Nipponia nippon (crested ibis): 104014897
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Entry
104014897 CDS
T05756
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 5 subunit alpha-like
KO
K04838
voltage-gated sodium channel type V alpha
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04261
Adrenergic signaling in cardiomyocytes
nni04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
104014897
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
104014897
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nni04040
]
104014897
Ion channels [BR:
nni04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
104014897
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
104014897
NCBI-ProteinID:
XP_009465854
LinkDB
All DBs
Position
Unknown
AA seq
1819 aa
AA seq
DB search
MDPLFWPSETNGFRRFTPESLAAIDERIAKKKKQQAKVNGENKDQGVEEDKLTPQLDLKT
CKKLPSLYGDPPVELIGEPLEDFDPYYSDHKTFMVINKRRTIFRFSAMPALCIFGPFNPV
RKAAIKILIHSLFVGFITCTVVLNCASMAVTKLPDALNWTEHLFTGIYTGEILIKILARG
FVWDEFTFLRDPWNCLDLVVTVITYVTMCKSMRKVSALRTFRVLRTLKAVSVIPGLKVIV
NSLIESVKKLTDVLILTVFCLSIFALIGLQLFMGNLTSKCVLNNTIYNDTLCKDAKIYLS
DDKDICYRMNKSSEILLCGFSSDPEXCPENYSCKKVGKNPDFGYTSFDHFGWAFLSLFRL
MTQDYWERLYRQTIRTSGKNYILFFLGVIFLCSFYLFNLILAVVTMAYEEQNRATLADTE
AKEKLLQDAQKILEKERMLAAGEGNKALHGGSEMSVADLKNSKEKEVEKEKPILRQSLIL
GDHGKEEQIFHSQPGHCHKKLRQILLSYELSVDSINDPFRRQRLMSAATVITDNLQELQE
SKLKCPSLLKRFAQTYLIWNCCPFWRAVKEKVKLVILDPFVDLLIMVCIIGNTLFMALEY
PCMPAHYQRMICISDKVFTLIFTAEMILKIIALDPYNYFQQKWNIFDSIVVMVGLISFKE
NLSSFRLLRIFKLAKSWPALNTLMKIILNSVGALGNLTLVLIITVFIFAVVGKQVLGNYY
ESNSSRISTSDDLRWHMKDFCHSFLIIFRILCGEWIETMWECMEVAGKELCLPIFLLVLV
IGNLVVLNLFIALLLSSFSTDSSMGQEETGQMTKCQIAIARIHKGLQSVKDRILDHCGKI
MKRSLKTTAKNKTSVKISAKDTEENNYAMTDVRKDIDNSCFDIWYYNTEGSSSITQKYEE
FLTSRSTCVPIAVAETYTDEGGDEHSVCTEIEYRKQGDRLRHREQCRSSSVFSQISGTSE
TLSDFSETHQKKEQKEKYDASSYSEASTVDPVILLEMFSQPKKSYLPKDCCAASCVECFP
CCVVDITKFPGSTWWKFRKTCYRIVKHSWFENFIIFMIILSSAALVFEDIHLQERKKVKM
LLEYADKIFTYIFFMEMLLKWVAYGLHSYFTNAWCWLDFIIVCVSIIFSLSHTSPCSSGS
ALKSLRTLRALRPLRALSRFEGIKVVVNALLGAIPSILNVLLVCIVFWLLFNIAGVKLLG
KKFSKCTLKKGNINLIDNKNSCIASGGTWTNSDVNFDNVAMGYLALLQVATFKGWMDIMY
AAVDSRKIDEQPKFEAFSAMYMYFVIFIIFGSFFMLNLFIGVVISNFNQQRKKISGKDLF
LTEEQKKYYNALKKLGSKKPQKPIPRPLNVFQGLLFDIVSHKAFDITVVTFICLNMVIMM
AENSENGIKDVLNKINFFFVAVFTGECVIKILALRHYFFTSGWNIFDLAVVVLSLVSIGL
SEGFRTLFSPTLLRIIRLARIGRILRLIRKARGIRTLLFALLMSLPALFNIGLLLFLVMF
IYAIVGMTNFACVGWEGGIDNLFNFQTFDSSILCLFQITTSAGWDSLLVPLLKGPDSCAP
NLNLTPEQKKNCTSKEVGILFFVSYVIISFLIVVNMYIAVILENFSVATEESTDPLCEDD
FDMFYETWGKFDPQATQFIEYSALSDFADALAEPLRIPKPNKIQLISMDLPIVSGDKIHC
LDILLAFTKRVLGESGELGGLEVHMEEKFMAANPSKVPYKPITTTLKRKQEEVSALIIQR
AFRRYLMQRSFKNKSFLYRHKRYNSAVFEEEIHEKESLIASMLNESSGRKLDKSRTTSSI
SLPLFYDGIAETDSDNVDT
NT seq
5460 nt
NT seq
+upstream
nt +downstream
nt
atggatcccttgttttggccatcagaaactaatggctttcgacgtttcacccctgagtcc
