Nipponia nippon (crested ibis): 104013475
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Entry
104013475 CDS
T05756
Symbol
HERC4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104013475 (HERC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nni04121
]
104013475 (HERC4)
Enzymes [BR:
nni01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104013475 (HERC4)
Ubiquitin system [BR:
nni04121
]
Ubiquitin ligases (E3)
HECT type E3
104013475 (HERC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
104013475
NCBI-ProteinID:
XP_009464256
LinkDB
All DBs
Position
Unknown
AA seq
1056 aa
AA seq
DB search
MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGC
NDLGQLGHEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPG
TEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNS
PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLR
TQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSVVTQIT
CGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGNWLPYSTQCPIITDSEE
CYCVKKIFSGGDQSFAHYFYPQNMVPPDDFRYPDFLKQIWTVNETFIQRLLTFPSGRLPV
EIANEIDGTFSSAGCLNGSFLALSNDDHYKTSTRFSGVDMNAARLLFHKLIQPDHAHISQ
QVAASLEKNLIPKLTSSLPDVEALRLYLTLPECPLMSDANNFTTLAIPFGTAILNLEKAP
LKVLENWWSVLEPPLFLKIVELYKDVVVHLLKLCKIGIPASERRILTNFLHTAFRVLEIL
HRVNERGQVIQYDRFYIHEIQDLIDIRNDYVNWVQQQVFGMDVNHGLTELTDIPVTICTY
PFVFDAQAKTTLLQTDAVIQMQMAVDQAHRQNLSSLFLPVFESVNPCLILMVRRDNIVGD
AVEVLRKTKNVDYKKPLKVIFVGEEAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEESRL
IWFSDKTFEDSDLFHLIGVVCGLAIYNFTIVDLHFPLALYKKLLNKKPSLDDLKELMPDV
GRGMQQLLDYPEDDIEEAFCLNFTITVENFGTTEIKELVPNGADIPVVKQNRQDFVDAYV
DYIFNRSVASLFSAFHAGFHKVCGGKVLQLFQPSELQAMVIGNTNYDWKELEKNTEYKGE
YWADHPTIKIFWEVFHELSLEKKKQFLLFLTGSDRIPILGMKCLKLVIQPTGGGEGYLPV
AHTCFNLLDLPKYTDKETLKSKLIQAIDHYEGFSLV
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgctggggaaatgcatcttttggacagcttggattgggtggaattgatgaagag
attgttttagaacccagaaaaagtgactttttcttaaataaaagggtcagagatgtagga
tgtggactgagacatactgtttttgtcctggatgatgggactgtttatacatgtggatgc
aatgatctaggacagctagggcatgaaaaagccaggaaaagacccgagcatgttggtgca
ctggatgcccaaaatattgtagctgtatcgtgtggagaagcccacactcttgcattaaat
gacaaaggtcaggtatacgcttggggtctggctactgatggacagcttggcttgccggga
acagaggaatgcatcagagtgcccagaaatattaaaagcctatcagagatccaaattgtt
caagttgcctgtggttattatcactcattagcactctcaaaaggaagtgaagtattttcc
tggggacaaaataaatatggccagctgggcttaggttatgagtataaaaaacaaaactcc
ccacatgtgatcaaatctctgctgggaatcccttttgcacagattgcagcaggaggagct
catagttttgtactaactctttctggagccatttttggatggggacgaaacaaatttggg
cagctgggtcttaatgatgataatgacaggtatgttcctacgctgctaaagtcactgaga
actcagaaggttgttcatatatgttgtggagaagatcatactgctgcccttacaaaggaa
ggtggggtttttacatttggagctggaggctatggtcagttgggtcataactctaccagc
cacgagataaacccaaggaaagtttttgaacttatgggaagtgttgtgacgcaaatcact
tgtggcaggcagcacactactgcgtttgttccttcatctggaagaatttattcttttgga
ctcggaggtaatgggcaattaggtacaggcacaaccagtaataggaaaagtcccttcaca
gtaaaaggaaactggcttccttatagtactcaatgcccgataatcacagacagtgaggag
tgttattgtgtaaagaaaattttttctggtggggaccaaagttttgcacactacttttat
ccacagaacatggtgccaccagatgactttaggtatcctgactttttgaagcagatctgg
actgtgaatgaaacgtttattcaaagattgctgactttcccatctggaagacttcctgta
gagatagctaatgaaattgatggaacattctcttcagctgggtgtctgaatggcagcttt
ttggctttgagcaatgatgatcattacaaaaccagcactagattctcaggggttgatatg
aatgctgctagactactatttcacaaacttatacagcctgaccacgctcatatatcacaa
caggtggcagctagtttggaaaagaaccttattcccaagctgaccagctccttaccagat
gttgaagctttgaggctgtatctcactctaccagaatgcccactgatgagtgatgcaaac
aatttcacaacattagctattccctttggaacagctattctgaacctagaaaaagctccg
ctgaaagttcttgaaaattggtggtctgtacttgaacctccattgtttctcaagatagtg
gaactctacaaggatgttgtagtccacctcttgaagttgtgcaagattggcattccagct
tctgaaagaagaatacttaccaattttctacacacggctttcagagttctggaaatattg
catagagtaaatgaaagaggacaagttatacagtacgacagattttacattcatgagata
caagatttgatagatatcagaaatgactatgtcaactgggtccagcagcaggtatttgga
atggatgtcaaccatggattaactgagttaacagatattcctgttacaatttgcacatac
ccatttgtatttgatgcccaggcaaagacaactctcctacaaacagatgcagtcatacag
atgcagatggctgttgatcaggctcacaggcagaatttgtcttctctctttctgccagta
tttgaatctgtcaacccatgcctgatactaatggtacggagagacaatattgtaggagat
gctgtcgaagtcctgagaaaaacaaagaatgtagactacaagaagccactcaaggttatt
tttgtaggggaagaagctgttgatgctggaggtgttcgcaaagaattttttttgctcatc
atgagggagttgctagatcccaaatatggaatgttcaggtattatgaagagtccaggctg
atctggttctctgacaagacctttgaagacagcgacttgtttcatttgattggtgttgtc
tgtgggctagcaatatataattttactattgtagaccttcatttccctttggctttgtac
aaaaaactattgaataagaaaccatccctggatgacttaaaagagttgatgccagatgtt
ggcaggggaatgcaacagttactggactatccagaggatgacatagaagaagcattttgt
cttaattttactatcactgtggaaaattttggtacaacagaaattaaagagcttgttcct
aatggtgctgacattcccgtagtcaaacaaaataggcaagattttgtagatgcatatgtg
gattacatcttcaatagatctgtggcttccttattcagtgcattccatgcaggcttccac
aaagtatgtggaggtaaagttcttcagctcttccagcccagcgagttgcaggcaatggtg
attgggaacacaaattatgattggaaagaattggagaagaatacagaatacaaaggagaa
tactgggcagaccatcctacaattaaaatattctgggaggtttttcatgagttgtctttg
gagaagaaaaaacagtttttgttgtttctgacaggcagtgatcgtattccaattcttgga
atgaagtgtcttaaactagtcatccagccaacaggaggtggagaaggttatcttccggta
gctcacacttgctttaatcttcttgatcttccaaaatacacagataaagaaaccctaaaa
tctaagttgatccaggctatagatcactacgaaggtttcagtttagtataa
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