Nipponia nippon (crested ibis): 104012977
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Entry
104012977 CDS
T05756
Symbol
MED12
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 12
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nni03021
]
104012977 (MED12)
Transcription machinery [BR:
nni03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
104012977 (MED12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12-PQL
Med12
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
104012977
NCBI-ProteinID:
XP_009463683
LinkDB
All DBs
Position
Unknown
AA seq
2146 aa
AA seq
DB search
MPQGSPPQGCPQEQGQCGDPDPRPDYVVGRELRTFGEERPRRALLIVLPPQDELTALNVK
QGFNNQPAVSGDEHGSAKNVNFNPAKISSNFSSIIAEKLRCNTLPDTGRRKPQVNQKDNF
WLVTARSQSAINNWFTDLAGTKPLTHLAKKVPIFSKKEEVFGYLAKYTVPVMRAAWLIKM
TCAYYAAITETKVKKRHVIDPFIEWTQIITKYLSEQLQKIAEFYRQLPGQGCGSPSGPMP
QEVEQALKQWDYNEKLAMFMFQDGMLDRHEFLTWVLECFEKIRSGEDEFLKMLLPLLLRY
SGEFVQSAYLSRRLAYFCTRRLAMQLDGAGGHPPHILSAQTGNPAAGNPPPSPFSDLLLC
PQHRPVVYGLSCILQSIILCCPSALVWHYSLTDSRIKTGSPLDHLPIAPSNLPMPGGNSA
FTQQVRAKLREIEQQIKERGQAVEVRWSFDKCQETTAGFTIGRVLHTLEVLDSHSFERSD
FSNSLDSLYNRIFGLGPTKDSHEISPDDDAVVALLCEWAVSYKRSGRHRAMVVAKLLEKR
QAEIEAERCGDSEVVDEKGSISSGSLSAASAPVFQDVLMQFLDTQAPMLTDPGKENEKVE
FFNLVLLFCELIRHDVFSHNIYMCTLISRGDLAMDSHGPRPPSPFDDAAEEHDRKETEGN
SGIKLEDTGLSEPMDIDHNSSMLFDDMEKTDFSMFSPPMHCESKASPSPEKPDPEKEAKP
LLKDKSVEGMLASLYDQPRHIQYATHFPIPQEESCSHECNQRLVVLFGVGKQRDDARHTI
KKITKDILKVLNRKSTAETGGEEGQKRKKSKPEAFPTAEDIFAKFQHLSHFDQHQVTSQV
SRNVLEQITSFALGMSYHLPLVQHVQFIFDLMEYSLNISGLIDFAIQLLNELSVVEAELL
LKSSDLVGSYTTSLCLCIVAVLRHYHSCLILNQDQMAQVFEGLCGVVKHGIXSDGSSAER
CILAYLYDLYTSCSHLKSKFGELFSDFCSKVKNTIYCNVEPSDSNMLWEPEFMIDTIENP
SAHNFTYTNLGKSLNENPANRYSFVCNALMHVCVGHHDPDRVNDIAILCAELTGYCKSLS
AEWLGVLKALCCSSNNGTCGFNDLLCNVDVSDLSFHDSLATFVAILIARQCLLLEDLIRC
AAIPSLLNAACSEQDSEPGARLTCRILLHLFKTPQLNPCQQDGNKPTVGILPASQNRIVD
GAVFAVLKAVFVLGDAELKGSGFSHPGGVDDLMDDELGTRKAGGRVVTVETASLDIYAKY
VLRSICQQEWVGERCLKSLCEDSNDLQDPVLSSTQAQRLMQLICYPHRLLDNEEGENPQR
QRIKRILQNLDQWTMRQSSLELQLMIKQTANNEMNSLLENIAKATIEVFQQSAETSSASS
AGNGVNNISSSASATPASNKSKPILSSLERSGVWLVAPLIAKLPTSVQGHVLKAAGEELE
KGQHLGSSSRKERDRQKQKSMSLLSQQPFLSLVLTCLKGQDEQREGLLTSLYSQVQQIVT
NWREDQYQDDCKAKQLMHEALKLRLNLVGGMFDTVQRSTQQTTEWAVLLLDIISSGTVDM
QSNNELFTTVLDMLSVLINGTLAADMSSISQGSMEENKRAYMNLVKKLRKELGDRQSDSL
EKVRQLLPLPKQTRDVITCEPQGSLIDTKGNKIAGFDSIFKKEGLQVSTKQKISPWDLFE
GLKHSAPLSWGWFGTVRVDRKVSRFEEQQRLLLYHTHLKPKPRSYYLEPLPLPPEEEEPP
