Nipponia nippon (crested ibis): 104015227
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Entry
104015227 CDS
T05756
Symbol
POLR3A
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03020
RNA polymerase
nni04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104015227 (POLR3A)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
104015227 (POLR3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nni03021
]
104015227 (POLR3A)
Enzymes [BR:
nni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104015227 (POLR3A)
Transcription machinery [BR:
nni03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
104015227 (POLR3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
104015227
NCBI-ProteinID:
XP_009466210
LinkDB
All DBs
Position
Unknown
AA seq
1369 aa
AA seq
DB search
MKSPEEMRQQAHIQVVSKNLYSQDNHHSPLQYGVLDHRMGTSEKDRPCETCGKNLADCLG
HYGYIDLELPCFHVGYFKAVIGILQMICKTCCRIMLSVEEKKQFLDYLKRPGLTYLQKRG
LKKKVSEKCRKKNTCPYCGAFNGTVKKCGLLKIIHEKYKTNKKVVDPIVSTFLQSFETAI
EHNKEVEPLLGRAQENLNPLVVLNLFKRIPAEDIPLLLMNPEAGKPSDLILTRLLVPPLC
IRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISGAKTQMIMEDWDFLQLQCALYI
NSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGRTVISPDPNLRIDEVA
VPIHVAKILTFPEKVNKANINFMRKLVRNGPDVHPGANFIQQRHTQMKRFLKYGNREKMA
QELKFGDIVERHLIDGDIVLFNRQPSLHKLSIMAHIARVKPHRTFRFNECVCTPYNADFD
GDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIAAIQDFLTGAYLLTLKDTFFDR
AKACQIIASILVGKDEKIKVRLPPPAILKPVTLWTGKQVFSLILKPSDDCPVKANLRTKG
KQYCGKGEDLCYNDSYVTIQNSELMSGSMDKGTLGSGSKNNIFYILLRDWGQVEAADAMS
RLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLNAGYKKCDEYIEALNTGKLQQQPG
CTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLIMALCGSKGSFINISQMIACVGQ
QAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYSGLTPTEFFFHTMAGREGLVDT
AVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQFIYGGDGLDPAAMEGKDEPLEF
KRVLDNIRAVYPCRSEPALSKNELVLTAESIMKKNEFLCCRDSFLQEIKKFIKGVSEKIK
KTRDKYGINDNGTTEPRVLYQLDRITPTQLEKFLETCRDKYMRAQMEPGSAVGALCAQSI
GEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKAISTPIITAQLDKDDDPDFARLV
KGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLLRLEVNAETVRYSICISKLRVK
PGDVAVHGEAVVCVTPRENSKSSMYYVLQSLKEELPKVVVQGIPEVSRAVIHIDEQSGKE
KYKLLVEGDNLRAVMATHGVKGTKTSSNNTYEVEKTLGIEAARTTIINEIQYTMVNHGMS
IDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLASFEKTADHLFDAAYFGQKDSVC
GVSECIIMGIPMNIGTGLFKLLHKADKESTPPRRPLIFDNNEFHIPIVT
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctccagaagagatgcgtcagcaagctcacattcaagtggttagcaaaaacttg
tatagtcaggacaaccatcactctccgctgcagtatggagtacttgaccatcgcatggga
accagtgaaaaagaccgtccctgtgaaacctgtggaaaaaatctagctgattgtttagga
cattatgggtacattgacttagaactgccctgttttcatgttggatacttcaaagctgtg
ataggcatcttacagatgatctgcaaaacctgttgccgtatcatgctgtcggtggaagaa
aaaaagcaatttttggattacctgaagcgacctggccttacatatcttcagaagagaggg
ctaaaaaagaaagtgtctgaaaagtgccgaaagaaaaacacttgtccttactgtggtgcc
tttaatggaactgtgaagaagtgtggtttgttgaaaataatacatgaaaagtacaagacc
aataagaaagtggtagatccaatagtgtctacttttctgcagtcctttgaaactgccata
gaacataacaaagaagtagaacccttactgggaagagctcaggaaaacttaaatccttta
gtagtgttgaacctcttcaaaagaatcccagcggaagatatccctctgcttctaatgaac
ccagaagcaggtaaaccttcagacttgatccttacgcgactcttagtgcctccactgtgt
atcagaccctctgtagtgagtgacttgaagtctggcaccaatgaagatgacttaacaatg
aaactgacagagataattttcctcaacgatgtaataaaaaagcataggatatcaggagca
aaaacacagatgattatggaagactgggactttcttcagctgcagtgtgccttgtacatt
