Nipponia nippon (crested ibis): 104014405 Help Entry 104014405         CDS       T05756                                  Symbol COL3A1 Name (RefSeq) collagen alpha-1(III) chain   KO K19720   collagen type III alpha Organism nni  Nipponia nippon (crested ibis) Pathway nni04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:nni00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     104014405 (COL3A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:nni00536]     104014405 (COL3A1) Glycosaminoglycan binding proteins [BR:nni00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    104014405 (COL3A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  104014405 NCBI-ProteinID:  XP_009465330 LinkDB All DBs Position Unknown AA seq 1459 aa AA seqDB search MMSFVQKVTLLILAVFQPSVILAQQDALAGCTHLGQVYADRDVWKPEPCQICVCDSGSVL CDDILCDDQELDCPNPEIPFGECCPVCPQITPQPTTVIVARGPKGDPGSPGVPGRNGAPG PPGQPGSPGAPGPPGICQSCPSINGGSFSPQYDSYDVKAGPGGIAYPQAIAGFPGPPGPS GPPGPPGHPGPPGSAGYQGSPGEPGQPGPAGPPGPVGMIGPVGPPGKDGEPGRPGRNGDR GIPGLPGHKGHPGMPGMPGMKGQRGFDGKDGAKGDSGAPGPKGETGLPGANGSPGQPGPR GPAGERGRPGNPGGPGAHGKDGSPGAAGPPGPPGPPGPTGFPGSPGFKGEAGPPGPAGSS GSPGERGEPGPQGHAGPPGPQGPPGRAGSPGNKGEMGPSGIPGAPGLPGGRGLPGPPGTS GSPGAKGSPGEPGKNGAKGDPGPKGERGENGIPGAPGPPGEEGKRGANGEPGQNGVPGTP GERGSPGFRGLPGSNGLPGEKGPAGERGSPGPPGPSGPAGERGQDGGPGLPGMRGLPGIP GSPGSDGKPGPPGNQGETGRAGPPGPAGPRGQPGVMGFPGPKGNEGAPGKNGERGPGGPP GTPGPAGKNGDVGLPGPPGPTGASGERGEPGPAGPPGLQGLPGGPGPAGENGKPGEPGPK GEIGGPGFPGPKGENGIPGERGAQGPPGPPGTRGGPGPAGSEGAKGPPGPPGAPGGTGLP GLQGMPGERGASGSPGPKGDKVTHPSTCSANAIPGARGERGNVGPIGPPGPAGPPGDKGE TGPAGAPGPMGSRGGPGERGEQGLPGPAGFPGAPGQNGEPGGKGERGPPGLRGEAGPPGA AGPQGGPGAPGPPGPQGIKGDRGSPGGPGAAGFPGARGLPGPPGNTGSAGPPGNAGPAGK DGPPGPPGSAGAPGSPGPAGTRGEPGPPGERGAPGARGERGGPGEPGPQGIVGGRGSTGL PGLRGPSGPPGMAGAKGEDGKPGTNGIPGERGAPGPQGPIGQRGLPGEPGRDGNPGSDGL PGRDGSPGGKGDRGESGSPGPPGPPGHPGPAGSNGEPGKAGERGFQGPPGPPGSAGPAGA RGPAGPQGPRGDKGETGERGSTGIKGHRGFPGTPGLPGPPGPLGPQGAIGSPGASGARGP PGPSGPPGKDGKSGYPGPIGPPGPRGNRGDSGPAGPPGQPGLPGPAGPPGPCCGGMAGLG VGEKGPVGYGYEYRDEPKENDINLGDIISSMKSINNQIENIISPDGSRKNPARNCRDLKF CHPELKSGEYWIDPNQGCKMDAIKVYCNMETGETCISANPSTVPRKNWWTSESSGNKHVW FGESMDGGFQFSYGDPELPEDVSEVQLAFLRILSSRASQNITYHCKNSIAYMDQASGNVK KALKLMSSMESEIKAEGNSKFTYAVLEDGCTKHTGEWGKTVFEYRTRKTMRLPVVDIAPI DIGGPDQEFGVDVGPVCFL NT seq 4380 nt NT seq  +upstreamnt  +downstreamnt atgatgagctttgtgcaaaaagtaactttgctcattcttgccgtgtttcaaccctcagtt attttggcacaacaagacgcactcgcaggatgtacccatcttgggcaggtttatgctgac agggatgtttggaaaccagagccatgccaaatctgcgtgtgcgactcaggatctgttctc tgcgatgacatcctctgtgacgatcaggagctggactgtcccaacccagagattcccttt ggagagtgctgtccagtttgtccacaaataacaccacaacctacaacagtaatagttgcc cgaggccccaaaggagaccctggttctcctggagttccaggcagaaacggtgcccctggc cctccaggacagccaggtagtcctggagctcctggcccccctgggatctgccagtcgtgt cccagtataaacggaggtagtttttctccacagtatgactcctatgatgtgaaggccggt ccaggtggtatcgcttacccacaggccattgctggctttccaggaccccctggccccagt ggcccccctggcccacctggtcatccaggtccccctggctctgctggataccaaggttcc ccaggagaaccaggacagcctggccctgctggacctccaggccctgttggaatgataggc ccagttggtccaccaggaaaagatggagaaccaggaagaccaggcagaaatggagaccgt ggaatccctggattaccgggtcacaagggacaccctggaatgcctgggatgcctgggatg aaaggtcaacgaggttttgatggaaaagatggcgccaaaggtgacagcggtgctcctggt ccaaagggtgaaactggtcttcctggagcaaatggatcaccgggccaaccgggaccaaga ggtccagctggcgaaagaggaagacctgggaatcctggtggtcctggtgcccatggcaaa gacggatctccaggagcagcaggcccacctggtcccccaggtcctcctggacccacagga tttccaggctctccaggttttaagggtgaagctggtcctcctggtcctgctggttctagt