TPVALEPEKKAAEPAKADKTSSNPATSTEERKKKQSKTKKRNQSASKTEDFVLGPSRGVS
YGVGMPTDLLHHQSGSTMSRLAYGQSPVGLYAQNQPLPAGGPRLDTSYRPVRVPLGKLVQ
SRPPYSGVLPPGMGSMMGIDPSYKPAVYRQQPPVSQGQILRQQLQAKLQGQGIMGQQPVR
QMAPTPSYGALQPSQGYTSYVSHIGLQQHPSQSGTMVPPTYSGQPYQNSHPSSNPALVDP
VRQMQQRPSGYVHQQAPGYGHTLGNTQRFPHQSIQQAPMMSGMNHLGPQGVPSGIRPSQI
LSDQQQQQYLRQQQQQQQQMLRQQQQQQQQQQQQQQQQPQPPQPQPQQQPQVSTVPQPQA
QGQPQFQRQALQQTPQQQQTAALVRQLQQQLSNTQTQQNNNPFGRY
NT seq
6441 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagggctcacccccacaaggctgcccccaggagcagggccagtgtggtgatccc
gacccacggcccgactacgtggtggggagagagctgcggacctttggcgaggagaggcct
cgccgggccctgctgatcgtccttcccccgcaggatgagctgaccgctctgaacgtcaag
caaggcttcaataaccagccagccgtctctggggacgagcacggcagtgccaaaaatgtc
aatttcaacccggcgaagatcagttcaaattttagcagtattattgcagaaaagctgcgg
tgcaatacgctgcctgacacgggaagacggaaaccgcaggtgaatcagaaggataacttt
tggctggtgacagcacgttctcagagtgccataaataactggtttacagatctggctgga
actaagcccctcactcatctcgctaagaaggtgcccatcttcagcaagaaggaagaggtc
tttggttatttggcgaaatacactgttccagtaatgagagcagcctggctcatcaaaatg
acttgtgcctattatgctgccatcacagaaaccaaggtgaaaaagcgtcatgtcattgat
cccttcattgaatggacgcagatcatcaccaagtacctgtcagagcagctgcagaaaatc
gcggagttctatagacaactcccagggcaaggctgtggttcaccgtctgggccaatgccc
caagaggtggaacaagctttgaagcagtgggactacaatgagaaactagctatgttcatg
ttccaggatggcatgctggaccggcatgaattcctgacgtgggtcctcgagtgctttgag
aagatacggtcaggagaagatgaatttctgaaaatgctcctacccctgctgctgcggtac
tctggagagtttgtgcagtctgcatacctgtccagacgtctggcctacttctgcacccgc
aggcttgctatgcaactggatggtgctggcgggcacccaccccacatcctgtctgcccag
acagggaacccagctgcagggaatcctcctcccagccctttcagtgacttactgctgtgc
ccccagcaccggccagtggtatatgggctcagctgcatcctccagagtataattttgtgt
tgcccaagtgcccttgtgtggcattactcattgactgatagcaggataaagactggctct
ccgttggaccacctgcctatagccccatccaacttgcccatgccaggagggaattcagcc
tttacacagcaggttcgggcaaagctgcgtgaaattgagcagcagataaaggaacgtggc
caggctgtggaggttcgctggtcatttgacaagtgccaggaaaccacagcaggtttcact
attggccgtgtcttgcacactttagaagttctggacagtcacagctttgaaagatctgac
ttcagcaactctttggattccttgtataacaggatatttgggctgggtccaaccaaagac
agtcatgagatctccccagacgatgacgcagtggtggccttgctgtgcgagtgggctgtc
agctataagcgctctggacgccacagggctatggttgtggccaaactcctggagaagcgt
caagcagagatagaggctgagagatgtggggactctgaagtcgtggatgagaagggctcc
atctcctcaggctcgctctcagcagccagcgctcctgtctttcaggatgtccttatgcag
ttccttgacactcaagctcctatgctaactgatcctgggaaggagaatgagaaggtggag
ttctttaacctggtgctgctattctgtgagctaatccgacatgatgtcttctctcacaac
