Nipponia nippon (crested ibis): 104015123
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Entry
104015123 CDS
T05756
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03440
Homologous recombination
nni03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104015123 (TOP3A)
03460 Fanconi anemia pathway
104015123 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nni03032
]
104015123 (TOP3A)
03400 DNA repair and recombination proteins [BR:
nni03400
]
104015123 (TOP3A)
Enzymes [BR:
nni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
104015123 (TOP3A)
DNA replication proteins [BR:
nni03032
]
Eukaryotic type
DNA Topoisomerases
104015123 (TOP3A)
DNA repair and recombination proteins [BR:
nni03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
104015123 (TOP3A)
FA (Fanconi anemia) pathway
104015123 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
104015123
NCBI-ProteinID:
XP_009466099
LinkDB
All DBs
Position
Unknown
AA seq
1019 aa
AA seq
DB search
MNFPARLFAGCGVRMLPQPWRLFSRAAEDVAWQRIRKVLCVAEKNDAARGIADLLSHSRM
RRREGFSKFNKIYEYDYQMFGQNVTMVMTSVSGHLLAHDFKLPFRKWHSCNPLALFDAEI
EKYCPENYMDIKRTLEREVQQCQALVIWTDCDREGENIGFEIIHVCKAVKPNLQVFRARF
SEITLHAVRTACENLTQPDQKTSDAVDVRQELDLRIGAAFTRFQTLRLRKIFPDILADQL
ISYGSCQFPTLGFVVERFKAIQAFVPEAFYKIKVTHDHEDGSVVFNWKRNRLFNHTACLV
LYQMCMEDPVATVVEVGSKPKSKWRPLPLDTVELEKLASRKLKINAKETMRIAEKLYTQG
FISYPRTETNIFPKELNLSALVQQQTQDPNWGAFAQRILDQGGPTPRSGTKSDQAHPPIH
PTKYTANLQGNEQRLYEFIVRHFLACCSQDAKGQETTVEIDIANERFVAQGLMILARNYL
EVYPYEKWSDKVIPLYQKGSRFQPTTVEMVDGETSPPLLLTEADLIALMEKHGIGTDATH
AEHIETIKTRMYVGLTADQRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEG
KKDKSAVLQQQVQKYKQVFIEAVARANKLDEALAQYFGEATEIAEQEEVYPAMPVSIRKC
PQCNNDMVLKTKKNGGFYLSCTGYPACKTAVWFPDFVLDVARDESVCDVCEPHPVHRLKF
KFKRGSVPPMMPLEFVGCIGGCDEMLKELLDLKYLHRSSQSASSASQQANHLQVNNSFNR
ARGENRHVRGTTNLAPGHLLSLNSTRTPRPAPSAAPDDGNNAVVCNCGNEALLLTVRKEG
PNQGRQFYKCSASTCNFFLWADQQSEDRSNVAPRGSALPQPFAGRGPAGFQRPGGGRGPE
LFGSNSSDSGGGTVCKCDQPAVTRTVQKDGPNKGRQFHTCSKPREQQCGFFQWADENVAP
GPSGDVSLNHFGSSGYSRGLGSKAKRPSSLSSGATAKKARTCSICHQPGHTRKTCPQNH
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgaactttccagcgaggctctttgccggctgcggggtcaggatgctgccgcagccctgg
cgtctcttctcgcgggctgcggaggatgtggcatggcagaggatccggaaggtcctgtgc
gtggctgagaagaacgatgctgcccgagggattgcagatctgctctcccacagcaggatg
cgacggcgagaagggttttccaagttcaacaagatctatgaatacgactaccagatgttt
ggccagaatgttactatggtgatgacgtccgtgtcaggacacttactggctcatgatttt
aagctgccgtttcgcaaatggcatagctgcaaccctctagctctttttgatgctgaaatt
gagaagtattgccctgaaaattacatggatatcaagagaacccttgaacgagaagtccag
cagtgccaagctctggtgatctggactgactgcgatcgagaaggggagaacattggcttt
gagataattcacgtctgcaaagctgtaaagccaaacctccaggttttccgagcccgtttt
