Nipponia nippon (crested ibis): 104013583
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Entry
104013583 CDS
T05756
Symbol
LSM8
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03018
RNA degradation
nni03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104013583 (LSM8)
09123 Folding, sorting and degradation
03018 RNA degradation
104013583 (LSM8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nni03019
]
104013583 (LSM8)
03041 Spliceosome [BR:
nni03041
]
104013583 (LSM8)
Messenger RNA biogenesis [BR:
nni03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104013583 (LSM8)
mRNA degradation factors
5'-3' decay
Lsm complex
104013583 (LSM8)
Spliceosome [BR:
nni03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
104013583 (LSM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
CBS
Motif
Other DBs
NCBI-GeneID:
104013583
NCBI-ProteinID:
XP_009464380
LinkDB
All DBs
Position
Unknown
AA seq
109 aa
AA seq
DB search
MNVSVNANTSISDISKHFLNELLGTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFS
SSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVVH
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtttcagtaaatgctaatacttctatttcagatatctctaaacatttccttaat
gaactgttaggtactgttgcagtaattacttctgatggaagaatgattgtgggaaccctc
aaaggttttgatcagaccattaacttgattttggatgaaagccatgagcgagtgttcagt
tcttcacaaggagttgagcaagtagtgctgggattatacatcgtaagaggtgataatgtt
gctgtcattggtgaaattgatgaagagacagactcagctcttgacttggggaatattcga
gcagaacctttaaactcagttgtgcattga
DBGET
integrated database retrieval system