ggtagtcctggagagagaggagaacctggtcctcagggtcatgctgggccacccgggcct cagggccctcctggaagagctggaagccctggcaacaagggtgaaatgggaccttctggt attcccggtgctcctggtctgccaggaggccgtggtcttcctggtcctccaggtacaagt ggaagccctggagcaaaaggcagtccaggagaacctggtaagaatggtgcaaaaggagat ccaggcccaaaaggcgaacgtggtgaaaatggcatcccaggtgctcctggacctcctggt gaggaaggcaaaagaggtgcaaatggtgaacccggccagaatggcgtacctggtacacct ggagaaaggggctcccctggtttccgtggtttacccggtagcaatggacttccaggtgaa aagggtcctgctggtgaacgtggtagcccaggtcctcctggccccagtggaccagcagga gagcgtggacaagatggaggcccaggtcttcctggaatgagaggtttgcccggaattcca ggaagccctggaagcgatgggaaacctggccctccaggtaatcaaggtgaaactggccgt gctggtccacctggccccgcaggtccacgtggtcagccaggtgtaatgggtttccctggt cctaagggcaatgagggtgcaccaggtaaaaacggagaaagaggccctggtggaccacct ggaacacctggtcctgctgggaaaaatggtgacgttggcctcccaggtcctcctggacct actggtgcttctggagagagaggagaaccaggaccagcaggtccacctggcctccaggga ttgcctggtggaccaggaccagctggagagaatggaaagcctggagaaccagggccaaaa ggtgaaattggaggacccggattcccaggccctaagggtgaaaatggtatcccaggtgaa cgtggtgcacagggtcctccaggacctcctggaacaagaggtgggccaggtcctgctggc tcagaaggtgccaagggtcctcctggaccccctggtgctcctggaggcacggggctgcct ggcttacagggaatgccaggagaaagaggagcttctggaagtcctggaccaaaaggggat aaggtaacacacccatccacatgctctgccaatgccattcctggtgcaagaggagagaga ggtaatgtaggtcccatcggtcctcctggtcctgccggcccacctggagataagggagag actggtccagcaggtgccccaggtccaatgggttcccgtggtggtcctggtgaacgagga gaacaaggtcttcctggacctgctggcttccctggagctccaggccaaaatggggaacct ggtgggaaaggagaaagaggcccacctggtctaagaggagaggctggaccccctggagct gcaggtccacaaggtggtcctggtgcaccaggtccacctggtccccaaggaataaaagga gatcgtggatctcctggaggccctggtgctgctggtttccctggtgctcgtggtctgcct ggtccccctggtaacactggtagcgcgggtccccctggtaacgcagggcctgcaggcaag gatgggcctcccggaccccctggtagcgctggtgctcctggcagtccaggacctgctgga acaagaggtgagcccggcccaccaggcgaaagaggggcaccaggagcacgaggagaaagg gggggaccaggagaaccaggtcctcaaggcatcgttggcggccggggtagcacaggtttg ccaggtctgcgtggcccgagcggtccacccggtatggcgggtgccaagggtgaagatggt aaaccaggcaccaacggtatcccaggagaacgcggtgctcctggtccacaaggtcctatt ggacaaagaggcttacctggagagcctggcagagatggtaaccctggctcagatggcttg cctggacgtgatggatccccaggaggcaaaggtgaccgtggtgaaagtggctctcctggc cctccaggacctcctggtcaccctggacctgcaggtagcaatggtgaacctggaaaagct ggtgaaagaggatttcagggtccacctggtcctcctggctctgctggtcctgctggtgct cgaggtcctgctggtcctcaaggtcctcgtggtgataaaggtgaaactggtgaaagaggc agcactggcataaagggccacagaggatttcccggtacccccggtctccctggtcctcct ggtcccctgggtccacaaggcgcaattggaagtccaggagcttcaggtgcaaggggtccc ccaggaccatctgggccgcctggaaaagatggtaaaagtggctatccaggtccaattggt cctcctggccctcgtggtaacagaggtgacagcggccctgcaggtccaccaggccagcct ggtcttcctggtcctgctggtcctcctggtccatgttgtggtggtatggctggcctcggt gttggtgaaaaaggtccagtgggctatgggtatgaatatcgagatgagccaaaagaaaat gatatcaatctgggtgacatcatatcttcaatgaaatcaattaacaaccagattgaaaac atcattagtcctgatgggtcacggaagaatccagctcgtaactgcagagatctgaaattc tgccatcctgaactcaagagtggagagtactggattgatcctaaccaaggctgcaagatg gatgctattaaagtatactgtaacatggaaactggcgagacatgcatcagtgctaacccc agcactgtgccaaggaagaactggtggaccagtgaaagcagtggaaacaaacacgtttgg tttggagaatctatggatggaggcttccagttcagctatggagatcctgagcttccagag gatgtctcggaagttcagctggccttcctccgcatcctctccagccgtgcctcccagaac atcacctaccattgcaagaacagcattgcctacatggatcaagccagtggaaatgttaaa aaagctctgaaactgatgagctctatggaaagtgagatcaaggctgaaggaaacagcaag ttcacgtatgctgttctggaagacggctgtactaaacacactggtgaatggggtaaaaca gtctttgaatacagaacgcgcaagacaatgaggttgcctgtggttgatattgcacccata gatattggtggtcctgatcaggaatttggcgtggacgttggcccggtctgcttcttataa

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