ttggcagcaatcgacgaaagaattgctaagaaaaaaaagcagcaagccaaagttaacggg
gagaataaagaccaaggagttgaagaagataaacttactcctcagcttgatctgaaaacc
tgcaaaaaactgccttctctgtatggggatcctcctgtggagcttattggggaacccctg
gaagattttgatccatactacagtgatcacaagacttttatggtgataaataaaaggagg
actattttccggtttagtgccatgcctgccttgtgtatatttggtccttttaatccagtc
agaaaagcagcaattaaaattctgatccattcattatttgttggctttattacatgtact
gtggtactcaattgcgcttccatggctgtaactaagcttccagacgcactcaactggact
gaacatctttttactggcatatatactggggaaatattgataaaaatattagcaagagga
tttgtttgggatgaatttacctttcttcgagatccatggaactgcttggatcttgtcgtt
actgtcataacgtatgttactatgtgtaaaagtatgaggaaggtttcagctcttcgaact
ttcagagtactgaggactttgaaagccgtttcagtaataccaggtctgaaagtcatcgta
aattcacttattgaatctgttaagaaacttacggatgtgttgatcttgactgttttttgc
ttgagtatatttgctctaataggcctccagctttttatgggcaatttaacatccaaatgt
gtcctcaataatactatatacaatgacacattatgtaaggatgccaagatatacttatca
gatgataaagatatctgctacagaatgaataaatcttctgaaatattgctctgtgggttc
agttcagatcctgagtaatgcccagaaaactatagctgcaagaaggttgggaagaatcct
gactttggttatacaagttttgatcattttggctgggccttcctttctttgttccgtctg
atgacacaggattactgggagcgtctctacagacaaactatccgtacatctggaaagaac
tacattttattttttctgggggtcatctttttatgctcattttatctcttcaatctgatc
ttggctgtagtaactatggcatatgaagagcaaaatagagctactcttgctgacacagag
gcaaaggaaaaattacttcaggatgcccaaaaaattctagagaaagaacggatgttggct
gctggagagggtaataaggccttacatggcggatctgaaatgtcagttgctgacttgaaa
aattcaaaagaaaaagaggtggagaaagaaaaacccattttaagacaaagcttaatatta
ggtgatcatggcaaagaggagcagatatttcattcacagcctggtcactgccacaagaag
cttaggcagatactgctgtcctatgaattgtcagtggactctattaatgatccttttcga
agacagaggttaatgagtgcagccactgttattacagataatttgcaagaactgcaagag
tcaaaactgaaatgcccatcattattgaaacgttttgctcaaacatatctgatttggaat
tgctgtccgttctggagagcagtcaaagagaaggtgaaattggtgattttggatccattt
gttgatctcttaatcatggtctgcattattgggaataccttatttatggctctggagtac
ccttgcatgccggcccattatcaacgcatgatttgtataagtgacaaggtcttcaccctg
atttttacagcagaaatgatcttgaaaatcatcgctctagatccttacaactattttcag
caaaaatggaatatttttgatagcatagttgttatggttggcctaataagctttaaagaa
aatctgtcatctttcaggctgctcaggatcttcaaattggcaaagtcctggccagcctta
aatactcttatgaaaataatcctaaactcagttggtgctctgggtaacctcactctggtt
ttgattatcactgtatttatttttgctgtagtcggaaagcaggttttaggtaattattat
gagagtaattcctctagaataagcaccagtgacgatttacgctggcatatgaaggatttt
tgtcattcattcctgattatattcagaatattatgtggagaatggattgaaaccatgtgg
gaatgtatggaagtggctggaaaagagctatgccttcccattttcttgctagtcctggtg
ataggaaacctggtggtgctcaacctattcatcgccttgctgctgagctcgttcagtact
gactcctcaatgggacaagaggaaactggacaaatgactaaatgtcagattgccattgca
cggattcacaagggcctgcagtctgtgaaagacagaattttggatcattgtggcaaaata
atgaaacgaagcctcaaaacgacagccaaaaataagacttcagtgaaaatttctgccaaa
gacacagaggaaaataactatgccatgacagatgtcagaaaggatatagacaacagttgc
tttgatatttggtattacaatactgaagggagttcctcaataacacagaaatatgaagaa
tttttaaccagtcgtagtacctgtgttcccattgcagtagcagagacttacaccgatgaa
ggtggtgatgagcacagtgtatgcacagaaatagaatatagaaaacagggagacagatta
