Nipponia nippon (crested ibis): 104013539
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Entry
104013539 CDS
T05756
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nni03009
]
104013539
03036 Chromosome and associated proteins [BR:
nni03036
]
104013539
Enzymes [BR:
nni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104013539
Ribosome biogenesis [BR:
nni03009
]
Eukaryotic type
Pre-60S particles
Helicases
104013539
Chromosome and associated proteins [BR:
nni03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104013539
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
AAA_22
UTP25_NTPase-like
Motif
Other DBs
NCBI-GeneID:
104013539
NCBI-ProteinID:
XP_009464338
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MPAFPQQEETQEKVLKRREKLKRRGKAEGEQAQPEESGLGDGDLEPPLPKKTKKVKEKSS
GLAGERNGSEHTVKRSSAVSTDVTSPAAQSAFSDVAAGEQDSDTEELTEEAKEGAFSNFP
LSQNTVNLLKARGVKYLFPVQVKTFQPIYDGKDVIAQARTGTGKTFSFALPLTEKLQSVL
QDGRRGRSPKVLVLVPTRELATQVAKDFKNLTRKLSVACFYGGTPYKAQLDLLKSGIDIL
VGTPGRIKDHIQNSKLELSGVKHVVLDEVDHMLDMGFAEQVEEILGFAYKKGSENNPQTL
LFSATCPRWVYDVAKKYMKDEYEQIDLIGKKTQRTATTVEHLAIQCRSSQRAGVLGDIIQ
VYSGSHGRTIVFCETKKEANELAMNASLKQDAQSLHGDIPQKQREVTLKGFRSGVFEVLI
ATNVAARGLDIPEVDLVIQCSPPKDVDSYIHRSGRTGRAGRTGICICLFQRREEDLLKQV
EHKAGITFKRVGVPSATDVIKASSSDAKKLLEAVPPSAVDYFRKSAQELIDEKGAVDALA
AALAHISGASYVQQRSLLNSTAGFVTMVLKCSIEMRTMSYAWRGLKEQLGEEVDAKVSAM
RFLKGKTGVCFDIPVGELSNIQEQWKDTRRWQLSVAEELPELEEYPQEAGRGFSRFGNGR
QGDGGFKRNSWFKNGNRGHDFNRSLD
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctttccctcagcaggaggagacccaggagaaggtgctgaagcggcgggagaag
ctgaagcggcgcggtaaagcggagggcgagcaggcccagcctgaggagagcgggctgggc
gacggtgaccttgagcctcccctgcccaagaagacaaaaaaagtcaaggagaagagcagc
ggtctggcaggagagcgcaatggctccgagcatacggtgaaacgttcctccgctgtgagc
accgacgtgacgtccccggcagcccagagcgcattcagcgacgtggcagctggagagcag
gacagcgacacggaggagctgacagaagaagcaaaagaaggcgccttctccaattttcct
ctctcccaaaacaccgtcaaccttctcaaagctcgaggtgtaaaatacctgttccctgtg
caagtgaagacttttcagcccatatatgacggcaaagacgtaattgctcaagctcgaaca
ggaacggggaaaaccttttcttttgctcttccgctgactgaaaaacttcagagtgtcttg
caagatggaagaagaggccgttcaccaaaagttctggttcttgttccaaccagggaactg
gccactcaggtcgccaaagacttcaagaatctcaccaggaaactgtcagtggcttgtttt
tatggaggaactccatataaagcacagcttgatctccttaaaagtggcattgatattcta
gtgggaactcctggacggatcaaagatcacattcagaatagcaagctggaactttccggt
gtgaagcatgttgttttggatgaagttgaccacatgttagacatgggctttgctgaacaa
gtggaagaaatcttaggatttgcttataaaaaaggttctgaaaacaacccccagacactg
ctgttttctgcaacttgcccacgatgggtgtatgatgtagcaaaaaaatacatgaaagat
gaatatgaacagattgacctgattggaaagaaaactcaaaggactgccacgactgtggaa
cacttggctatacagtgtcgctcatctcagagagcaggagttcttggggacatcattcaa
gtttacagtggcagccacgggcggaccattgtcttttgtgagaccaaaaaggaagcaaat
gaactggctatgaatgcttcgctcaaacaggatgctcagtcattgcatggtgacattcca
cagaagcagagagaagttaccttaaaaggctttagaagtggtgtgtttgaagttctgatt
gcaacaaacgtagctgcccgtggtttggatattcctgaggttgaccttgttatacagtgt
tcaccaccaaaagatgttgattcctacatccatcgttctggacgtacgggtcgagctggc
cggaccgggatctgcatttgtttatttcagagaagagaagaagatcttctgaaacaagtt
gagcacaaagcggggattacatttaagcgcgtaggtgttccctctgctacagatgtaatt
aaagcttcaagtagtgatgccaaaaagttgttggaggccgttcctccttctgcagtagac
tacttcagaaaatctgctcaagagctcatagacgaaaaaggggcagtcgacgccctggct
gcagctctagcccatatttctggggcatcttacgtacagcagcgctccttactcaactca
actgcgggctttgtgaccatggtgttaaagtgttcaatagaaatgcgtacgatgagctac
gcctggcgaggactaaaagaacagcttggtgaggaagtagatgccaaagtatctgcaatg
cgtttcctcaaggggaagacgggggtgtgctttgatatccctgttggcgaactgagtaac
atacaggaacagtggaaggacaccaggcgctggcagctgtcggtggcagaggaattgcct
gagctggaagagtacccccaggaggcaggacgagggttctccaggttcggaaacgggagg
caaggtgacggtggcttcaagaggaacagctggtttaagaatggaaaccggggacatgat
tttaacaggtcacttgattaa
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