Nipponia nippon (crested ibis): 104013538
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Entry
104013538 CDS
T05756
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nni03009
]
104013538
03036 Chromosome and associated proteins [BR:
nni03036
]
104013538
Enzymes [BR:
nni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104013538
Ribosome biogenesis [BR:
nni03009
]
Eukaryotic type
Pre-60S particles
Helicases
104013538
Chromosome and associated proteins [BR:
nni03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104013538
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
104013538
NCBI-ProteinID:
XP_009464337
LinkDB
All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
MCVYFHLPPCCSVPYQKEKKEKKSKRHDKSRRRRTQTDESEQSEDDTDSPKLKKSRSGIK
QNGDAREESSENTRLSSLNVKSTHKKRHSNSSETSSGDGDSEQEQEMTEEQKEGAFSNFS
ISKGTVQLLQARGVTYLFPVQVKTFDPVYSGKDVIAQARTGTGKTFSFAIPLIEKLQGDS
QERRRGRSPKVLVLCPTRELANQVAKDFKDITRKLTVACFYGGTPYNGQIDLMRSGIDIL
VGTPGRIKDHLQNGKLDLTKVKHVVLDEVDQMLDMGFAEQVEDILRVAYKKDSEDNPQTL
LFSATCPHWVYDVAKKYMKSRYEQIDLIGKRTQKAATTVEHLAIECHWSQRAAVIGDVIQ
VYSGSHGRTIVFCETKKEANELALNASIKQDCQSLHGDIPQKQREITLKGFRNGTFKVLV
ATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGRTGRAGRTGICICFYQRKEEHQLRYV
EQKAGITFKRVGVPTATDIIKASSKDAMRCLDSVPQTAIEYFKESARLLIQEKGPVNALA
AALAHISGAXXXXXXXXLLNSDAGFVTMILRCSEEINNMSYAWRRLRELLGDDVDRKVNR
MCFLKGKMGVCFDIPAADQKEIEARWEDSKQWRLCVATELPELVESQRGGGGGGNGRSFS
SSRNGRRGSSGRNRFRSRGQKRSFDRAFDR
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgtgtattttcatttaccgccgtgctgctctgtgccttaccagaaggagaaaaaa
gagaagaaatctaaacgccatgacaaatctcggaggaggaggactcagacggatgaaagt
gagcagtcggaggatgacactgattctccgaagctcaagaagtcaaggagtggaattaaa
caaaacggtgatgcaagagaagaaagctcggagaacacgagattatcttccttaaacgtt
aaatccacccacaaaaaacggcacagtaattctagtgaaacgtcaagtggtgatggtgac
agtgagcaagagcaggagatgactgaagaacagaaagagggtgctttctccaatttttct
atttccaaagggactgttcagcttcttcaagctcgaggagtgacgtacctgtttcccgtg
caagtgaagaccttcgacccagtatattctggcaaagatgtaattgctcaagcacgaact
ggaacagggaaaacattctcttttgctattcccttaattgaaaagcttcagggagattca
caggaaagaagaagaggccgttcaccaaaggtactagttctttgcccaacgagagagctg
gcaaaccaggttgccaaagatttcaaggacatcacgagaaagctaacagtggcttgcttt
tatggaggaactccatataatggacaaattgatctcatgagaagcggcattgacattttg
gttgggacacctggtcgaatcaaagaccatcttcagaatggcaagctggaccttaccaaa
gtgaaacatgttgtacttgatgaagttgaccagatgctggacatgggatttgctgagcaa
gtggaagacattttacgagtggcatacaagaaggattctgaagacaatccccagacgctg
ctgttttctgcaacttgcccacattgggtgtatgatgtggctaagaaatacatgaagtct
agatatgaacagattgaccttatcgggaaaagaactcaaaaggctgctacaacagtagaa
catttggcaatagagtgtcactggtctcagagagctgcggttattggagatgtcattcag
gtctacagtggcagccatgggaggaccatcgtcttttgtgagaccaaaaaggaggcaaat
gaactggctctgaatgcttcaatcaaacaggattgccagtcgttgcatggtgacattcct
cagaagcaaagagagatcacgctgaaaggttttagaaacggtacatttaaagttctggtt
gcaaccaacgtagctgcccgtggtttagatatccctgaagttgacctggttgtacaaagt
tcaccaccaaaggatgtggagtcctatatccatcgttctggacgcacaggtcgagctgga
cgaactgggatctgtatctgtttttatcagcgaaaggaagaacatcagttaagatatgtg
gaacaaaaagcgggcattacgttcaagcgtgttggtgttcctactgcaacagatataata
aaggcttccagcaaagatgccatgaggtgtctggattctgttcctcaaactgctattgag
tatttcaaagaatctgctcggttgctaatacaagaaaagggaccagttaatgctctggct
gcagctctagcccatatttcaggtgctnnnnnnnnnnnnnnnnnnnnnnnnctgctgaac
tcggatgcgggatttgttacaatgatactacgctgctctgaagagataaacaatatgagc
tatgcttggcgaagactacgagagctgttgggtgatgatgttgataggaaggtgaacaga
atgtgtttcctcaagggaaaaatgggtgtgtgctttgatattcctgcagcagaccaaaag
gaaatagaggcaagatgggaagattcaaaacaatggcgtttgtgcgtggcgactgaatta
ccggagttagtagaatcacagcgaggaggaggaggcggcggaaatggccgaagcttctca
agctccaggaatgggcggcgtggtagctctggtagaaacagattcagaagcagaggccag
aaacgaagttttgacagagcatttgatcgttaa
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