tcagagattacgcttcatgctgtcagaacagcctgcgagaacctcacccaaccagatcaa
aaaacgagtgatgctgttgatgtcaggcaggagctggacctcaggataggtgctgccttc
accagattccagacactgaggctccggaagatcttccctgacattttagcagatcagctg
atcagctatggtagctgccagttcccaacgctggggtttgtagtcgaacgctttaaagcc
atccaggcctttgttcctgaagccttctataaaataaaagtgacacatgatcatgaagat
ggcagtgtggtcttcaactggaagaggaaccggctctttaatcacacagcgtgcctggtc
ctttaccagatgtgtatggaggatccagtagcaactgttgttgaggttgggagcaagcca
aagagcaaatggaggcccctgcccctggacactgtggaacttgagaagttggcttcccgc
aaactgaaaataaacgcaaaggaaaccatgagaatagcagaaaaactctatactcaaggg
ttcattagctacccccgaactgagaccaacattttccccaaggagctgaacctctctgcc
ttagtacaacagcaaacacaggacccaaactggggagcatttgcacagaggattttggat
cagggtgggccgacccctcggagtggaaccaaatcagatcaggctcaccctcccattcac
cccacaaaatacactgctaacctgcagggcaatgagcagagactatatgaattcatcgtg
cgccattttttggcttgctgctctcaagatgccaagggacaggaaacaactgtggagatc
gacattgctaatgagcgatttgttgctcaaggactaatgatcctggcccgaaattatctg
gaagtctatccttatgagaagtggagtgataaggttatcccactgtatcagaaagggtct
cgctttcagcccactacagtggagatggtggatggggaaaccagccctccattgctcctc
acagaagcggatctcattgctctcatggagaaacatggcattgggactgacgccactcat
gccgagcacattgagacgattaagacgcggatgtacgtgggccttacagcagatcagcgg
ttcctcccagggcacctgggcatggggctggttgaaggctatgattccatgggctacgag
atgtccaagcctgaccttcgagctgagctggaggctgatctgaaactgatctgtgagggc
aagaaagacaaatctgcagtgttgcagcagcaggtccaaaagtacaagcaagtcttcatt
gaagctgtggccagagccaacaagctggacgaggccctggctcagtattttggagaagcc
acagaaattgcagagcaagaggaggtctacccagcaatgcctgtttccattcggaagtgt
ccacagtgcaacaatgacatggtcctgaagaccaagaagaatggcgggttctatctcagc
tgcacgggctatccagcttgtaaaactgcagtctggtttcccgatttcgtgctggacgtg
gccagggacgagagtgtctgtgacgtgtgtgaaccgcatccagttcacagactgaagttt
aaattcaagagaggcagcgttccacccatgatgcccctggagtttgttggttgcatcgga
ggctgtgatgagatgctaaaagagctcttggacctgaagtatttacacaggtcatcccaa
tccgcgtcgtcagccagccagcaagctaatcacttgcaagtcaacaactcctttaacaga
gctcgtggtgaaaacaggcacgtgagggggaccacaaacctggcaccaggacatctgctc
tccttgaactcaacgagaacacccaggcctgctccttcagctgctccagatgacgggaac
aacgcagtggtgtgcaactgtgggaacgaagccctgctgttaactgtgcgcaaagaaggg
cccaatcaaggcaggcagttttacaaatgcagcgccagtacctgcaacttttttctctgg
gctgatcagcagtcagaggacagaagcaatgtggctccacggggctctgcgcttccccag
ccctttgcaggaaggggcccagcaggatttcagcgcccaggaggagggagaggcccagag
ctctttggaagcaatagctctgattcaggaggtggcacagtctgcaagtgcgaccagcca
gccgtcacacgcaccgtccaaaaggatgggcccaacaaagggcggcagttccacacctgc
tctaaaccccgagagcagcagtgcggcttcttccagtgggcagatgaaaacgtggcacca
gggccttctggagatgtctctttgaaccactttgggagcagtggatactcaagagggttg
ggaagtaaagccaagagaccaagcagtctctcttcaggagccactgccaagaaagcacgg
acctgtagcatttgccaccagcctggccacactaggaaaacctgccctcaaaaccactga
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