Nipponia nippon (crested ibis): 104013025
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Entry
104013025 CDS
T05756
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nni03021
]
104013025 (TAF1B)
Transcription machinery [BR:
nni03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
104013025 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
N6_Mtase
Motif
Other DBs
NCBI-GeneID:
104013025
NCBI-ProteinID:
XP_009463740
LinkDB
All DBs
Position
Unknown
AA seq
587 aa
AA seq
DB search
MDSEIAAWCSSGKRDFNERCAQCSEVNWGLTDGGRFYCRSCHNVTERTREVVNADFVSNV
RIQTISKGLRKQEKTDGGCEWYVCEGFQLVLKKQAEALEALGVHPQMKDEILCNFWRRYL
QKSKQAYCNRPAGETVKAFSVCDSSTDVDSEPERPSLLHLLSLSESEGDLQTDCSFASST
SKVSESTSVCSGSVDGTWYLMKNQKDKLRMTMPMTLSFCYMALLWLREPMTLSDLLRFVV
EGHIPYLNVFQHFPEKMKLYGLDLKIFCVESWPVYEEVYSKMLELAAFLDLPRFPDITDS
CFLHPDMLCMKYLMEANLPDELHNWTCRVVKKICIGEVDFLTLVPGNKSTRNVKYDVLAA
AVIVVVLKLLFLLDDHYEWLLSDFAEERNKNNKEGGPYFEFKKWYKVIKCSLDVEQKKLD
EERAKYLWRCEKPLFYSAQKKSKVLKRRQMVVNLQNQFGKLSGSVRPAEKPNPSSFQLRW
SEENTDGSCFHGHSLKGILQEKCGLLTAMNPDYWLCTVKLCTEKLCGHLAHYREVDFPQS
YHFVLRLFSFLLRVEPSYIHDEVCVIEHKLFNKKLYKKPKYNTGLRK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgagatagcagcttggtgctcctctggaaagagagattttaatgaacgctgt
gctcagtgttcagaagtgaactggggtctcactgatggaggcagattttattgcagatct
tgccacaatgttactgagagaactagagaagttgtaaatgctgattttgtttctaatgta
agaatccagacaatctccaaaggtttaagaaagcaggaaaaaacagatggaggctgtgaa
tggtatgtttgtgaaggctttcagcttgtgctcaagaaacaagctgaagctttggaagcg
ttaggagtacatccacaaatgaaggatgaaattctgtgcaatttttggaggcgttatctt
cagaagagcaaacaggcgtattgcaacagaccggctggggaaactgtcaaagcattctca
gtatgcgatagcagtaccgatgtggacagtgaaccagagagacctagccttcttcacttg
ttgtctctctctgaaagtgagggggatctacaaactgattgcagctttgcctcatcaact
agcaaggtctcagaaagcacctctgtgtgctctggatcggtagatggtacctggtattta
atgaagaaccaaaaggacaaactgaggatgacgatgccaatgaccctttcattttgttac
atggcattactctggttgagagaaccaatgacgttatctgatctcttaaggtttgtcgtt
gaaggtcatattccatatttgaatgtttttcagcattttccagagaagatgaaattatac
ggacttgatcttaagatcttttgtgtagagtcgtggcctgtatatgaggaagtatacagc
aaaatgcttgagcttgcagcgtttttagacctgcctcgttttccagatataacagacagc
tgctttcttcatccagacatgttgtgcatgaagtacttgatggaagctaatttacctgat
gaattgcataattggacttgtcgagtggtgaaaaagatctgtattggagaagtggatttc
ctcactcttgtgcctggaaataagtcaacaagaaacgtgaaatacgatgttcttgctgca
gcagttattgtagttgtgctcaaattattgtttttattagatgatcactatgaatggtta
ctttcagactttgctgaagaaagaaataaaaataacaaagaaggtggtccgtattttgag
ttcaaaaagtggtacaaggttataaaatgttccttggatgtagagcaaaagaaattggac
gaagaaagagccaagtatctgtggagatgtgaaaagccactgttttattcagcgcagaag
aaatctaaagttcttaagagaagacaaatggttgtgaacttacaaaatcagtttggcaag
ctgtctggttcagtgcgacctgctgagaagccaaatccttcaagttttcagttacgttgg
tctgaagaaaacacagatgggagctgttttcacgggcatagcctgaagggaattttgcaa
gaaaaatgtggtttacttaccgccatgaaccctgactattggctgtgtacagttaaacta
tgtactgagaaattgtgtggtcatctggctcattacagagaagtggactttccccagagt
taccattttgtgctaaggttattctcctttcttctgagggtagagccctcgtatatccat
gacgaggtgtgtgtgatagaacacaaactttttaataaaaaactctataaaaagccaaaa
tacaacacaggcctaaggaagtaa
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