Nipponia nippon (crested ibis): 104015060
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Entry
104015060 CDS
T05756
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nni01002
]
104015060 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nni04121
]
104015060 (USP42)
Enzymes [BR:
nni01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104015060 (USP42)
Peptidases and inhibitors [BR:
nni01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104015060 (USP42)
Ubiquitin system [BR:
nni04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104015060 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
104015060
NCBI-ProteinID:
XP_009466032
LinkDB
All DBs
Position
Unknown
AA seq
1337 aa
AA seq
DB search
MTIVNKPKSSKSKKSSSRRSDKSKKPRTKKMTSRTANLGRVPPAEDPNKVSVDKGPGGAI
YCRSSQKSKPFAQRDLVVNDGIAPPQRILFPPEKICMDWQQTQSVGVGLQNLGNTCFLNS
TLQCLTYTPPLANYMLSLEHTQSCHEEGFCMMCTMETHINQVLCCSNNAIKPTSVINGLK
RIGKHFHFGSQEDAHEFLCFTVDALQKACLNGSTKLDRSSQATTLIYQIFGGYLRSRVKC
LNCKAVSDTYEPFLDITLDIKAVTSVTRALEQFVKPEQLDGENSYKCSKCKKMVPASKRY
TIHRSSNVLTISLKRFANFTGGKINKDVKYPEYLDLRAYMSQSIGEPLIYALYAVLVHSG
FNCNAGHYLCFIKAGNGLWYRMNDASVDLSDIKTVLNQQAYVLFYIRRYDLTLGERAFYL
PAPSYPRSFLGQRGANSKQAGFMGPRLPPHMIKNSSRLNGNGPVKEDPNTVGVTLKRPSS
APPTACVQNWAITRPSITDPSKNQKITISIHNKLPARQTVSQPDCLSSAAEDEDLSKPVP
SSTITNSSAAESTSNASTMSVATNVSKQEVPDEIFVEPAVNGNPKLSSDNAVPYGAESSG
KSEESKGLFKRNCNIISSNGILIGKVVRTLQNSHSSCQNAEEERSQHELPKNDSLNGAIS
LDNESKENGLKLDDSTCQVQPVKPSEIFFSKTNGLLETMPLALSPVPQEIILESLTYSQL
NSLSEEISVPGPQKSSENDALMETVVMEALFAYEESRKVPSNFSCEVENLFTQSDSETIS
TKEEVAESIITKADNAHPNINGQHKVRKKSLDAEDEFLGQRESEDSRDKDKPRRSKEPEL
ISKENPLYIKVSPESEEELGQTSSIKSDIECSSKKLASLDITDKCQDAKDISNNYVEVPP
VNDSSITKLDKVLESQFSRENEGLSNKKCEEDKHRKKYKKKIYDSKKTDKEHYRKKRENS
DTEEREKEKQTRSKPDDHSHKRRCSRSVETNKQNRHKQEYCSESKYRSSHNERNSPNNGK
SSGKYSRYRSRSRERTEQDRNRYYHSKGDRTWSRERYYQDEPRRWEKCRYYNDYYSSHGT
RDGRERKSSHCDKDFDKSSQAYNSRSHKDYHCKSRWPHNALSREEDVHHFSSHRANLHHC
SVPQQQSEKYSRERHALPPVSAHSNFEDSSRENEKLRNGKRKYTHAEGSGSEIEKKCRKI
GDQRLKKYKKVKKKKKSKDKHREKDYKLYDLDFSVLRFDNDNRKRKKKKKKKKHIRKLKG
FLEYLDPRFQKKTREKKEESCPPGGYLSEQYRNQGSKQPYKEGKPSGAGESKKYSSITSN
EYVKDAELTDGSLQYSN
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttaacaagccaaaatcttcaaaatctaaaaaatcatcatcgaggcggtct
gacaaatctaagaaaccccgtactaaaaaaatgacgtcacgcaccgcaaatttgggccgg
gtaccacccgcagaagatccaaacaaagtctctgtggacaaaggacctggaggtgctatt
tattgtagatcatctcaaaaatctaagccttttgcccaaagagatctagttgttaatgat
ggaattgccccgccacaaaggattctttttccacctgagaaaatttgtatggattggcaa
caaacacaaagcgttggagttggactgcagaatctcggcaacacatgtttccttaattct
accctgcaatgtttgacctacacacctcctctcgccaattacatgctttctcttgaacac
acccaatcatgtcatgaagaaggcttctgtatgatgtgcacaatggaaactcacataaac
caggtcctgtgttgctctaataatgccatcaaacctacatctgttattaatggccttaaa
agaataggaaaacatttccattttggcagtcaagaggacgcacatgaattcttatgcttc
actgttgatgctttgcagaaagcttgcttaaatggaagcaccaaattggacagatcttct
caagccaccacacttatttatcaaatatttggaggatatctaagatcccgagtaaagtgc
ttgaactgcaaagcagtttcggatacatatgagccattccttgacattactttggatata
aaggcagttacatctgtcaccagagctctagaacaatttgtgaaaccggaacaactggac
ggtgaaaatagctataagtgtagcaagtgtaaaaagatggtccctgcgtccaagaggtat
acgatacatcgttcttccaacgttctcacaatatcactgaaaagatttgcaaattttaca
