Nipponia nippon (crested ibis): 104013190
Help
Entry
104013190 CDS
T05756
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
104013190 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nni03036
]
104013190 (ERCC6)
03400 DNA repair and recombination proteins [BR:
nni03400
]
104013190 (ERCC6)
Chromosome and associated proteins [BR:
nni03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104013190 (ERCC6)
DNA repair and recombination proteins [BR:
nni03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
104013190 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
TFIIF_beta
Motif
Other DBs
NCBI-GeneID:
104013190
NCBI-ProteinID:
XP_009463949
LinkDB
All DBs
Position
Unknown
AA seq
1499 aa
AA seq
DB search
MPTDNSQLPGSIQEQDPVTTSSNNCLHNAEELGIEQENGICNSDLGNSIRVPNSASQSST
TMAVPLEVPRRGQPLLQINRQHIQSISYSAQAAELKGLGVDVYDQDVLEQGVLQQVDNAI
NEANKATKIADAEKEYRSVLDDLRSCTTSLKQVNKIIEQLSPQAADNKDINRKLDSVKRQ
KYNKEQQLKKIKAKQKRLQAILGGTEILDKVNEIEFEEDEEPGPSCLGSMLMPVQETEWE
ELIRTGQMTPFGTKIPQKPERKTRRLMLNEASDFERYLADQAKLASERKKLCLRKGAKKK
AQAKTIQCVAPTSTTKEKRGKALSKTDKRLKKHMRKLQKHALQIQSKAEIPKEKKYLEAK
KFRREREDDSGESEYVPDEELFDPEASEEEEEQASSHAENDSDYELRNVSIKRKNLVKRD
FKEAEDDADFFPSSEEEEHTLGKRKVKRWRDDGDEDYYKQRLRRWQKERLKDKEHQTAEE
LSEESDTEFEEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIA
FLAGLSYSKIRTRGSNYRYQGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAILHETGSYT
DKKVKLIREIASCHGILITSYSYIRLMQDNIHSYDWHYVILDEGHKIRNPNAAVTLACKQ
FRTPHRIILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQV
KTAYKCACVLRDTINPYLLRRMKADVKMSLSLPDKNEQVLFCRLTDEQRQVYQNFINSKE
VYEILNGDMQIFSGLVALRKICNHPDLFSGGPRILKDVPDAEVEEADQFGYWKRSGKMIV
VESLLKIWHKQGHRVLFFTQSRQMLQILEVFVRDRNYSYLRMDGTTTIASRQPLITRYNE
DKSIFIFLLTTRVGGIGVNLTGADRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLL
TAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLCELFTLSSPDVSQGTETSAIFA
GTGSDVQVPKHQLKRKLEKPPDDISKGDLHLTESSSPKYSKPSNSYPTTHMTNSSSKTTE
TSEETKGNLEAFDQNSYAKENAQAATNINSLNKSKEESLERADKSTSQSLPGDAGSSENA
KCLNAMVADEVCGAANANVKGDFSLTCGAAGSWEKQVAKTEDEHLGNNHYKCTSKTKHRV
DVLSHESHKDKSKKKHHKDAKFEGERIPHLVKQKRYRRENSEEKEEDSKKNDDYVLEKLF
KKSGVHSVMKHDAIMEASSADHVLVEAEANRVAQDALRALKVSRQRCLGAASGVPTWTGM
SGLSGAPSAIKSRFGQKRNPTLLSSHSTCASPAKKCKDADTIKKENLKKCNSNGHFDGKS
GESSSSALDSSSLLAKMRARNHLILPQQTGNEGDENHQQAPAPAPGPTEYDELLVDVRNF
IAFQARMDGEASTQEILQEFESKLPVAQSCVFRELLRNLCTFHRSPNGEGVWRLKPEFR
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atgccaacagacaacagccaactgccaggcagtatccaagaacaagaccctgttactact
tcaagcaataattgcctgcataatgctgaggaattgggaattgaacaagaaaatggcatt
tgtaacagtgacctgggtaatagtattagagttcccaactctgccagccagtcatccact
accatggctgttcctttggaggtgcccagaagaggacaaccccttttacagatcaacagg
cagcatattcagtccatctcatatagtgcacaggctgctgagctcaaaggtttaggagtt
gatgtctatgaccaggatgtattggagcaaggagttcttcagcaagtagataatgcaatt
aatgaagctaataaagcaacaaaaatagctgatgcagagaaagaatatcggtcagtgctg
gatgacttaagatcatgtacaacatctctgaaacaagtaaataaaattattgagcaactt
tcacctcaagctgctgacaacaaagatataaacagaaaactagattctgtaaaacggcaa
aaatataacaaggagcaacagctaaagaagatcaaagcaaaacaaaagcgtctgcaagca
attcttggtggaacagagattcttgataaagtaaatgagattgagttcgaggaagatgaa
gaacctggtccatcgtgtcttggcagtatgcttatgcctgttcaggaaacagagtgggaa
gagcttattcgtactggccagatgactccatttggaactaaaatacctcagaagccagag
aggaagacacgacggttaatgctaaatgaagcatctgattttgagaggtacttagcagac
caagctaagctggcatctgaaagaaagaagttatgccttcgcaaaggagcaaagaagaaa
gcacaggccaaaaccattcagtgcgtagctcccacatctactacaaaggaaaaaaggggt
aaagccctgtcaaaaacagataagcgcttaaaaaagcacatgagaaaacttcagaagcat
gcccttcagattcaatcaaaggcagagattccaaaagaaaagaagtatcttgaggccaag
