Nipponia nippon (crested ibis): 104014298
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Entry
104014298 CDS
T05756
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nni03019
]
104014298 (HELZ)
Messenger RNA biogenesis [BR:
nni03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
104014298 (HELZ)
3'-5' decay
Other 3'-5' decay factors
104014298 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
zf-CCCH
AAA_30
AAA_19
UvrD-helicase
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
zf-CCCH_4
AAA_22
AAA_16
AAA_5
AAA_7
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
104014298
NCBI-ProteinID:
XP_009465202
LinkDB
All DBs
Position
Unknown
AA seq
1959 aa
AA seq
DB search
MADRRPEKSCEQACESLKQQDYEVAVKHCTEALLSLSQYPPAHLPEACQAEIDRIKIETL
LYRIASFLQLKKYGQADEDCRHVLGEGLAKGDGSFRAVLCCMHLKGKLQIVSNVLSKSLM
GESLNGMVTKDLTRLKTLLAETEAAGKVPSGYHVEDLEEGSRDGWQFRPPPRGVTSSEEY
TLCKRFLEQGICRYGAQCTSAHSQEELTEWQKRYASRLIRLKQQKENKQCSGSYMETLIE
KWMNSLSPEKVLSECVEGVRVEHNPELSVTVTTKKSHQTWTFALTCKPARMLYRVALLYD
AHRPHFSIVAISAGDSTTQVSQEVPENCQEWIGGKMVQNGIDHYIYKVSIAFNTEIFGTF
RQTVVFDFGLEPVLMQRVMIDAASTEDLEYLMHARQQLLTTAKRWDSTSKTIVEFEPNET
TELEKSLLTRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNIK
VQLQIVASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVTK
EKSAQTQGTKEKVYEAAIEEKTKDYIFLRVSRECCEELNLRADCEMQVELQFQLNRLPLC
EMHYALDRIKDNSILFPDVSMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQL
PPVLIIGPYGTGKTFTLAQAVKHILQQQDTRILICTHSNSAADLYIKDYLHPYVEAGNPQ
ARPLRVYFRNRWVKTVHPVVHQYCLISSTHSTFQMPQKEDILKQRVVVVTLNTSQYLCQL
DLEPGFFTHILLDEAAQAMECETIMPLALANKNTRIVLAGDHMQLSPFVYSEFARERNLH
VSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPLT
FFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQVF
RIRAELRKKRLSDVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKRKEQLLEDSTE
DLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENESLHGIT
FEQIKAQLEALELKKTYVLNPLAPEFIPRALRHQHSANATKQQQSPPKGKVHHHNQNDHF
PPDGIVQPNPSVLIGNPIRAYTPPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVYG
GNMVMSVPSPPPLWHVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQAHGRGSPIPYGLGH
HSPVSIGQQQQLQHQDKEQHEQSRNGKSENTAGPEINKIRTPEKKPVESKQADLEANSQN
RSPESRSSVGYPNAKFHRKDNLNPRQLNLHLTPPHSQYAVPNRHFQHVSQIPRQPYPLQQ
QQNLLSQQQNHLPEQQNQMPPQQSQVVQQHNHLNQQPPQPSQLSPAYQAGTSQSFFNNPI
PHRPHSPAVDAVISEQHPPPMLQEVNNPLRPIAQHNPVLPTHLNNFIEENPSGXXXXXXX
XXXXXXMPLGDTLDRMHGNVALETIRQQQQARLQQWNEHNAYLSQGPIPYQHHHHPHLPH
LPQQPIGLHQQQQVRANWKLASNTEDETEATYSRFQDLLRELSHRDQSESRDLAEMPPPQ
SRLLQYRQVQPRSPPALPSPSCNSNHSGHFPNFTENNRDIEIPSNPAFQQHLPQIYNPPF
SMPSEHITPSPLKYLQPDGSWTYANLQQNHLMGQGFHYGIPPLPHRSQQNPFIQIQNHQH
AVGQEPFHPLTSRAVSASSLHSLEEYEPRGPGRPLYQRRISSSSVQACSEELSTPQDSLG
QCKELQDHSNQSSFNYSSPELWVNSSSSAPYPNIPCNGANRAVPPWELLAPPKTVKPPEE
HLKAENIQLSNSFNYSVLQHLGQFPPLMPNKQIVESNSNSQQNAGGSKPVMSYASALRAP
PKPKPPPEQTKKNSDPLSLFQELSLGSSSGSNGFYSYFK
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagaagaccagagaagtcatgtgaacaagcatgtgaatctcttaagcagcag
gattatgaagtggcagtgaagcattgcacagaggctctcctttccctcagccagtacccc
