Nipponia nippon (crested ibis): 104015578 Help Entry 104015578         CDS       T05756                                  Symbol COL24A1 Name (RefSeq) collagen alpha-1(XXIV) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism nni  Nipponia nippon (crested ibis) Pathway nni04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:nni00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     104015578 (COL24A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:nni00536]     104015578 (COL24A1) Glycosaminoglycan binding proteins [BR:nni00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    104015578 (COL24A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  104015578 NCBI-ProteinID:  XP_009466626 LinkDB All DBs Position Unknown AA seq 2096 aa AA seqDB search MLEYCLRSLDLHLLAELPQRFVRGQTVNAGSDGYLSWLLAWRGSRVPRNSRCVGMGRQGQ HVGSLRLHSISRLPSQASKHGTRESSALDESRIPNKMPNNLALQLRTVQTEGERAGRGAG SKLRAGEAKCKRMRFPVVLGTRSGDACLCPYGLMNRVVHAELEMGTLAWLLLAHAISSQL SEGGFLSPSLLNQRPLKSLLFSKVQKMALSEGTELLLAVRGTCEIFPFPVTQVPDIWSSS TKPVGVFDSYWDFAKRCLHFGLCERLSRLDGFRKLYTAPVVSEGRLLRILGMAYDVPSLE QDVRAFQLLGVALLLQKALLQSPVSALSTRVFTLLRGKSVLQRELNSSMDLLPNIPNSGT VPGNLCGSRSAPTKVKGQWKLCRSKAAGFDHGFAAQRVLQGLVLFNSTLFVLRDSLCKDV LWDNVVIDRVTGTRKTLLFIAICIAVGVAQVPKQAVVTAPDVQLALETAVGILASQSGGA IDVLHQLGLVKDIQQPSETTVPSTSSLLPQGVRLTVSGVVLTGDAHIESPIAQVIPSNLG HQFTILVGLYSYRVNNAFLFSIRNKSRLQFGVQLLPRKVVVYTGGKQSVYFDYSVHNEQW HSFAIDIRDKAVSVFAECGKKYYSREIHSEVETFDLDGLFTLGRMNSHSVSFEGVICQLD IIPSAEASANYCKYVKQQCRQAETYRSLLGAPHVSDGLDVFSKMTTDEKKQSEGVSAYRK EVTSNIPVTNVAQIHFLSEYFESRNVSASEFPEAKPLLLEAWPETELQENVNLPLHQQET SKKKNITKTPAGSYPNTLDNATEDAGRQSEPTLISPVKQSKAKSKGMDKAKQHLNEPSTK QQIINATLYGLPADLSLDNQLSPGQEGAFDADETYHTDNSYDVGIDNYAYDYEDLDKMFE MGSVRGPKGETGPPGPPGPPGLPGPSGKRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSP GQAKRGEKGDPGPIGFPGPPGIKGQKGLKGYLGLQGPRGEQGIPGMAGNIGAVGYPGRQG LAGPEGNPGPKGVRGFIGPPGVAGQPGPEGERGIPGFRGKRGPKGRQGFPGDFGNRGPPG PDGNPGIVGGVGPPGFPGLRGDIGPAGPSGPSGIPGPTGLPGSAGQPGMKGDKGEHGLAG EPGDQGYPGDKGALGLPGPPGIRGKPGPPGKIGDPGSHGPMGPPGPEGFPGDIGVPGLNG PEGPKGLLGDRGPPGPQGPKGVEGEVGPPGPTGGVGPRGKPGQKGYIGDPGPEGLKGEQG DQGNLGKTGEAGSAGLPGETGPSGSLGEKGERGSPGPVGPPGEKGAMGYPGPPGGPGPVG PEGLPGPSGTRGPPGPQGPKGRRGPRGLDGPLGEPGTQGIKGLLGPPGTTGDRGPMGEPG PRGQPGDAGPIGEMGFEGPPGPEGEPGLQGEPGAKGDVGPAGKAGEPGDQGLRGEPGPPG EDGVQGKDGPKGDPGDQGLLGEVGEKGEMGLPGIAGPPGEPGGPEGTPGNPGQRGRLGKK GEKGQLGPPGEIGPAGDSGQPGETGPKGARGTRGPLGHLGEMGPEGESGIPGYGGHQGPP