Nipponia nippon (crested ibis): 104013272
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Entry
104013272 CDS
T05756
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nni03036
]
104013272
Enzymes [BR:
nni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
104013272
Chromosome and associated proteins [BR:
nni03036
]
Eukaryotic type
Gene silencing
piRNA pathway
104013272
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
CS
DEAD
Helicase_C
Helicase_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
104013272
NCBI-ProteinID:
XP_009464032
LinkDB
All DBs
Position
Unknown
AA seq
1193 aa
AA seq
DB search
MEVLVLEIENPGCFWVTVKGCGPYVVDEMEYKILNAEMNQFYDKSSKNVDEVKPVMVEEG
QTCVVFSEELKCWCRAVIKSIMYCTDHYQTECFLVDYAKYIFVKSKDIRIALEAFMQIPY
RAKKCRLYRTKPVTLRIDFCEDTAKIVPAKRWDSAATRYFQNLLKGTTQMKAKLCAVEDN
IFDVFLYVTIKDEKVCVNDDLVSKNFARFEEAKENTGSSADYEENQTSLNVECLPVKTVN
PALAFRPVLFQEKVSTNVETALAVCTSFLEETYQRSSTDLNENNAPSFQNLSEERNFVFL
SNKIEPSSVLETAPLFGDLKKELTRKKFLGPNFTESYCWPPVARGCDVVAISYQGNDPFL
YIPPVLTFLQSGSCYKALPNRNGPLALILCPGWKKAQLVFELLKAYERCSRQLHPMLIIL
GQNKEEARNVKIRGCEVIVTTPYSLLRLFEHHSLLFCRLCHLVLDEIEVLFSDATEEVFT
ILDCYKKAIISEEREYSPHQIVGVGTRWNKHIAHLIKEFMNDPYIVVTAMEEASIYGNVQ
QVVRRCTNSERTAVLLKILDFTHSNLQKVLVFTNSVNEAEMVHKALKSNSIFSLKMHKES
EFNFKYILEQWTKKYSSGTHVVLVLTDDCMQSLGITDATCVVHFSFPSPRIFGQRLHSMS
DNFCNVIKGSSVDQEYTKARSVILLTENSACHALGMLRYLQHAEAEIPPELHEFAAKMLE
AEEDKKFSRPLCAYLKTFGICKNRTVCPDRHQINLQIDVPQNVPAKIIPTPGCVTILPLH
IVNATNYFGRIVDKQKDQYTILAEEINEYFKKPSNKISVKNVEKLAFYGLCEKTLFHRVQ
VVEISPKEEENVFFNIKIKYIDEGRTSQVQSYQLLHLPARFQCLPPQAVEFVVCRVKPID
NEIEWNPKVTNYIHHKIKGKLHEAKIVHTLGNTAWVDPMVRVTRLSDLKMSVNEYNIRSE
ILSTGLGTDNPEHITQLQKLCGHVKVLNHAKKLEPLSIKEDTAGPENESNPQNMSIQENA
TENCNSSEITLGNHPCDGVAQTKEAEDSTLHQRKCFYPEIKWFQNEETVTVKVKIASVAD
CKCEFAKEKVVFSARSGDKFYLADMELHQYILAEKSTYVIKDKETIIVLVKEKKGAWCKL
MKSKNPHVSFDFEHWEDFEDKSPFPVGTKKLYCTAATEEVVDSSEDSGTESDE
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcttggtattagagattgaaaatccaggttgcttttgggttactgtgaaagga
tgtgggccttacgtagtcgatgaaatggaatataaaatcctgaatgctgaaatgaatcag
ttctatgacaaatcttctaaaaatgtggatgaagtaaaaccagtaatggtagaagaaggc
cagacttgtgtggttttcagtgaagaactcaaatgctggtgcagagcggttattaagtca
atcatgtactgtacagatcattatcaaactgaatgttttcttgtggattatgccaaatac
atttttgttaaatcaaaggacattcgaattgcactggaagcatttatgcagatcccatat
agagcaaaaaagtgtagactgtatcggacaaagccagtgacgttgcgtattgacttctgt
gaagatactgcaaaaatagtaccagccaaaagatgggatagtgctgctactcggtatttt
caaaaccttctcaaaggaactacccaaatgaaagccaagttatgtgctgtagaagataac
atatttgatgtttttctttatgtgacaataaaagatgaaaaggtatgcgttaatgacgat
cttgtctcaaagaactttgctcgtttcgaggaagctaaagagaatacagggagttctgca
gattacgaggagaaccaaacatcattaaatgttgagtgtcttccagtgaaaactgttaat
cctgcgcttgctttcaggccagtgctgtttcaggagaaggtatcaacaaatgttgaaaca
gctcttgctgtttgcacttcctttcttgaagagacgtaccaaaggtcaagcacagatcta
aatgaaaataatgcacctagttttcaaaatcttagtgaagaaagaaactttgtctttctt
