KEGG   Nipponia nippon (crested ibis): 104014723
Entry
104014723         CDS       T05756                                 
Symbol
SDC1
Name
(RefSeq) syndecan-1
  KO
K06257  syndecan 1
Organism
nni  Nipponia nippon (crested ibis)
Pathway
nni04512  ECM-receptor interaction
nni04514  Cell adhesion molecule (CAM) interaction
nni04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:nni00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    104014723 (SDC1)
   04514 Cell adhesion molecule (CAM) interaction
    104014723 (SDC1)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    104014723 (SDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nni04131]
    104014723 (SDC1)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:nni04090]
    104014723 (SDC1)
   00535 Proteoglycans [BR:nni00535]
    104014723 (SDC1)
Membrane trafficking [BR:nni04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    104014723 (SDC1)
CD molecules [BR:nni04090]
 Proteins
  104014723 (SDC1)
Proteoglycans [BR:nni00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   104014723 (SDC1)
SSDB
Motif
Pfam: Syndecan
Other DBs
NCBI-GeneID: 104014723
NCBI-ProteinID: XP_009465675
LinkDB
Position
Unknown
AA seq 306 aa
MEKQNMQQPGKRLKAQQTTNLNLPPEDLDSSGDDDDAFSGSGIAPLTDQSRTWRAPGEPT
NSSLLATPMDFNEQPFPGIESQTEKDVVSPSATSTVVTEEPVVAVKDEVPVLGLPDEKPT
NDAVTTTVRSPTTHFPSVVHVTPSEASGTVHVLEPKIPISDVPDTTDVPEPHSTSHHEGD
ITATPTTTAPEDVVPTHEEVSEDGSGDPGDFILTKDDDLVPTRNSEVPADSGRNAKAAGA
SGIMDRKEVLGGVIAGGLVGLVFAVFLVAFMLYRMKKKDEGSYSLDEPKQSNGGYQKPHK
QEEFYA
NT seq 921 nt   +upstreamnt  +downstreamnt
atggagaagcagaacatgcagcagcctgggaagaggctaaaagctcagcaaactacaaat
ctgaaccttcctcctgaagatcttgattcatctggtgatgatgacgatgcgttctcaggt
tcaggtatagctcccctgactgaccagtctcgcacctggagagccccaggagaaccaact
aattcctcattactggcaacaccaatggatttcaacgaacagccatttcccgggattgag
agccaaactgaaaaggatgtagtatctccttctgcaactagtactgtagtgacagaggag
ccagttgtagctgtgaaggacgaagtacccgtcctgggcttacctgatgagaaaccaaca
aatgatgcggttacaacaacagtgagaagccccactactcactttccttcagtggttcat
gtaactccttcagaagcctcaggcacagtccatgtgctcgaacctaaaatccctatatcc
gatgtgccagacactacagacgtgcctgagccccactctaccagccatcatgagggagac
atcactgccacccccacgacaacagctccagaggacgttgttcctacacatgaggaggtt
tctgaagatggctctggagacccgggagacttcatcttgactaaagatgatgatttggtc
cccacccggaactcggaagtaccggctgactctgggaggaatgccaaagcagcaggagcc
tcgggaattatggacagaaaagaagttcttggaggtgttattgctggaggactagtaggc
ttggtgtttgcagtgtttctagttgcatttatgctgtacagaatgaagaaaaaagacgaa
ggcagctattcactggatgaaccaaaacagtctaatggaggataccaaaagccacacaaa
caagaagaattctatgcataa

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