atctacatgtgtacactgatctcccgcggtgatctcgccatggattctcatgggcctcgc
ccgccctcaccctttgacgacgctgctgaggagcacgacaggaaggagacggaaggaaac
agtggcatcaagctagaggacacaggtctttctgagcccatggacatcgaccacaactcc
agcatgctctttgatgacatggagaagacagacttttcgatgttttctcctccaatgcat
tgtgaatctaaagccagcccttcccctgagaaaccagatcctgaaaaggaagcaaagcct
ctgctgaaggataagtctgtggaaggaatgctagcctccctgtatgaccagcctcggcac
atccagtatgcaacacactttcctattcctcaggaggagtcatgcagtcacgagtgtaac
caacggttggtagttctttttggggttggaaaacaacgggatgatgctcggcatacgatc
aagaaaataaccaaagacattctaaaagtcttaaacagaaagagcactgcagagacaggt
ggagaggaaggccagaagaggaaaaagagcaagccagaagcattcccaacagctgaagat
atctttgcaaagtttcagcacctttctcactttgatcagcaccaagtcacatctcaggta
tctcgcaatgtcttggaacagatcaccagctttgccttgggaatgtcataccacctgcct
ctggtacagcacgtgcagttcatatttgatttgatggagtattcactcaatatcagtggt
cttatcgactttgccatccagttgctgaatgaactgagcgtggtggaggcagaactgctg
ttgaaatcctccgaccttgttggcagctacaccaccagcttgtgcctgtgcatcgtggct
gtgctgcggcactaccactcctgccttatattgaatcaggaccagatggctcaggtcttc
gaaggtctgtgtggggtggtgaaacatggcatangctcagatggctcctcagcagagcgc
tgtatcctggcctatctctacgacctgtatacctcctgcagtcacctcaaaagtaaattt
ggggagctctttagtgacttctgctccaaggtgaagaacacaatctactgcaatgttgag
ccatctgactccaacatgctatgggaaccagagttcatgattgacactattgaaaatcca
tctgcacataactttacatacaccaacctgggcaagagcctcaacgaaaacccagccaac
cgctacagtttcgtctgtaatgcacttatgcatgtgtgtgtgggacaccacgatccagac
agggtgaacgacattgctatcctgtgtgctgagctaactggctactgcaagtctctaagc
gccgagtggctgggtgtgctcaaagctttgtgctgttcctccaataatgggacctgtggc
ttcaatgatctcctctgcaatgttgatgtcagtgacttatctttccatgattccttggcc
acctttgttgccattctcattgcccggcagtgcttgctgctggaggacctgattcgctgt
gctgctatcccctcactcctcaatgctgcctgcagtgagcaggactcagaaccaggagca
cgtctgacctgccggattttactccatctgtttaagactccgcagctgaacccatgccag
caagatggcaacaaacccacggtgggaatcctgccagcttcccagaatcgtattgtggat
ggagcagtctttgcagtgctgaaggctgtctttgttctgggagatgcagaactgaaaggc
tctggcttttcccaccctggtggtgtcgatgatctcatggatgatgagctgggcaccagg
aaggctggtggtcgggtagtaactgtagaaacagctagcttggatatttatgccaagtat
gtactaaggagtatatgtcaacaggagtgggtaggtgagcgatgtctgaagtccctctgt
gaagacagcaatgacttgcaggatcctgtcctgagcagcacacaggcccagaggctgatg
cagctgatctgttatccacaccggctgctggacaacgaggaaggagaaaatcctcagcga
cagaggattaaacgcatcttacagaatctggaccagtggaccatgaggcagtcctcgctg
gagctgcaactcatgattaagcagacggcaaacaatgagatgaactccttattagaaaat
atagccaaggccaccattgaggtattccagcagtcagcagagaccagctctgctagctct
gctggcaatggagtcaacaatatcagtagctcagcaagtgctacgcctgccagcaacaaa