agacatagagagcagtgccggagttcaagcgtcttcagtcagatttctgggacttctgaa
actttaagtgatttttcagaaacacaccaaaagaaagagcaaaaagagaaatatgatgct
agtagctattctgaagccagcactgtggatccagttattcttctggagatgttttcccag
cctaaaaagtcatacctacctaaggactgttgtgcagcaagttgtgttgaatgtttccca
tgttgtgtagtggatatcactaagtttccaggcagcacttggtggaaatttagaaaaacc
tgctacagaattgttaaacatagctggtttgaaaattttataatttttatgattatattg
agcagcgcagcactggtatttgaagatattcacctacaagagagaaaaaaagtgaaaatg
ctcctagagtatgctgataaaatatttacctacatcttttttatggagatgcttctgaaa
tgggtagcttatggtttgcacagttatttcacaaatgcctggtgttggcttgacttcatc
attgtatgtgtaagtattatattcagcttgtctcacacgtcaccttgttcctctgggagt
gccctgaaatctctcaggacccttagagcattgaggcctctacgagctttgtcaagattc
gaagggataaaagttgttgtgaatgcactcttgggagctatcccctcaatcctgaacgtt
ttgctcgtctgtattgtcttctggctcctatttaacattgcaggagtaaaattacttggc
aaaaaattttcaaaatgcacactcaagaaaggaaatatcaatctaattgataacaaaaat
agttgtattgcctctggtggaacatggacaaatagtgatgtaaactttgataatgttgcg
atgggatacttggctcttctccaagtggcaacttttaaaggttggatggatattatgtat
gcagcagtggattcacgtaagatagatgaacagccaaagttcgaagcattctcagccatg
tatatgtattttgtgattttcattatttttggatctttcttcatgctgaaccttttcatt
ggagtggttatcagcaattttaaccaacaaaggaaaaagataagtggaaaagatctattt
ttgactgaggaacagaaaaagtactataatgccctaaaaaaacttggatccaagaaacct
cagaaacccatcccaagaccattgaatgtgttccaaggattactgtttgatatagtatcg
cacaaagcatttgacattactgttgtgactttcatctgtctaaatatggtcattatgatg
gcagaaaatagcgagaacggcatcaaggatgttcttaataaaatcaactttttttttgtg
gcagtatttactggggaatgtgtcataaaaatactagccctaagacattacttcttcacc
agtggctggaacatatttgatttagctgtcgtggtcctgtcactagttagtattggactt
tctgaaggatttcgaactttgttctctcctacacttttgagaattattcgtttggcacga
attggccgaatcctgagattaattcgaaaagccagaggaattcgaactcttctttttgca
ttactgatgtctcttcctgcactgttcaacatcggtcttttgctttttctggttatgttc
atttatgccattgtgggcatgacaaactttgcctgtgttggctgggaaggtgggattgat
aaccttttcaactttcaaacctttgatagtagcattctctgtctcttccaaattacaaca
tcagctggctgggatagtcttttggtccctctcttaaagggacctgattcatgtgctccc
aacttaaatttaacacctgaacagaaaaaaaattgcacaagtaaggaggttggtatttta
ttttttgtaagctatgtcattatatcatttctcattgttgtaaatatgtacatagctgtc
attttagagaacttcagtgttgccactgaagaaagcacagatcctctttgtgaggatgac
tttgatatgttttatgagacctggggaaaatttgatcctcaggcaacgcagtttattgaa
tattctgctctttcagactttgcagatgctctggcagaacccttacgcattccaaagcct
aataaaattcagctcatatccatggacctccctatagtgagtggagataagatccactgc
ttggatatcttgcttgctttcactaaaagggtcttgggagaatctggggaattgggtggt
cttgaagtacacatggaagaaaaatttatggccgctaatccatctaaagttccttacaag
ccaattactactacccttaaaagaaaacaagaggaggtatcggctcttattattcaaagg
gccttcaggaggtatttgatgcagcgttcttttaaaaataaatctttcttataccgtcat
aaacgttataacagtgctgtctttgaagaagaaatacatgagaaggaaagtcttattgca
tcaatgcttaatgaaagtagtggtaggaagctagataaatcacggactacatcttccata
tctctccctttattttatgatggtattgctgaaacagatagtgataatgtggacacataa
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integrated database retrieval system
