgcagtgaacgctctaccgcagaacatg
acctcccagatgttcagtgccatcgctgccgtgacaggccagggacagaacccaaatgcc
acccctgcgcagtgggcatccagtcagtttggctacggaggcagtggaggtggcagcagc
gcgtaccatgtcttcacgactccagcacagcaaccggtggccacccctctgatgaccccc
agttactcctacactacccccagccagccgattacaacgccccagtaccagctccaggcc
aacacaacaccccagtccacccagtcccagacacagtcgcagccatcgtccagctccagg
cagaggcagcagccaaagacgaacagtcacgctgcaatcgactgggggaagatggccgag
cagtggctccaggagaaggaggctgaacggaggaaacagaagcagaggttgactcctcgc
ccatctcccagccccatgatcgagagcacccccatgtccatcgctggggacgccacgccg
ctgctggatgagatggatcgatag
DBGET
integrated database retrieval system
