Nipponia nippon (crested ibis): 104014263
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Entry
104014263 CDS
T05756
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nni03000
]
104014263 (SOX30)
Transcription factors [BR:
nni03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104014263 (SOX30)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
104014263
NCBI-ProteinID:
XP_009465160
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MERRRPRTQPAHRPLPAATAEAARRPPRLAGAEGGTAAAAGEAKVPLRVLHIKVEEPEPE
GRDPPACRGDEFRGSPALWGGKEEARGAIKRERDYDKGSGESQSEVKVLEKRGNGKEPWR
GGAVKAEPPDPAVEACRVKMEKGDAPAGPLCGPAHASTDDRKAQRCEGLGILPEDLKIPV
VFHPLPPGTRLQIQGPLPSELIHVAKVPAKQVPLKMQSLLEPSVKIETKNVPLTVLPSDS
GMPDTPFSKDKSGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWSKLTEEQ
KQPYYDEAQKIKQRHREEFPGWVYQPRPGKRKRFPLPVSAVFSGTSQSIIATNPAGFCPF
QSPAYSVVIPNVKNSIGRPVCEAPAIRLPPSSIQHAGPITLFQTTSASTASAAVPAPTLP
LRPVISPQPFAEPAQTEALDVSSGLSCSLKRPTPVFIESFSRNPSNIPTTNGRFSVSNSE
PPKEYPGVSIFPRGVPLPQATPFLHSHLYESPPVGQPASLFGVPPRFSFHHPYFVPGPHY
FPSSTCPFSRPPFGCGNFSSSAPECLGFYEDRYQRQEVMFSALDGAYPFKEYPEASIREN
HRSCESLEVTSCHNSCNEERYLSPLPQLDVRALEEVLSATSSTPSSIHLINVTDSDEEEV
KLLREL
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggagaggcggcggccgcgcacgcagcccgcccaccgcccgctccccgcagcgacggcc
gaggcagcccgccggcccccccgcctggccggcgcggagggggggacggcggccgcagcg
ggggaggccaaggtccccctcagggtgctgcacatcaaagtggaggagcccgagccggag
gggagagatcccccggcctgccgcggcgacgagttcaggggctccccagctctgtggggg
ggtaaagaggaggcccgcggcgccatcaagagagaaagggactatgacaagggcagcggg
gaaagccagagcgaggtgaaggtgctggagaagagggggaatgggaaggagccctggaga
ggaggcgctgtcaaagcggagccgcctgacccggccgttgaggcctgcagggtgaagatg
gaaaagggcgatgccccggctggccccctgtgtgggcctgctcatgccagcaccgatgac
cgcaaggcgcagcggtgcgaggggttggggatcctccctgaagatctgaagatcccagtt
gtgtttcaccccttacctcctgggacccgcttacagatccaaggccctctgccgtcagag
ctgatccatgtggctaaagtgccggcgaaacaagtgccgcttaaaatgcagtctttactg
gagccttcagtaaagattgaaaccaaaaatgttcccctcacagtactgccctccgactca
ggtatgccagatactccatttagcaaggacaaaagtggccatgtaaagcgtccgatgaac
gcatttatggtgtgggccaggatccatcggcccgccctagcaaaagctaacccagctgcc
aataatgcagaaatcagtgttcagcttggattggagtggagcaaactgactgaagagcag
aagcagccctattatgatgaagctcagaaaataaaacaaaggcaccgagaggaatttcct
ggttgggtttatcaaccacgaccaggcaaaaggaagcgttttccactgcctgtctctgct
gtattttccggcacttctcagagtatcatcgctacaaatccagctggcttttgtcccttc
cagtcacctgcttactctgttgtcatccccaatgttaagaacagtattggacgtccagtc
tgtgaggctcctgccatccgtctgccaccttcttccattcaacatgctggtccaatcact
cttttccagactactagtgcaagcactgcatcagcggctgttccagctccaaccttgccc
ctgcgccctgtaatttcaccacagccctttgctgaacctgctcagacagaagctcttgat
gtatcatccgggctcagttgctctctgaagagacctacaccagttttcattgagagcttc
agcagaaacccaagtaacatacccaccactaatggcagattttctgtctctaatagtgag
cccccaaaggaatacccaggggtttctatttttcctagaggtgtacctcttccccaggct
accccttttcttcactcacatctctatgagtctcctcccgttggtcagccagccagtctc
tttggagtacctcctcggttttcatttcaccacccttactttgtacctggacctcactat
ttcccctcaagcacatgcccattcagccgacctccatttggctgtgggaatttctccagc
tcagcgcctgaatgccttggcttttacgaagacaggtaccaaagacaggaggtgatgttt
tcagctctggacggagcctatcctttcaaggaatacccagaagcaagcatacgtgagaac
caccgcagctgtgagagccttgaagtaacgtcctgtcacaacagctgcaacgaggagcgg
tatttaagccctctgccgcagctggacgtcagagcactggaggaggttttgtcagccacc
tcatctactccctccagcatccacctaatcaatgtaactgacagcgatgaggaagaagta
aagttgttgcgagaattgtaa
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