GPPGPPGLKGEKGYPGEDNTVPGPPGPIGEPGPSGERGDRGEPGDEGYQGHIGLPGLRGP IGQQGPPGEPGELGEQGPKGERGSEGPTGKKGATGQAGKPGIPGKPGPAGQKGAVGYPGP EGNPGXPGKPGLSGKPGPKGTKGNSGLPGLAGYPGARGPKGLPGMPGPMGAPGLKGEKGL LGHPGKRGKRGLPGSQGDQGRAGDAGLKGQTGEDGDQGLMGFQGFPGPKGPAGDIGLVGI LGPKGPTGQVGYIGPVGQEGLTGRTGRPGPRGEKGTRGEMGPQGPQGQPGPPGPPGPPGP RKQVDINAAVQALIESNAALQMEKYQNTEVTLLDHSTEIFKTLHYLSNLLHSIKNPLGTR DNPARICRDLLNCERKVADGKYWIDPNIGCPSDAIEVFCNFTAGGQTCLTPLSVTKLEFG VGKVQMNFLHLLSSEATHSITVHCLNTPMWRLNKVGGQKTSVSFKGWNGQIFKANTLLEP KVLMDECMMEDGSWHKTQFFFHTQDTNQLPVVQVNALPHLKPGQQHFIESGSVCFL NT seq 6291 nt NT seq  +upstreamnt  +downstreamnt atgctggaatactgtctgcggtccctcgatctgcatctcctggccgagctgccgcagagg tttgtcagggggcagacggtgaatgcggggagcgatggctatctgtcctggctccttgct tggagaggcagccgtgtaccccgcaacagccggtgcgtggggatgggaaggcaggggcag cacgtgggcagcctccggctccacagcatatccaggctcccctctcaggcatcaaaacat ggaacacgggaaagctcagctcttgatgaaagcagaataccaaacaagatgccaaacaat ctggctttacagctccgcacagtacaaacggagggggaaagagcaggaagaggcgcaggg tccaagctgcgtgcaggagaagcgaaatgcaaaagaatgaggttcccagtggttcttggg acacggtcaggagatgcatgcctttgtccgtatggattaatgaatcgtgtcgtacatgca gaactggagatgggcacgcttgcctggctgctgctggcacatgcaatttcttcccagtta tcagaaggaggtttcctatccccaagtttgctaaaccaaaggcctttgaaatctcttctg ttctccaaagtgcagaaaatggcattgagtgaaggcacagagttgctgctggctgtcaga ggcacatgtgaaatattcccctttcctgtgacccaagttcctgacatctggagttcttcc acaaaacccgtgggcgtatttgacagttactgggattttgcaaagagatgtctacatttt ggtctgtgtgaacgtctgtctcggctggatggtttcagaaaactttacacagccccagta gtttctgaagggaggcttctccgcattcttggtatggcatacgatgtgccatcactggaa caagacgtcagagcttttcagctgctgggtgtggcattgctcctccagaaggctttgctt cagtcgcccgtttcagctctctccacgagagtttttactctgcttaggggaaaatcagtt ctccaaagggaactcaatagcagcatggatcttctgccaaatattcctaattctgggact gtaccaggaaacttgtgtgggtcccgttctgctcctactaaagtcaaaggtcaatggaag ctttgccgaagtaaggctgcaggatttgaccacgggtttgctgcacagcgtgtattgcaa ggtctggtattgtttaactctaccttgtttgttttgagagacagtttgtgtaaagatgtc ttatgggataatgttgtaatagaccgtgttactgggacaaggaaaactctcctttttatt gcaatatgtatagctgtgggtgttgcacaagtacccaaacaagctgttgtaactgcacca gatgtgcagcttgcactagagaccgctgtgggaatattagcgtcccaaagtggtggagca atagatgttcttcatcaactaggccttgtgaaagacattcaacagccctcagagacgaca gtgccctcaacatcatctctgttacctcagggtgttcgtctaaccgtatcaggagttgta ctaactggtgatgcacatattgagtcccccatcgctcaagtcataccatcaaatctaggg catcagttcaccatattagttgggttgtactcttacagagtaaataacgctttccttttc