aacagtgagctctcggggattcctctcaacatggcacctaagaaatggaccagaggtttt
gttcagagacttaagggaaagcaaggtcgatttagaggcaatctgtctggaaagcgagtg
gatttctctggcagaacagtcatttcacctgatcctaacttaagaatagatgaagtggca
gtgcctattcatgttgctaaaatactaacttttcctgaaaaggtgaacaaagcgaatatt
aattttatgaggaaacttgtccgtaatggtcctgatgttcatcctggagccaacttcata
cagcaaaggcacacacagatgaaaaggtttttgaaatacggaaaccgagaaaagatggcc
caggagctgaagtttggtgatattgtggagcgacatcttatagatggtgacatagtcctg
tttaatcgccaaccctctcttcataagctgagcatcatggctcacattgctagagtaaaa
cctcatagaacattcagatttaatgaatgtgtctgtacaccatacaatgcagactttgat
ggagatgagatgaaccttcaccttcctcagacagaagaagcaaaagcagaagcacttgtt
ttaatggggactaaagcaaacttggttacaccaagaaacggagaacctctcattgctgct
attcaggatttcctcacaggtgcctatcttcttacgttaaaagataccttttttgatcga
gccaaagcctgccaaattattgcttctatcctggttggcaaggatgaaaagattaaagtt
cgtcttccacctccagcaattctgaagcctgtaacactctggacaggaaaacaggttttc
agcctcattctcaaacccagtgatgattgtcctgtaaaagccaatctacgaaccaagggc
aaacagtattgtggcaaaggggaagacctgtgttacaatgattcttatgtcacaattcaa
aacagtgagttaatgagtggcagtatggacaaaggaaccttaggttcaggatccaagaac
aacatcttctacatcttgctgagagactggggacaggtagaagctgcagatgccatgtcg
cgactagccagacttgctcctgtctatctttctaatcgtggcttttcaattggaattggt
gatgtaacccctgggcagggcctgctaaaagctaagtacgagctcctgaatgctggctat
aagaaatgtgatgagtatattgaagctctgaacactggcaagctacagcagcagcctggt
tgtactgcagaagagacactagaggccttaatcctgaaagaactctctgttatcagagat
cacgctggcagtgcctgtctcagagaactggacaagagcaacagtccccttatcatggct
ctctgtggttctaaaggctccttcattaatatatcccagatgattgcttgtgtaggtcag
caggctatcagtgggtcccgagttcctgatgggtttgagaacagatccttgcctcacttt
gagaagcattctaagctcccagcagcaaaaggctttgttgctaacagcttctattctggg
ttgactcctactgaatttttttttcatacaatggctggtcgagaaggtctggttgacaca
gctgtaaaaacagctgaaacaggatatatgcagaggcggctggtaaaatcacttgaagat
ctttgctcacagtatgatttaacagtcagaagttctactggtgacattatacagtttatt
tatgggggagatggcttggatcctgcagccatggaagggaaggatgaaccactggaattc
aagcgagttctagacaatatcagggctgtatatccatgccgaagtgaaccagcccttagt
aaaaatgaattggtgttaacagctgagtccatcatgaagaagaacgaatttctttgctgc
cgagacagttttctgcaggaaattaaaaaattcatcaaaggtgtttctgagaagattaaa
aaaactagggacaagtatggcattaatgacaatggcacaacagagccacgagttttgtat
cagttggataggattactccaacacaattagagaagtttctagagacttgtagggacaaa
tacatgagggcacagatggagcctggttctgcagtaggagctctttgtgcacagagtatt
ggtgagcctggcacacagatgactctgaagactttccattttgctggcgttgcttcaatg
aacattactttgggagtgccaagaatcaaagaaatcattaatgcttcaaaggctattagc
acccctattataacagcacagttggacaaagatgatgatcctgattttgcccgtctggtt
aaaggaagaattgagaaaactttactaggagagatttcagaatatattgaggaagtgttt
cttccagatgattgtttcatcctagtgaagctgtctttagagcgcattagactactgaga
ttagaggtgaatgcagagactgtgcgctactctatttgcatatctaaactcagagtaaag
cctggggacgttgctgtccatggagaagcagttgtatgtgtgacgcctcgtgaaaatagc
aagagttcaatgtattatgtattgcagtccctgaaggaagaactaccaaaggttgtggtg
caaggtataccagaggtttcccgagctgtcattcacattgatgaacaaagtggaaaggaa
aaatataaacttctagttgaaggtgataatctgcgagctgttatggctactcatggagtg
aaaggaacaaaaacgtcctctaacaacacttacgaggtagagaagacactaggaattgaa
gctgctcggacgaccattatcaatgagattcagtatacaatggtgaaccatggtatgagc
attgacaggagacatgttatgttgctgtctgatctaatgacttataagggtgaagtgctg
ggcattactaggtttggactggcaaaaatgaaggaaagtgtgttgatgctggcttccttt
gaaaagactgcagaccatctctttgatgctgcctactttggacagaaggattctgtttgt
ggtgtttctgagtgcatcatcatgggaattccaatgaatattggaacgggactttttaaa
ctgttgcacaaagcagacaaagaatcaacccctccaaggaggcctctgatatttgataat
aatgaatttcatattcccattgttacatag
DBGET
integrated database retrieval system