ggtggaaagatcaacaaggatgtaaaatatcctgaatatttggatcttcgagcatatatg
tcccaatcaattggagaaccactcatctatgctttatatgcagttcttgtacatagtggt
ttcaactgtaacgcaggacactatctctgcttcataaaggccggtaatggactttggtat
cgaatgaatgatgcctcagtagacctttctgatatcaaaacagttctcaatcagcaagct
tatgtacttttttatatcaggcgctatgatttgacactcggagaacgtgctttttactta
ccagcaccgtcttatccccgttcattccttggtcagcggggggctaatagtaagcaggct
ggatttatgggaccacgacttcctcctcatatgattaagaattcaagtcgtttaaatgga
aatggacccgtaaaagaggatccaaataccgttggtgtcaccctaaaaaggccgtcttca
gctccgccaacagcttgtgttcaaaactgggcaattaccaggccttcaattactgatcca
tcaaaaaaccagaagatcactatcagtattcataacaaattgcctgcacgtcagaccgtg
tcgcaacctgactgtcttagcagtgctgcggaggatgaggatctaagcaagcctgtccct
tcatccacaattacaaattcttctgcagcagagtctacctcaaatgcatctacaatgtca
gttgctactaatgtttccaaacaggaagttcccgatgaaatttttgttgagccagcagtg
aatggaaatcctaagctcagctctgataacgcagtcccttacggtgcagaatcttcagga
aaatctgaggagtcgaagggcttgtttaaaaggaattgcaacataatatcttctaacgga
attttgattggaaaggtggtccgtacattgcagaattcccattcttcctgtcagaatgct
gaagaagaaagatcccagcatgagctgccaaaaaatgattcactaaatggtgctattagt
ttagataacgaatctaaagaaaatggactgaaacttgatgattccacttgccaagtccaa
cctgttaaaccttctgagattttcttttctaaaacaaatggactgcttgaaacaatgcct
ctagctttgtcaccggttcctcaagaaataatcttagaatctctcacatacagccagtta
aacagcttgtcagaggaaataagtgtccccggacctcagaaatcttctgagaatgatgct
cttatggaaactgtagtgatggaagccctgtttgcctatgaagaatccaggaaggttcct
tccaactttagctgtgaggttgagaatctttttactcaatcagattctgaaaccatttca
accaaagaagaagttgctgaaagtattataacaaaagctgataatgcacatcccaatatc
aatggtcagcacaaggtcaggaaaaaatccttggatgctgaagatgaattccttgggcag
cgtgagtctgaagacagtagagacaaagacaaaccaagaagatcaaaagaacctgaactc
atttcaaaagaaaatcctttgtacatcaaagtgtctcctgagagtgaagaggaattaggg
caaacttcctctataaagtctgacattgaatgtagttctaaaaagcttgcatctctagat
attacggataaatgccaagatgcaaaggacatttctaataactatgtagaggtaccacct
gttaatgactcttctattacgaagctggataaagttttggagagtcagttttctagggaa
aacgagggactgagtaataaaaaatgtgaagaagataaacataggaaaaaatataagaaa
aaaatatatgactctaaaaaaactgacaaagagcactaccgaaagaagagagaaaactca
gacactgaagagagggagaaggagaagcaaaccagaagcaaaccagatgatcattcccac
aagaggaggtgctctcgcagtgtggaaacaaataagcaaaatcgtcataagcaggaatat
tgcagtgaaagcaagtacagatcttcccataatgaaagaaacagtccaaataatggcaag
agctcaggaaaatattctcgttacagatcccgaagcagagaaagaacagaacaagacagg
aataggtattatcattccaaaggagacagaacttggagcagagaaagatactatcaagat
gaaccacggagatgggaaaaatgcagatactacaatgattattattcctctcacggaaca
agagatgggagagagagaaagtcctctcattgcgataaagactttgacaaatcaagtcag
gcttacaacagcaggtcacataaggattatcactgcaaaagcaggtggcctcacaacgca
ctctctagagaggaagatgtacatcactttagcagccacagagcaaacttgcatcattgt
tcagtacctcagcagcaatctgaaaaatactctcgtgaaaggcatgcactaccacctgtg
tcagctcattcaaattttgaggactcttcccgggaaaatgaaaaactaagaaatggcaaa
agaaaatacacccacgcagaaggaagcggaagcgaaatagaaaagaaatgccgaaagata
ggtgaccaaagactgaaaaaatataagaaggtcaagaagaaaaagaagtccaaagataaa
catcgagagaaggattacaaactttatgatttggatttctctgtgctccgctttgacaat
gacaatcgcaaacgtaagaaaaagaagaaaaagaagaaacacatcaggaaactgaaaggc
ttcttggaatatttagatcctcgtttccagaagaaaacacgggagaagaaggaagaatcc
tgtcctccaggcggctatttaagtgagcaatacagaaaccagggcagtaaacaaccctac
aaggaagggaagccttctggtgcaggtgaaagcaagaaatacagctccatcacatccaat
gagtatgttaaagatgcggagcttactgatggaagccttcaatactcaaactaa
DBGET
integrated database retrieval system