agtattaggaacaaaagtagactgcagtttggtgtccagttgctaccgagaaaggtagtg gtgtacactggagggaagcagtctgtatactttgattatagtgttcataatgaacaatgg cattcatttgccattgacattagagacaaggctgtctcggtatttgctgagtgcggaaag aagtactatagtagggaaatacattctgaagtggagacatttgatttggatggtttattt accctgggaaggatgaactctcactctgtcagctttgaaggagttatatgtcagctagat attattccctctgcagaagcctctgcaaactattgtaaatacgtgaaacagcagtgtcgc caggctgaaacgtatcgatctctgctaggagctccacatgtgtcagatgggctggatgtt ttttcaaagatgacgactgatgagaaaaaacagtcagagggcgtatcagcttatagaaag gaagtaacgtcaaacattcctgtaaccaatgttgctcagattcactttctatcagaatac tttgagtcaagaaatgtctctgcatcggagtttccagaggccaaacctctgctgctagaa gcttggcctgaaacagaactccaggaaaacgtcaatctgcctcttcatcagcaggagacg agcaaaaagaaaaacatcactaaaacccccgcaggatcatatccaaatactttagataat gccacagaagatgcaggcagacaaagtgagcctactctgatctcccctgtaaaacagagt aaagctaaaagcaagggaatggacaaagcaaaacagcatttaaatgaaccaagcacaaag cagcaaatcatcaacgcaaccctgtacggtttgcctgctgacctctcgctggataatcaa ctcagtccagggcaggaaggtgcatttgatgctgatgagacttaccacacggacaacagt tatgacgttggtatagataattatgcttatgactatgaagatcttgacaaaatgtttgaa atgggcagtgtcagaggtccaaagggggaaactggacctcctggtcctccaggtcctcca ggtttacctggtccatcagggaagagaggtcctcggggtattccaggaccacatggtaat ccaggtttgccaggattgccaggtccaaagggccctaaaggagacccaggattctctcca ggacaggcaaaacgtggtgaaaagggtgatccaggccccataggctttccaggcccacct gggatcaaaggccagaagggtcttaagggttatctgggactgcaagggccacggggtgag cagggaattccaggaatggctggcaatattggggcagttggttaccctggcaggcagggc ttagctggaccagaaggtaacccaggtcctaaaggtgtaagaggtttcattgggcctcca ggtgtggcaggacaaccaggacccgaaggagaaaggggcatcccaggcttccgtggaaaa agaggtcctaaagggagacagggttttccaggtgactttggaaatagaggcccccctggt ccagatgggaatcctggaattgttggtggtgttggtcctcctggatttccaggactaaga ggagacatcgggccagcaggaccaagcggaccatcaggaattccagggcccacgggtctc ccagggagtgcgggacagcctggaatgaaaggtgataagggtgaacatggccttgcagga gagccaggagaccaggggtacccgggagacaagggtgctcttggtttaccaggaccccca gggatcagaggaaagccaggacccccagggaaaattggagatcctggatcgcacggacca atgggtcctccaggacctgagggttttccaggagatattggtgtacctggattaaatggc cctgaaggtcctaagggacttctgggtgatcgagggcctccagggccacaaggccccaaa ggagttgagggagaagtaggaccacctggacctactggaggagtcggcccaagaggaaag ccaggacagaaaggttatataggtgatcctggaccagaaggtttaaagggagaacaagga gatcaaggaaaccttggaaaaactggtgaagcaggatcagctggcttacctggagaaact gggccatctggaagccttggtgaaaagggagagcgaggcagtccaggaccagtaggtcct cctggagagaaaggtgccatgggctacccaggacctccaggaggccctggacctgtgggg ccagaaggattacctggaccttcagggacaagaggaccaccagggccacagggacctaag