aagttcaggcgtgaacgggaggatgatagtggagagtctgagtatgtacctgatgaggag
ctctttgatccagaagcatcagaagaggaggaagagcaggcatcttcccatgctgagaat
gattctgattatgaactcaggaatgtgtcaataaaaagaaaaaacttggttaagagagat
tttaaagaagctgaagatgatgctgacttctttccaagctctgaggaagaagagcataca
ctggggaagcgcaaagtaaagagatggagagatgatggagatgaagactattataaacag
agactaaggaggtggcaaaaagaacgtttgaaggataaagaacatcaaacagctgaggaa
ctttcggaagaaagtgacactgaatttgaagagggtttcaaagtaccaggatttctcttc
aaaaagctttttaagtaccagcagacaggtgttaggtggctctgggaattgcactgccag
caggcaggaggaattctgggagatgagatgggattgggcaagaccatccagataattgcc
ttcttggcaggtctgagctacagcaagatcaggactcgtggttcaaattacaggtaccag
ggattgggtccaacagtgattgtttgtccagctactgtgatgcatcagtgggtaaaagaa
ttccacacttggtggcctccatttagagtcgctattctccatgaaactggttcttatacc
gacaaaaaggtgaaactaattcgtgaaattgcttcatgccatggaattttaattacgtct
tattcatacattcgactgatgcaggataacatccacagctatgactggcattatgtgatt
ctggatgagggtcacaaaatccgaaacccaaatgccgcagtcacacttgcatgcaagcag
ttccgcacaccccatcgaatcatcttgtctggctcccctatgcaaaataacctaaaggag
ctctggtccctctttgactttgtattcccagggaaattgggaacactacctgtgttcatg
gagcaattttctgttccaataaccatgggaggatattccaatgcctctcctgtccaggta
aaaactgcatacaaatgtgcctgtgtgttacgggacaccataaacccctacttgctgcga
agaatgaaggctgatgtaaaaatgagcctttcacttccagataaaaatgaacaggtcctc
ttttgccgtttgacagatgagcagcgtcaagtttatcaaaatttcatcaactctaaagaa
gtttacgagattctcaatggagacatgcagattttctcaggactagttgctttgagaaag
atttgcaaccatcctgacctcttctctggtggtcccaggattttgaaggatgtacctgat
gctgaagtggaggaagcagatcagtttggatattggaaacgttctggaaaaatgatagtg
gtagaatccttgctgaaaatatggcacaagcagggtcacagagtgttgttttttactcag
tcaagacagatgctgcagatacttgaagtctttgtgagagacagaaactattcctacctc
aggatggatggcaccacaacaatagcttccagacagccccttataacaagatataatgag
gacaaatccatatttatttttcttctaacaactcgtgttggtggcattggagttaacttg
actggtgctgaccgggttattatttacgatcctgactggaatcccagtacagacacacag
gctcgggaacgtgcttggagaataggccaaaagaaacaggtgactgtgtataggcttctc
actgcaggtactattgaagagaagatataccacagacaaatcttcaaacagtttttaacg
aacagagtgctgaaagaccctaagcagaggcgctttttcaaatccaatgacctttgtgaa
ctttttactctgagcagcccagatgtgtctcagggtacagaaacaagtgcaatttttgca
ggtactggttcagatgttcaagtcccaaaacaccaattgaaacggaaacttgaaaagcca
cctgatgacatatctaaaggtgatctccatcttacagaaagcagctcaccaaagtacagc
aagccatcgaattcctacccaaccacccacatgacaaattcttcttctaaaacaacagag
acaagtgaggaaaccaaaggaaatttggaagcctttgaccaaaatagctatgcaaaagag
aatgcacaagctgctactaatataaattcattaaataaaagcaaggaggaaagcttggaa
agagctgacaaatctacgtcccagtcattgccaggtgatgcagggtcttcagagaatgcc
aaatgtctgaacgccatggtggctgatgaagtatgtggagctgctaatgcaaatgtcaag
ggagattttagccttacatgtggtgcggctggctcttgggaaaagcaggttgctaaaact
gaagatgaacacttaggtaataatcattataaatgtacctcaaaaacaaagcacagggtg
gatgtgctgtcacatgaaagccacaaggataagtctaagaagaaacatcacaaagatgcc
aaatttgaaggagagcgcattcctcatctcgtaaaacaaaagcgatacagaagggagaac
agtgaagagaaggaggaagactcaaagaaaaatgacgattatgtcttggagaaacttttc
aaaaaatcaggggtacacagtgttatgaagcatgatgccattatggaagcttccagtgca
gatcatgtgctggtagaagcagaagcaaacagagtggcccaggatgccttaagagcctta
aaagtctctcgacagcgatgtttaggagctgcttctggtgtgccaacctggacagggatg
agtggtctttcaggtgcaccatcagcaataaagagtcggtttggtcaaaaaagaaacccc
acgctcctttcttcacattccacttgtgcatcacctgcgaagaagtgcaaggatgcagat
acaataaagaaagaaaacttgaagaagtgtaattccaacgggcactttgatggaaaatct
ggagaatcatcatccagtgcactagactcttcatctttattagctaagatgagggcaaga
aaccaccttattttaccgcaacagacagggaatgagggagatgagaatcatcagcaagca
cctgccccagccccaggtccaacagaatatgatgaactgcttgtggatgtgcgtaacttc
atagcgtttcaggcccgcatggacggcgaagctagcactcaggaaatactgcaagaattt
gagtccaaactgcctgtggctcagtcctgcgtctttagagaacttctccgcaatctctgc
accttccataggagcccaaatggtgaaggtgtctggaggctaaagccagaattccgctga
DBGET
integrated database retrieval system
