Nipponia nippon (crested ibis): 104012859
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Entry
104012859 CDS
T05756
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked
KO
K16498
protocadherin delta 1
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104012859 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nni01009
]
104012859 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nni04515
]
104012859 (PCDH11X)
Protein phosphatases and associated proteins [BR:
nni01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104012859 (PCDH11X)
Cell adhesion molecules [BR:
nni04515
]
Cadherins
Protocadherins
104012859 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
K319L-like_PKD
Fibulin_C
Cadherin_4
TMEM154
Big_9
VirB8
DUF6249
Motif
Other DBs
NCBI-GeneID:
104012859
NCBI-ProteinID:
XP_009463544
LinkDB
All DBs
Position
Unknown
AA seq
1010 aa
AA seq
DB search
MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSP
LQFKLVYKTGDVPLVRVEENTGEIFTTANRIDREKLCSGIFSENRCFYEVEVAVLPDEVF
RLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLK
GQNVFGLDIIETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDGGSPPRSSTAILQVTVT
DVNDNRPVFKENDIEVSVPENAPVGTSVSQLHATDADLGSNAQIHFYFSNQISSLAKRLF
AIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVNVTDINDNVPSIDTRYI
INPVNGTVLLSEKAPLNTKIALITVMDKDADLNGKVTCFTDHDVPFRLKPVFDNQFLLET
ATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNA
PGTQLTKISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTV
LAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDADSG
ENAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVKAVDGGRLQRSSTAKVT
INVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDNDTGMNAELRYSIIGGNS
RGLFTIDQLTGNITLKEKVITSDHGLHRLVIKVNDLGQPESLYTIALVHLFVNETVTNSS
YVQELVRRNMETPVGQNVGDGEITPQTNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTP
RHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVTIEESKPDDPGHEHING
TLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVPPKKHHV
IQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGPIHTRQL
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggacttgctgtctggaacctacctcttggcagtcttattagcctgtattgtattccaa
tctggcgcacaggagaagaattataccgtgcgggaagaactgcctgaaaatgtcctcatt
ggcaatttgctcaaggatcttaacctaacgctggacccagatgttcccctttcctcaccg
ctacagttcaagcttgtgtataagactggggatgtaccattagtacgggtggaggagaac
actggtgagatattcacaactgcaaaccgcatagaccgagagaagctgtgctctggcatc
tttagtgagaatcgctgcttttatgaggtggaggttgctgttttgcctgatgaagttttc
agactggtcaagatcagattcctaatagaggatataaatgacaatgcccccctcttcccc
tcaacagttattaacatctctatccctgaaaacacagcaattaattctcgctattctgtc
ccatctgccatcgatccggacattggtgtgaatggtattcaacattatgaactccttaag
ggtcaaaatgtatttggtcttgatataattgagacacctgagggagataagtggcctcaa
ctgattgtccagcagatcctggatagggagcagaaggatacctatgtgatgaaaattaaa
gttgaagacggtggaagccctccaagatctagcactgccatcctgcaagtcacagtgact
gatgtgaatgataatcgcccagtcttcaaagagaatgacattgaagttagtgttccagaa
aatgctccagtgggcacctctgtttctcagctccatgccactgatgcagacctgggctca
aatgcacaaatccacttctatttcagcaatcagatctccagtttggccaaaaggctgttt
gccattgataacaccactggcctcatcactatacgagaaccactagaccgggaggaatct
cctgtacacaaattaactgttttggcaagtgatggcagttcaactccatcaagagcaaca
gtgactgttaatgttacggatattaatgacaatgtcccatcaatagacacaagatacatc
atcaatccagtgaacgggacagtgcttttgtctgagaaggctccccttaatacaaaaatt
gcattgataacagtgatggacaaggatgctgatctgaatggaaaagttacttgttttaca
gatcatgatgtcccttttaggctaaaaccagtgtttgataatcagtttcttctggagaca
gccacgtttctagattatgaagccacacgggaatatgccattaaaatagtggcttcagat
tcagggaaacctccgttaaaccagtctgcaatgctcctgatcaaaattaaagatgaaaat
gacaatgccccagtttttacacagcctatcataggtctttccatccctgaaaacaatgct
cctggtactcagctaaccaagataagtgctacggatgctgacagtgggcgcaatgcggag
atcagctatatcctgggttctgatgcaccccctattttcaaccttgaccgccgtacaggc
attctgacagcagtgagaaagctggacagagaaaagcaagacaggtactccttcactgtg
ctggctaaggataacgggatgccacccttgcagaccaatgctactgtgacagtgtctgtc
ctggaccagaatgataacagccctgctttcacacataatgagtataatttctatgtgcca
gaaaacttacccatgtatggcacagtggggcttatcacagttacagatgctgactcggga
gagaatgctgcggtcactctctctatattaaatggtagagataatttcattatagatcca
cttactggtgtaataagacctaatattacctttgatagagaacagcagggctcatacact
ttccaggtaaaagctgtggatggaggaagactgcagcgttcctcaactgccaaagtgacc
atcaatgttgttgatgtaaatgacaacaggcccgtttttgttattccttcatctaattat
tcgtatgagttggttccaacatcggccagtccagggtctgtagtaactaaagtctttgca
gttgataatgacacaggaatgaatgcggagctccgctatagcatcataggtgggaactca
aggggcttgtttacaattgaccaattaacaggcaatattactttgaaagagaaggtaatt
acatcagatcacggcttgcacagactggtgataaaagtcaatgacctaggacagccagag
tcgctttatactatagctctcgtgcatttgtttgtgaatgagacagtcaccaatagttcc
tacgtacaagagctagtgcgcaggaatatggaaactccggttggccagaatgttggggat
ggtgagataaccccgcaaaccaatgattatgtcaagatcatcattgccattattgcaggc
actatgacagttattctggtaatttttgttactgctttggtacggtgccgccagacacct
aggcacaaggttgtccaaaaaaacaagcagagtggtgaatgggtttccccaaaccaagag
aataggcagatcaagaaaaagaagaagaagaagaagcgctctccaaaaagtctcctcctc
aactttgtgactattgaagaatctaagcctgatgatcctggccacgagcacataaatggc
actttagacattcccgtagagctagaagaacagactatgggaaaatataactgggccaca
acaccaaccacatttaagcctgatagcccagatttagcaaagcactacaagtctgcttct
ccgcagcctacctttcaaattaaacctgagactcctgtaccccccaagaagcaccatgtc
attcaggaactgcctctagataacacctttgtggtgggctgtgactcgctttccaagtgc
tcatcaagcagctcggacccttacagtgtttctgaatgcagctgtcaaggaggcttcaag
accccaggccccatacacaccagacagctctga
DBGET
integrated database retrieval system