ggaagaagagggccaagaggtctagacggtcctctaggagaaccaggaacacaaggcatt aagggtttgcttgggcctcctggaaccacaggagacaggggaccaatgggagagccaggt ccaagaggacaaccaggggatgctggccctattggagaaatggggtttgagggacctcct ggccctgaaggagaacctggcctgcagggagaaccaggtgcaaagggagacgttggacct gctgggaaggctggagaaccaggcgaccaaggtttaagaggtgaaccaggacctccagga gaagatggtgttcaaggaaaagatggcccaaagggagaccctggagaccagggacttctt ggagaagttggtgaaaaaggagagatgggcttaccaggaattgctggaccccctggtgaa cctggtggtcctgaaggaacaccaggaaatccaggtcagaggggccgtttaggaaagaag ggggaaaaggggcagcttggccctcctggagaaattggacctgctggtgactctggccaa cctggagaaactggtcccaaaggtgcaagaggaactcgaggtcccttgggacatctagga gaaatgggacctgaaggagagtcaggaattccaggttatgggggtcaccagggtcctcca gggcccccagggcccccaggactcaaaggagaaaagggttacccaggtgaagacaataca gttcctggaccacctgggcccataggtgaaccaggtcctagtggtgaacgtggagataga ggagaacctggtgatgagggctaccagggtcatataggtcttccagggcttagaggacct attggacaacaggggcctccaggagagccaggtgaattgggagagcaaggaccaaaagga gaaagaggttcagaaggacccacagggaagaaaggagcaacgggtcaggcaggcaaacct ggaattcctggaaagccagggccagcaggccagaaaggagcagttgggtaccctggacca gaaggcaatcctggnntccctggcaagcctgggctgtcagggaagcctggccctaagggt actaaaggaaactcaggcttaccaggtctggcaggttatcctggagctcgaggtcccaaa ggattaccaggcatgccagggcccatgggagcacctggactaaagggtgagaaagggctt ctgggtcatccaggaaagcgaggcaaaagaggccttccaggatcacagggtgaccaagga cgagcaggagacgctggactgaaaggacagactggagaagatggagatcaaggtttgatg gggtttcaaggattcccaggtccaaaaggtcctgcaggcgacattggcttagttggaatt ctgggcccaaaaggtccaacaggccaagttggatatattggccctgttggtcaagaaggc ctaacaggccgaactggcaggcctggaccaagaggtgagaagggcacaaggggtgaaatg gggcctcagggacctcagggccagccagggccacctggaccacctggaccaccaggacca agaaaacaagtggacatcaatgctgctgttcaagctttgattgagtcaaatgctgcactg cagatggagaaataccagaatactgaagtaactttactagatcacagtacagagatattc aaaacgctgcactaccttagcaatttactgcacagcatcaagaacccccttggcacacgg gataacccagcacgcatctgcagggatttgcttaactgtgaacggaaagtggcagatgga aaatactggattgacccaaatatcggatgtccttctgatgctattgaagttttctgcaac ttcactgcaggtggtcagacatgtttaacgccgctgtctgtgacaaagctggagttcggc gttggaaaagtgcagatgaacttccttcatttactgagctcagaagcaacccatagcatc acagttcattgtctgaacacaccaatgtggagattaaataaagtaggtggccagaaaacg tctgttagcttcaaaggatggaatggtcaaatatttaaagcaaatacgctacttgaaccg aaggtgcttatggatgaatgcatgatggaagatggcagctggcataagacacagttcttt tttcacactcaggacactaatcagcttccagttgttcaagttaacgcacttcctcatctc aagccaggacagcagcacttcatagaaagtggttcagtgtgcttcctttaa

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