Nipponia nippon (crested ibis): 104015238
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Entry
104015238 CDS
T05756
Symbol
KCNMA1
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
104015238 (KCNMA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nni04040
]
104015238 (KCNMA1)
Ion channels [BR:
nni04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
104015238 (KCNMA1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
SR-25
Motif
Other DBs
NCBI-GeneID:
104015238
NCBI-ProteinID:
XP_009466221
LinkDB
All DBs
Position
Unknown
AA seq
1247 aa
AA seq
DB search
MSNNINANNLNTDSSSSPVNVPKMDALIIPVTMEVPCDSRGQRMWWAFLASSMVTFFGGL
FIILLWRTLKYLWTVCCHCGVKNKEAQKINGGGDTQADGACKPTDEKEENVAAEVGWMTS
VKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSNPIESCQNFYKDFTLQIDMAF
NVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQ
FSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENFQNNQPLTYWE
CVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSY
SAVSGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFT
QVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRI
ITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQSCLAPGLSTMLANLFSMRSF
IKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPAVCELVFAKLKLLMIAIEYKSEKRE
SSILINPGNHVKIQEGTLGFFIASDAKEVKRAFFYCKACHDDITDPKRIKKCGCKRPKMS
IYKRMKLACCFDCGRSERDCSCMSGSVHSNMDTLERAFPLSSVSVNDCSTSLRAFEDEQP
STLSPKKKQRNGGMRNSPNSSPKLMRHDPLLIPGNEQIDNMDANVKKYDSTGMFHWCPAK
DIEKVILTRSEAAMTVLSGHVVVCIFGDVKSALIGLRNLVMPLRASNFHYHELKHIVFVG
SLEYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDASLQDK
ECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDNSPVHGLLRQPSITTGANIPI
ITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIR
TLVTGGATPELEALIAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGD
LFCKALKTYNMLCFGIYRLRDAHLSTPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHN
AGQSRASLSHSSHSSYSSSKKSSSVHSIPSTANRPNRTKTRDSREKQNATRMNRMGQEKK
WFTDEPDNAYPRNIQIKPMSTHMANQINQYKSTSSLIPPIREVEDEC
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacaatatcaacgccaacaatctcaacacagactcgtcctcctcccccgtcaat
gtgcccaagatggatgcgctcatcatcccggtgaccatggaggtgccctgcgatagccgc
ggacagcgcatgtggtgggctttcctcgcctcatccatggtcactttctttgggggactg
tttatcatcctgctctggaggaccctcaagtacctgtggactgtctgctgccactgcggg
gtcaaaaacaaggaggcccagaagatcaatggtggtggagatacacaggcagatggggcc
tgcaaaccaacagatgaaaaagaggagaatgtggcagcagaagtgggatggatgacctcc
gtgaaggactgggcaggagtcatgatatctgcccagacactaactggcagagtacttgtt
gtcttagtcttcgctcttagcattggtgctcttgtaatatacttcatagattcgtcaaac
ccaatagaatcctgccagaatttctacaaagatttcacattacagatcgacatggctttc
aatgtgttcttcctactctacttcggcttgcgtttcatagcagccaatgacaagctatgg
ttttggctagaagttaactcagtagtagatttcttcacggtccctccagtgtttgtgtca
gtatatttaaacagaagttggcttggtttaagatttttaagagcccttagactgatacag
ttttcagaaatcttgcagtttctgaatatccttaaaacaagtaattccatcaagctagtg
aatctgtgctctatatttatcagcacgtggctgacagcagctgggttcatacatttggtg
gagaactcaggggatccatgggaaaatttccaaaataatcaaccgctaacatattgggaa