agcaacaaaattgagccatcatcagttctggaaacagcaccactttttggtgatctgaaa
aaggaacttactcggaaaaaatttttaggccctaacttcacagaatcttactgttggcca
ccagtagctcgaggatgtgatgtagttgccatctcgtatcagggaaatgatcctttttta
tatattccaccagttcttacatttttgcagtcgggaagttgctacaaagccttgccaaac
aggaatggaccgctagcgcttattttatgtcctgggtggaagaaggcacaacttgttttt
gagctactgaaggcatacgagagatgctccagacagcttcatccaatgttgataatactt
gggcagaacaaagaagaagccagaaatgtgaaaatccgaggatgtgaagtaatcgtgact
acaccgtatagcctcctgagactgtttgaacatcacagtttattattttgtagactttgc
catcttgttcttgatgaaattgaggtactgttctcggacgctactgaagaggtttttact
atattagattgttacaagaaagccattatttctgaagagcgggagtattcaccgcatcaa
attgttggtgttggaactcgttggaataaacatatagcacacttgataaaggagttcatg
aacgatccttacattgtggtaacagctatggaagaagcttccatctacggaaatgtgcaa
caggttgtgcgacgttgcacaaacagcgagagaactgctgtgttactcaaaatactggat
tttactcacagtaatcttcagaaggtgctggtattcactaattcagtaaatgaagcagaa
atggttcataaggcactgaagagcaattcaatattttccttgaaaatgcataaagagagc
gagtttaatttcaagtatatcttagagcagtggacaaaaaagtatagttctggcactcat
gttgtgttagttttaacagatgactgcatgcagtctttgggaattacggatgcgacttgt
gtggtacacttcagttttccttctccaagaatctttggtcagcgtctacacagcatgtct
gacaacttctgtaatgtgataaagggttcttctgtagatcaggaatatacaaaggcaagg
tcagtcattctactaacagaaaacagtgcatgtcatgcacttgggatgctgcgctatttg
cagcatgcagaagctgaaattccaccagaactgcatgagtttgctgccaagatgctagaa
gctgaagaagataagaaattttcaaggccactgtgtgcttatcttaaaacatttgggatt
tgcaagaatagaacagtgtgtccagatcgtcatcaaattaatttacaaatagacgtgccc
cagaatgtaccagctaaaattataccaacgcctggatgtgtgacaatactgcctctccac
atcgtaaatgcaacaaactacttcggtcgaatagtagataaacaaaaggaccaatataca
attcttgctgaagaaattaatgagtattttaagaaacctagtaataaaatttctgttaaa
aatgtggaaaagctagcgttttatggattgtgtgagaagacactttttcacagggttcag
gtggtagagatttccccaaaagaggaggaaaatgtgttctttaacatcaaaattaaatat
atagatgaaggcagaacaagtcaagttcagagctatcaactgcttcacttacctgcaagg
tttcagtgtctgccacctcaggctgtggaatttgtagtttgtagagtgaagcccattgat
aatgaaattgaatggaacccaaaggtaactaattatattcatcacaaaattaaaggaaaa
ctacatgaagcaaaaatagtacataccttgggaaatacagcttgggttgacccaatggtc
cgggttaccaggctttcagatttgaagatgtctgtcaatgaatacaacattcgatctgag
attttgtctacgggtctgggaactgacaatccagaacatataacgcaacttcagaagttg
tgcggacacgtgaaggtattaaatcatgcaaagaaattggagcctttaagcataaaggaa
gatacagctggtccagagaatgagtccaatccacagaatatgtcaatacaagaaaatgct
actgaaaactgtaattcctctgaaattactttggggaatcatccatgtgacggtgtagct
caaactaaggaggcagaagactctaccctgcatcagcgtaaatgcttttatccagaaata
aaatggtttcaaaacgaagagactgttacagtgaaggtaaaaatagcaagtgtagctgac
tgtaaatgtgagttcgctaaggagaaggtggttttcagtgctcgttcaggagacaaattt
tatttggctgacatggagctgcatcaatatatacttgcagaaaagtctacatatgtgatt
aaggataaagagactattattgttcttgtgaaagagaaaaaaggagcatggtgcaaatta
atgaagagcaagaatcctcatgtgtcttttgattttgaacactgggaagattttgaagat
aaaagcccttttccagttggtactaaaaaattgtattgcactgctgcaaccgaagaagtg
gttgactcctcagaagacagtggaacagaaagtgatgagtaa
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integrated database retrieval system
