Nipponia nippon (crested ibis): 104014723
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Entry
104014723 CDS
T05756
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04512
ECM-receptor interaction
nni04514
Cell adhesion molecule (CAM) interaction
nni04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104014723 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
104014723 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104014723 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nni04131
]
104014723 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
nni04090
]
104014723 (SDC1)
00535 Proteoglycans [BR:
nni00535
]
104014723 (SDC1)
Membrane trafficking [BR:
nni04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
104014723 (SDC1)
CD molecules [BR:
nni04090
]
Proteins
104014723 (SDC1)
Proteoglycans [BR:
nni00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
104014723 (SDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
104014723
NCBI-ProteinID:
XP_009465675
LinkDB
All DBs
Position
Unknown
AA seq
306 aa
AA seq
DB search
MEKQNMQQPGKRLKAQQTTNLNLPPEDLDSSGDDDDAFSGSGIAPLTDQSRTWRAPGEPT
NSSLLATPMDFNEQPFPGIESQTEKDVVSPSATSTVVTEEPVVAVKDEVPVLGLPDEKPT
NDAVTTTVRSPTTHFPSVVHVTPSEASGTVHVLEPKIPISDVPDTTDVPEPHSTSHHEGD
ITATPTTTAPEDVVPTHEEVSEDGSGDPGDFILTKDDDLVPTRNSEVPADSGRNAKAAGA
SGIMDRKEVLGGVIAGGLVGLVFAVFLVAFMLYRMKKKDEGSYSLDEPKQSNGGYQKPHK
QEEFYA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcagaacatgcagcagcctgggaagaggctaaaagctcagcaaactacaaat
ctgaaccttcctcctgaagatcttgattcatctggtgatgatgacgatgcgttctcaggt
tcaggtatagctcccctgactgaccagtctcgcacctggagagccccaggagaaccaact
aattcctcattactggcaacaccaatggatttcaacgaacagccatttcccgggattgag
agccaaactgaaaaggatgtagtatctccttctgcaactagtactgtagtgacagaggag
ccagttgtagctgtgaaggacgaagtacccgtcctgggcttacctgatgagaaaccaaca
aatgatgcggttacaacaacagtgagaagccccactactcactttccttcagtggttcat
gtaactccttcagaagcctcaggcacagtccatgtgctcgaacctaaaatccctatatcc
gatgtgccagacactacagacgtgcctgagccccactctaccagccatcatgagggagac
atcactgccacccccacgacaacagctccagaggacgttgttcctacacatgaggaggtt
tctgaagatggctctggagacccgggagacttcatcttgactaaagatgatgatttggtc
cccacccggaactcggaagtaccggctgactctgggaggaatgccaaagcagcaggagcc
tcgggaattatggacagaaaagaagttcttggaggtgttattgctggaggactagtaggc
ttggtgtttgcagtgtttctagttgcatttatgctgtacagaatgaagaaaaaagacgaa
ggcagctattcactggatgaaccaaaacagtctaatggaggataccaaaagccacacaaa
caagaagaattctatgcataa
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