tgtgtttatttactgatggttacaatgtccactgttggctatggagatgtttatgcaaaa
acaacccttggtcgccttttcatggtcttcttcatccttgggggattggccatgtttgcc
agctacgtccctgaaatcatagagttaataggaaaccgcaagaaatatggtggttcctat
agtgcggttagtggaagaaagcacatagttgtctgtggtcacataacacttgaaagtgtg
tccaacttcctgaaggacttcctgcacaaggatagggatgatgtcaacgtagaaatcgtc
tttctgcataatatctcccctaaccttgagctggaagctctttttaaacgacacttcact
caggtggaattttatcagggttcagtccttaatccccatgacctggcgagagtgaagata
gagtcagcagatgcgtgcctaatccttgccaataaatactgcgctgacccagatgctgaa
gatgcctccaatattatgagagttatttcaataaagaattatcatccgaagatcagaatt
atcactcagatgttgcagtatcacaataaggctcatctgctaaatatcccaagctggaac
tggaaagaaggggatgatgcaatctgtcttgctgagctcaagctgggtttcatagcccag
agctgcctggcaccaggcctgtcaacaatgttagccaacctcttctctatgaggtcattc
ataaagattgaggaggatacgtggcagaaatactacctggaaggagttgcaaatgaaatg
tatacagaatatctgtctagtgcctttgtgggtttgtccttccctgcagtttgtgaactg
gtgtttgcgaaactaaagctcttaatgatagccatagaatacaagtcggaaaaacgagaa
agcagcatattaatcaatcctggaaaccatgtcaagattcaagaaggtactttaggattc
ttcattgcaagtgatgccaaagaagtaaaaagggcatttttttactgcaaggcctgtcat
gatgacatcacggatcccaaaaggataaaaaaatgtggctgcaaacggcccaagatgtcc
atctacaagagaatgaaactggcatgttgttttgattgcggacgctctgagcgtgactgc
tcttgcatgtcaggcagtgtacatagtaacatggacacccttgagagagccttcccactt
tcttctgtctctgttaatgattgctccaccagtttacgtgcctttgaagatgagcagccg
tcgacactatcacccaaaaaaaagcagcgaaacggaggcatgcgaaattcacccaactcc
tcacccaaactgatgaggcatgaccccttgttaattcctggcaacgagcagattgacaat
atggatgccaatgtgaaaaaatatgactctacagggatgtttcattggtgtccagccaag
gacattgaaaaggtcattttgactcgaagtgaagcagcgatgacagttttaagtgggcat
gtagtcgtttgcatatttggggatgttaaatctgctttgattggattaagaaatttagtg
atgccattacgagccagcaactttcactaccacgaactcaagcacattgtgtttgtgggt
tcacttgaatacctgagaagggaatgggagacactgcataacttccccaaggtttcaatc
ttgcctggtacaccattaagtcgggctgatttaagggctgtcaacatcaacctctgcgac
atgtgcgttatcctgtcagccaatcagaataatattgatgatgcttcgctgcaggacaag
gaatgcatcttggcgtcactcaacatcaaatctatgcagtttgatgacagcattggggtc
ttgcaggctaattcccaaggctttacaccccctgggatggataggtcatctccagacaac
agtccagtccatggcctgttacgtcaaccctccattacaacaggagccaacatccctatt
ataacagagctagtaaatgattcaaatgttcagttcttggaccaagatgatgatgatgat
ccagacacagaactgtatctcacgcagccctttgcatgtggaaccgcatttgctgtcagt
gtgctggactctctcatgagcgcaacatacttcaatgacaatatcctcacactgatacgg
acattggtaacaggaggagccacaccagagctggaagcactgattgctgaggaaaatgca
ttgagagggggttacagcacaccccagacacttgcaaacagggacaggtgtcgagttgct
cagttggctttgtatgatgggccgtttgcagacctaggggatggaggttgttatggagat
ctattttgtaaagcactgaaaacatacaatatgctttgctttggaatttatcgattaagg
gatgcacatctaagtactcccagccaatgcactaaacgttatgttatcacaaacccacca
tacgaatttgagcttgtgccgacagacttgatcttctgtttgatgcaatttgaccacaac
gctggccagtcccgggccagtctttctcattcctcccattcctcctattcttccagcaag
aagagctcatccgttcactccatcccatcaacagcaaaccgaccgaaccgcaccaagacc
agggattcccgggaaaaacagaatgcaacaaggatgaatagaatgggccaagaaaagaaa
tggtttacagatgagccggataatgcctatcccagaaacattcaaatcaagcccatgagc
actcacatggccaatcagatcaatcaatataaatcaacaagcagcttgataccaccaatc
agagaagttgaagatgaatgttga
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