Nipponia nippon (crested ibis): 104013139
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Entry
104013139 CDS
T05756
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nni03000
]
104013139 (SOX13)
Transcription factors [BR:
nni03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104013139 (SOX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
104013139
NCBI-ProteinID:
XP_009463878
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MSMRSPVSSHLELDGAGSMVNCTIKTEEKKEGGYESPPGAAPSTEPRPNDPPGPPPREGT
DPQALPQVGPMAVTSTGPGWESRSPAGDALEPRRSAFEPAVSGQEKLDFNRNLKEVMPTI
EKLLSSDWKERLLGRNTPPSKEVKGTQESLAEKELQLLVMINQLSTLRDQLLTAHSEQKN
MAAMLFEKQQQQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFTPS
HQPLPVTPDSQLALPIQPIPCKPVDYPVQLLHSPPPPTLKRPAGSGHLQMQETSQPLNLT
AKPKGSDLPSASSSPSLKMSGCQSLTPSHGASRDLQTSPSNLPLGFLGEGDAITKAIQDA
RQLLHGHSGTMEGSLSNPYRKDHVGIDSSPVKERMEETPAHRLDEALLTCEMDGSRHFPE
SRNNNHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQ
ARLSRQHLEKYPDYKYKPRPKRTCIVEGKRLRVGEYKALMRNRRQDARQGYLIGPQGSQM
PPASSDVLYQRPVGMQLTPPLMEHYLPRSMDPSMPVIVNTRSLKEGDGGDDGHSVADGEM
YRYSEEEDSEGEDKSDGELVVLTD
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaggagccctgtttcttcccacctggagctcgatggagcaggcagcatggtg
aactgcaccatcaagacggaggagaagaaggagggcggctatgagtccccgccgggggct
gcccccagcaccgagccccgtcccaacgacccgccggggccaccgccgagggagggcacc
gacccccaggccctgccgcaggtgggtcccatggctgtgacaagcactggtcctggctgg
gagtcccgctcgcccgccggcgatgcgctggagccccggcgctctgccttcgagccggcc
gtcagcggccaggagaagctggacttcaacaggaacttgaaggaggtgatgccaaccatc
gagaaattactgtccagtgactggaaggagcggctgctggggcgaaacacccccccgtcc
aaggaagtgaaaggaacccaggagagcctggcggagaaggagctccagttacttgtcatg
atcaaccagctgtccacactgcgggaccagctcctgacggcccactcggagcagaagaac
atggccgcgatgctcttcgagaagcagcagcagcagatggagctggcacggcagcagcaa
gagcagatcgccaagcagcagcagcagctcatccagcagcagcacaaaatcaacctgctg
cagcaacagatccagcaggtcaacatgccctacgtcatgattcctgccttcacccccagc
caccagcctctccctgtcactcctgactcccagttagcgctgcccatccagcccatcccc
tgcaaaccagtggattacccggtgcagctgctgcacagcccccctcctcccacgctgaag
agacccgctggctcgggccacctccagatgcaggagacctcgcagccgctgaacctgacg
gccaaacccaaaggttctgacctccccagtgcctccagctcgcccagtttgaagatgagt
ggctgccagtccctcacgccgagtcacggggccagcagggacctgcagaccagcccgtcc
aacctgcctctggggttcctgggcgaaggcgatgccatcaccaaagccatccaggacgcg
cggcagctgctgcatggccacagcgggaccatggagggatcgctgagcaacccctaccgc
aaggaccacgttgggattgattcttccccagtgaaggagcggatggaggagacccctgcc
caccggctggacgaggctctgttgacctgtgagatggacggctcacggcacttccccgag
tccaggaacaacaaccacatcaagcggcccatgaacgccttcatggtgtgggcgaaggac
gagaggaggaagattttgcaggccttcccggacatgcacaactccagcatcagcaagatc
ctgggctcccggtggaaatccatgacgaaccaggagaagcagccctactatgaggagcaa
gcccggctgagccggcagcacctggagaaataccctgactataagtacaagccccgaccc
aaacgcacctgcatcgtggaggggaagcggctgcgcgtgggcgagtacaaggcattgatg
aggaaccggcggcaggacgccaggcagggctacttgatagggccccagggcagccagatg
ccccccgcctcctcggacgtgctgtaccagcggccggtgggcatgcagctgacgcccccc
ctgatggagcactacctgccccgcagcatggaccccagcatgcccgtcatcgtcaacacg
cgcagcctcaaggagggtgacggcggggatgatgggcactcggtggccgacggtgagatg
taccgctacagcgaggaggaggactcggagggcgaggacaagagcgatggcgagctggtg
gtgctgacggactga
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