Nipponia nippon (crested ibis): 104014221
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Entry
104014221 CDS
T05756
Symbol
GEMIN5
Name
(RefSeq) LOW QUALITY PROTEIN: gem-associated protein 5
KO
K13133
gem associated protein 5
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nni03019
]
104014221 (GEMIN5)
03041 Spliceosome [BR:
nni03041
]
104014221 (GEMIN5)
Messenger RNA biogenesis [BR:
nni03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104014221 (GEMIN5)
mRNA cycle factors
P-body specific factors
104014221 (GEMIN5)
Spliceosome [BR:
nni03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
104014221 (GEMIN5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GEMI5_RBS
TPR_GEMI5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
EIF3I
DSE1_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT140_1st
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_TEP1_2nd
PAC11
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
WD40_RFWD3
ASA1
Beta-prop_WDR41
WD_LRWD1
TPR_IF140-IFT172
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
104014221
NCBI-ProteinID:
XP_009465115
LinkDB
All DBs
Position
Unknown
AA seq
1370 aa
AA seq
DB search
MVVIIDISREREVRKREVLHRLRGHDDEIHCLAWCPVPGEERLPAWQDELQVVPSEEGEV
PNGELTQDTTTKKGCYLASGSKDQTIRIWSCTRGRSVMTLKLPPTKRRGGAVDPAVKERI
WLTVHWPPGRSTEIVSSGFGGELLLWDLTQSGKRKWTLLGSSEGQNHSRIVFNLCSVKHQ
DKELLFSISMDRDVKCWDLSTLDCSWTMPSLGGFVYSLAFSPVDTGCLAIGVGDSMIRVW
NTLSMNNIYDVKTFWQSIKSKVTALAWHPTKEGCLAFGTDDGKVGIFDTFSSSAKNKPPQ
ISSTYHKKTVYTLAWGPPTPPLSSGGDGEQPSVTLYSCAGEGIVFQHNPWKLNGEANDIN
KVIRDTNSIKHKLPARTEISWKPDGKLLALGNEDGSIEIFQAPNLKLLCTIQQHHKLINA
IRWHHEHGSQPELSYLIASGSINATIYVHNLKSVSEGTPESPLTITEPFRTLAGHTAKIT
SLSWSPHHEGRLVSACYDGTAQVWDVMKEEPLCNYRGHQGRLLSVQWSPVDSDAVYTGAD
DFSVHKWHISKQEHTRPPQGKKSIELEKKRSMQPKVKTKKKKKPIGKSPAKQDLSDAVNG
DESAKEMLPEENGVSDHEGEKEAQEAELPNKVSMTVSKDTSSPAYDYSSFSLPKPFVTQK
AIPVKKDPPKDKPTPDASLKKRKPRSILPFSTFMDHRSKDELHQDCLRLATCLKNKDNNE
DVSPDLKDRIHLGLFADRASLHKMIDVEGKHHLENGHPELFQQLMLWKGDMKGVLQAAAE
RGELTDQLVAISPMVGYQAWVWTVEAFVKQLCFQEQYVKAASHLLSIHKVYEAVELLKVN
HFYREAIVIAKARLRPEDPILRDLYTSWAALLEKDGHYSMAAKCYLGASSPYDAVKVLAK
KGDATSLKTAAELALVSGEEELSATLSFRCAQDLLLSRNWVGAQEVLQQHKTLFGQRLVF
CLNELLCKCLSERNPCNRKSLVPPCYHSWELNREASFFDMVVEVWQNVLGMDTAEQATCA
REQLHSIEHPPSTSNTPPKQVLFRISHDLTLAALSYQTATWDEAVKSILGAVTRSYDAGN
FTLMQEICSIILPEGCDNLRRKLDSTNSESMDACRSLEGFVAYERLYDLWWNPPKDSLVL
QKAVLDPVLCPSEQTALEKSYVSGQSSSEETPDQTAVEMDENLCNTTEVHRCETESDSRT
SSVDLVEGQSKLNGCEVLLSEEIAALQNTQRDIAEVQQILADMIRQHQQQRNNLQENTNG
STQESNLQQSSETESDKPRSDSSQMNCKDEVKEPITLPELTKQLLKAKQKLAEFPDNLKV
FPFPDVLECCLVLLHIGSRCPPELHEQALDLLRKHGSADIYKKAGRRFLT
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atggtggttataattgatatcagcagagaaagagaagtgaggaaaagagaagtacttcat
cgactaagaggccatgacgatgaaatacactgtctggcctggtgccctgtccctggtgaa
gaaaggttgcctgcttggcaagatgagctccaagtagttccttcagaggaaggcgaagtt
ccaaatggggagctgacacaggacacaaccacgaagaaaggttgttacctggcttcggga
agcaaagatcagaccatacgaatatggagctgtactagaggcagaagtgtaatgactttg
aagttgccacccacgaagagaagaggtggagctgttgatcctgctgttaaagagcgcatt
tggctgactgttcactggccgcctggtcgttccacagaaattgtatccagcggttttgga
ggagaactgctgctctgggatttgacccaatctggaaaacgcaagtggacacttctagga
tcttcagaaggacaaaatcactcccgtattgtcttcaatctgtgttctgtgaagcatcag
gacaaagagctccttttttccatttcaatggacagagatgtgaagtgctgggacctatca
actctcgattgtagctggaccatgccctcgcttgggggatttgtctatagtcttgccttc
tcccctgtggacacaggctgtcttgccataggtgttggagacagcatgatccgggtgtgg
aatactttgtccatgaacaatatttatgacgttaaaaccttctggcaaagcataaagtcc