tccaaacccatcctcagctccctggagagatcaggagtgtggctggtggcccctctgatt
gccaagcttccaacatcagtgcagggccatgtgctgaaagctgctggagaagaactggag
aaaggacaacatctggggtcatcgtcccgcaaagagcgggaccgccagaagcagaagagc
atgtctcttctgagccagcagccatttctgtcactggtgctaacatgcttaaaaggacag
gatgagcagcgggaaggcctcctcacctctctgtacagtcaagtccagcagattgttacg
aattggcgggaagatcagtaccaagatgactgcaaagccaagcagctgatgcatgaggcc
ctgaaactacggctgaatttggtggggggaatgtttgacacagttcaacgcagtacacag
cagacaactgaatgggctgtgcttctcctggacatcatcagcagtggcaccgtggacatg
cagtcaaacaacgagctcttcaccaccgtgttggacatgctgagtgttctcatcaacggc
accctggctgctgatatgtccagcatttctcagggcagcatggaggagaacaagcgggca
tacatgaatcttgtcaagaagctcaggaaggagctgggggaccggcaatccgacagcctg
gagaaggtgcgacagctactgccacttcccaagcagacccgagatgtcatcacctgtgaa
cctcagggatccctgattgacaccaaaggcaataaaatagctggatttgactccatcttc
aagaaggagggtttgcaagtctctacaaagcagaagatttccccttgggatctgtttgag
ggcttaaagcactcagcccctctctcctggggatggtttgggacagtccgggtggatcgc
aaggtgtctagatttgaggagcagcagaggcttcttctgtaccacacacacttgaaaccc
aagccccgcagttactacctggagccgttgccgctgccccctgaagaggaagagcctcct
acacctgtggctttagagccagagaagaaagctgcagaaccagccaaggctgataaaaca
agctccaatcctgccacctctactgaagaacgcaagaagaaacagagcaaaaccaagaaa
cgcaaccaatctgccagcaaaactgaggattttgtgttgggccctagccgaggggtttca
tatggagttggtatgcctacagatctcttgcatcaccagtcaggaagcactatgtcgagg
ctggcatatgggcaatcaccagtgggtctctatgcccagaatcagccgcttccagcaggt
ggccctcgcctggatacatcctacagacctgtacgcgtgccactggggaaacttgttcag
agtcgtcctccctatagtggtgtgctgcctccagggatggggagcatgatgggcattgac
ccctcctacaagccagcagtgtacagacagcagcctccagtgtcccagggacagatactg
aggcagcagcttcaagcaaagttgcagggtcaaggcataatgggacagcagcccgtgcgc
cagatggctccaaccccatcctatggagcactgcagccctcccagggttacacatcttac
gtctcccacataggccttcagcagcacccctcccagtcaggcacgatggtacctcctacc
tattctggccagccctatcagaattctcaccccagctctaatcctgccctggtggatcct
gttagacagatgcagcagagaccaagtggctacgtacaccagcaggcccctggctatggg
cacaccttgggcaacacacagaggtttcctcaccagtcaatacagcaggcccccatgatg
agtgggatgaaccatttgggtccacaaggagtcccctcaggaattcgacccagccagata
ctgtctgaccagcagcagcagcagtacctgaggcagcagcagcaacagcagcagcagatg
ctgaggcagcaacagcagcagcagcagcaacaacagcaacaacaacagcagcagccacag
ccgccgcagccacagccgcagcagcaaccccaggtctccacagtgcctcagccacaggcg
cagggccagccgcagttccagcgccaggcccttcagcagacaccgcagcagcagcaaaca
gctgctctggttcgacagcttcaacagcagctttccaatacacagacacagcagaacaac
aacccgtttggacgctactga
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integrated database retrieval system