ccagctcacctcccggaggcatgccaggcagaaatcgaccgcatcaaaatcgagactctt
ctgtatagaattgcttcctttttacaacttaaaaagtatgggcaagcagatgaagactgt
aggcatgtgctgggagaggggctggccaagggagatggatctttccgtgcagtgctctgc
tgcatgcatcttaaagggaagctgcaaattgtgtctaatgttctttccaaatcactgatg
ggtgaatcactgaacgggatggtaactaaagatctgacacgactgaaaacacttcttgct
gaaacagaggcagctggtaaagtaccatcgggatatcatgtagaagatttagaagaaggg
tcccgggatggctggcagttccgccctccacccaggggagtcacaagcagtgaagaatat
acgctatgtaaaagatttttagagcaagggatctgcaggtacggtgcacagtgtacttca
gcacattcccaggaagagctaacagaatggcaaaaacgatatgcttcccgcttgatcaga
ttaaaacagcagaaggaaaacaaacaatgttcgggcagttatatggaaaccttgattgag
aaatggatgaattcgttatctcctgagaaagtgcttagtgaatgtgtagaaggagtgaga
gtagaacataatcctgagctatcggtaactgtcaccaccaaaaagtctcatcagacatgg
acatttgctctcacttgtaagcctgcaagaatgctgtatcgagtggcattgctttatgat
gcccatcgtccacattttagtatcgttgcaatatctgctggagacagcactacccaggta
tcacaagaagttccagaaaactgtcaggaatggataggaggaaagatggtccagaacgga
atagatcattatatatacaaagtcagtatagcctttaacacagaaatctttggaactttt
cgccaaactgttgtgtttgattttggattagaaccagtcctcatgcaacgagtaatgatt
gatgctgcttcaactgaagatcttgaatacctgatgcatgcacggcaacagctactaacc
acagctaagcgttgggattctacttctaagactattgtagaatttgagcctaatgaaact
actgaattggagaagagccttcttaccagataccaaatccctctatctgctgaccagcta
tttacacaatctgtcctggacaaatcattgaccaagaccaactatcagtcacggctacat
gacctcctttatatagaggaaatagcacagtataaggaagttagcaagttcaacataaaa
gtgcaattgcagattgtagcgagcttcatgctcactggtgtttctggaggtgcaaagtat
gcccaaaatggacaactctttggccgctttaagcttactgaaacgctttcagaagacact
ttggctggacggctggtgatgaccaaagtcaatgctgtttatttattgcctgtcactaaa
gagaagtcagcacagacccaaggaaccaaagagaaggtttatgaagcagctattgaggag
aaaacaaaggattatatcttcttgagggtatccagggaatgctgtgaagaacttaatctt
cgggcagattgtgaaatgcaggttgaacttcagtttcagttaaatcgcttacccctctgt
gaaatgcattatgccttggacaggattaaggacaacagtattttgtttccagatgtcagc
atgactcccaccataccctggagtcccaacagacaatgggatgagcagttggaccctcga
ctaaatgctaagcagaaagaggctgttctggctatcactactccgctttcaatacaactg
cctcctgttcttatcatcggtccctatgggacaggaaaaacgttcactctggctcaggca
gtcaagcacatactccaacaacaggatactaggattctcatttgcacccattctaatagt
gctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaatccccag
gcaagacctctcagggtatatttcagaaatcgctgggtaaagactgtccacccagttgtg
catcagtactgtttgatttcaagcacacattccacctttcagatgccacagaaagaagac
attcttaagcaacgagtagtagttgttactttaaatacatcacagtatctatgtcaactg
gatcttgaaccaggtttttttacacacattctgttagacgaagctgcgcaggctatggag
tgtgaaactattatgcctctagcattagctaataaaaacacaaggattgtactggctgga
gaccatatgcagctcagtccttttgtctacagtgaatttgccagggaaagaaaccttcat
gtttcattgcttgatcggctctatgagcactaccctgcagaatttccatgcaggatcttg
ctgtgtgagaactatcgctcccatgaagctatcatcaattatacatctgaacttttctat
gaaggcaaattgatggcaagtggaaagcagccagcacacaaagatttctaccctttaact
ttcttcacagcacgtggagaagatgtgcaagaaaaaaatagtacagctttttacaataat
gcagaggtgtttgaagtagtagagcgtgtagaagaattaagaagaaaatggcctgttgcc
tggggcaagttggatgatggcagtataggtgtcgtaacaccttatgctgatcaagtgttc
agaattcgggctgaacttcggaaaaaaagactgtctgatgtcagtgttgagagagtgcta
aatgttcagggaaaacagtttagagttttgtttctcagcacagtacgaacacggcatacc
tgcaaacataagcaaactccaattaaaaggaaagagcagttactggaggattcaacagaa