aaggttacagcattagcctggcatccaactaaggaaggctgcttggcgtttggaacagat
gatggaaaagttggcatatttgacactttctccagcagtgctaagaataagccacctcag
atctccagtacttaccacaagaagactgtatacacattagcctgggggcctccgactcct
cctctgtcttctggaggagacggtgaacagccctctgtaactttatatagttgtgctgga
gaaggtattgtttttcaacacaacccctggaagcttaatggagaggcaaatgacattaac
aaagtcatccgagacactaattcaatcaaacacaaactgcctgcgcgtactgagatcagc
tggaaaccagatggcaaactcttggctcttggcaatgaagatggctcaattgaaatattt
caggcgccaaacttgaagttgctctgcactatccagcaacatcataaactgattaacgct
attcgttggcatcacgagcatgggagccagccagagctgagttacttgatagcttcaggc
tcaatcaatgccactatttatgtgcataatctgaagagcgtttcagagggcactccagaa
agtcctttgacaataacggagccttttcgaactctggctgggcacacagctaaaatcaca
agtctttcttggagcccccaccatgagggaagattggtatctgcttgctatgatggcact
gcacaggtatgggatgttatgaaggaagagccactctgtaactaccgggggcaccagggc
cgcctactgagtgtccagtggtcaccagtggattcagatgctgtttatacaggagcagat
gatttttctgttcacaaatggcacatctcaaagcaggagcacacacggcctcctcagggc
aaaaagagtatagaattagagaaaaaaagaagtatgcaaccgaaagtcaaaaccaagaag
aagaaaaagcccataggaaagagtccagccaagcaggatctaagtgatgccgtgaatgga
gatgagagcgcgaaggaaatgttgccagaggaaaatggagtgtcggaccatgaaggagaa
aaagaagctcaggaggcagagttgcccaataaagtctccatgactgtgtccaaggataca
tcttcacctgcatatgattattcttcattcagcttgccaaagccttttgtgacccagaaa
gccattcctgtgaaaaaggatccacctaaagacaaaccaactcctgatgcctctctgaag
aagaggaagcctcgttctattctacccttcagcacattcatggatcacagatcaaaagat
gaattgcatcaggactgcttgaggctggctacatgtctgaaaaacaaagataataatgaa
gatgtgtcccctgacctcaaggatcgcatccacctggggctgttcgcagacagggcttct
ctgcacaagatgattgatgtggaaggaaaacatcacttggagaatgggcatccagagctc
tttcagcagcttatgttgtggaaaggagatatgaagggtgtcctccaggcagctgctgag
aggggagagctaacagaccagctggtagcaatctcacccatggttggatatcaggcctgg
gtttggacagtagaagcctttgtgaagcagctgtgttttcaggagcagtatgtgaaggct
gcctcccatctcctgtccatccataaagtgtacgaggctgtcgagctcctgaaagtgaac
catttttacagggaagcaattgtaattgctaaggccaggttgcgtccagaagatccaatt
ctgagggatctctacaccagttgggcagctctgttagagaaagatggtcattattccatg
gccgccaaatgttatttgggggcttcctcaccctatgatgcagttaaggtgttggcaaaa
aagggggatgcgacatcccttaaaactgctgctgagcttgcgctggtgtctggagaggag
gagttgtcagcaactttgtctttcagatgcgcccaagacctgctgctatcgcggaactgg
gtgggagctcaggaagtccttcagcaacataaaactttatttggacagagacttgttttc
tgccttaacgaactgctttgcaagtgccttagtgaaagaaatccctgtaaccgaaagagc
ctggtgcctccctgttaccacagctgggagctgaacagagaggcctcattttttgacatg
gtggtagaagtgtggcagaatgtattgggcatggacaccgctgagcaagccacatgtgca
cgggagcagctgcacagtattgagcatcctccttctaccagcaacacacccccaaagcag
gtgcttttccgtatctcccatgacctaacccttgcagccctgagctatcagactgctacc
tgggatgaggcagtgaaaagtattcttggagctgtgacccgcagttatgatgctggcaat
ttcactctgatgcaagagatttgcagtatcatccttcctgaaggctgtgataacctaaga
cgcaaactggacagcacgaattctgagagcatggacgcttgcagaagtttggagggcttt
gtggcttacgaacggctgtatgacctgtggtggaacccacccaaagactcccttgtcttg
caaaaggctgttttggatcctgtgctgtgtcccagtgagcagacggctcttgagaagagt
tacgtttcaggtcagtcctcctctgaagaaactcctgatcaaactgcagttgagatggat
gaaaatctctgcaatacaactgaagttcataggtgtgagacagaaagtgactcaagaact
agctcagtcgatttggtagagggacagtcaaaattgaatggctgcgaagtgcttctttca
gaagagattgctgctttacagaacacccagagagatatagctgaggtccagcagatttta
gcagatatgatccgccagcaccagcagcagaggaacaatctccaggaaaacacaaatgga
agcacccaggaaagcaacctgcagcagagttcagagactgaatcagacaaaccacgctct
gacagcagccagatgaattgtaaagatgaagtaaaggaaccaattacgctccctgagcta
acaaagcaacttctaaaagcaaagcagaaactagcagaatttccagacaatttaaaggtc
ttcccgttccccgacgtgctggaatgctgccttgtcctccttcacattggatcccggtgc
cctccggaactacacgaacaggcgctggatctccttaggaaacacggtagcgctgatatt
tacaaaaaggctggcaggaggttcttgacgtga
DBGET
integrated database retrieval system