gacttggattatggttttctgtctaattataaacttctcaacactgccattacaagagca
caatccttggtagctgtggtgggagatcctattgctttatgttccattggaagatgcagg
aaattttgggaaaggtttattgccctatgtcatgagaatgaaagtctccacggtatcaca
tttgaacagatcaaagctcagttggaagctttggagttaaagaaaacttacgtgttgaac
ccactggctcctgagtttatcccccgagctcttcggcaccaacattcagcgaatgccacc
aaacaacagcagtcaccaccaaagggcaaggtccatcatcataaccagaatgaccatttc
ccacctgatggaattgttcagcccaatccttctgttctaatcggaaatcctatccgagca
tatactcctccccctcctcctctgggacctcaccccaatctggggaaatctccaagtcct
gttcaaaggatagatccacacactgggacaagtattctatatgtacctgctgtctatgga
ggaaatatggtcatgtctgtgccttcccccccccctttatggcatgtaccatggactggg
tatcagggtaggtttgcagttgaccctcgaatcattactcatcaagcagctatggcatat
aatatgaacctgttacaggcacatgggcgtgggtctcctataccttatggcctgggacat
cattcaccagttagcataggacaacagcagcagcttcagcatcaagacaaggagcaacat
gaacaaagtcgaaatggtaaaagtgagaacactgctggacctgaaatcaataaaattaga
acacctgagaagaaacctgtggaatccaagcaggctgacttagaagcaaattctcaaaat
agaagcccagagtcacgttccagtgttggttatcctaatgctaaatttcatcgcaaagat
aatcttaaccccaggcagctgaatctacatctcaccccaccccactcacagtatgcagtt
cccaatcgccacttccagcatgtgtcacagataccaaggcagccatatcctctgcaacag
cagcaaaaccttttaagtcaacagcaaaatcatttgcctgaacaacaaaaccaaatgcct
ccccagcaaagccaggtagttcagcagcataatcatttgaatcagcagcctccacaacct
tcgcagctttcccctgcttaccaggcaggcaccagccagtctttttttaataatccaatt
ccccaccgaccacattctcctgctgtagatgctgtgatttcagaacaacaccccccacct
atgttacaagaagtcaataatcctttgaggcctattgcacagcacaaccctgttctgcca
acccacttgaacaacttcattgaagagaatccatcaggannnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnatgcccttaggggacactttagatcgtatgcatggaaatgta
gctttggaaacaataaggcagcaacaacaagccaggttacagcaatggaatgaacataat
gcctatctcagtcaaggccctattccatatcaacaccatcaccatcctcatctaccacat
cttcctcagcaaccaattggattgcatcaacagcagcaagttagggcaaactggaaactt
gccagtaatacagaagatgaaacagaggctacatattcaagattccaggatttgctcaga
gaactgtcacaccgtgatcaaagtgaaagtcgggacttagctgaaatgccaccccctcag
tcaagactgttgcaatacagacaagttcagcccagaagcccaccagcactcccttctcct
tcctgcaactctaaccacagtggtcactttcctaacttcactgaaaacaacagagacatt
gaaatacccagtaacccagcatttcagcagcatttaccccaaatatacaatccccctttc
tcaatgccatctgaacatataaccccatctcccttgaaatacctgcaacctgatggatcg
tggacttacgctaacctacagcagaatcaccttatggggcagggctttcattatggtata
cctccgttgccccataggtcgcaacaaaacccttttatacaaatacagaatcatcagcat
gcagtcggtcaggagccatttcatccactcacatctcgagcagtatctgcttcttcgctc
cacagcttagaagagtatgaaccaagaggaccaggcaggccgttgtaccaaagaagaatt
tcctctagttcagtccaggcttgttctgaagaattaagcactcctcaagacagtcttggt
cagtgtaaagagcttcaggaccacagtaaccagtcatctttcaactattcatcacctgag
ttgtgggtaaactcctcctcatctgccccatacccaaacattccatgcaacggagccaac
agagcagttccaccctgggagttgttagctccaccgaagacggtcaagcccccagaggaa
cacctgaaggccgaaaacatacagctatccaattccttcaactacagtgtgttacagcat
cttggccagttcccacctctcatgcccaacaagcagatcgtcgagtcgaacagcaacagc
cagcagaatgctggggggagcaagcctgtcatgtcctacgcaagtgctctgcgggctccg
ccaaagcccaaacctcctcctgagcagacaaaaaagaatagcgaccctttgtctttgttt
caggaacttagcctaggtagttcatcaggtagcaatggcttttactcctattttaaataa
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integrated database retrieval system
