Nipponia nippon (crested ibis): 104015603
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Entry
104015603 CDS
T05756
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nni03016
]
104015603 (TRMT13)
Enzymes [BR:
nni01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
104015603 (TRMT13)
Transfer RNA biogenesis [BR:
nni03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
104015603 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
OrgC
Methyltransf_32
DUF7077
Motif
Other DBs
NCBI-GeneID:
104015603
NCBI-ProteinID:
XP_009466653
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MAAPQPEPGRGSPVPGRCAYFVERKKRFCKMIPAPGRRFCGEHGQQEEENDRKRIPCPLD
PKHTVYEDQLQKHLKKCNSREKPKPVYFVQDINAGLKDVAEIPEKQVPLSSLSREELENL
IIKLKKASNGLELRLKEQILSHQALQEALNDPKNGESAFKHLKQQASILGNMEKLHLLGP
GRCFVEFGAGRGKLSHWVDVALQNVENIQFLLVERATTRFKVDGKHKRRDSIFERLQVDI
QHLCLNKVPILEKKKLPVVGIGKHLCGAATDLALRCLVESYTTCCDGENEEPAPKRSRND
ETEVAPNNCADNESNKDNCKPVAGIVIALCCHHKCDWTHYVGREFFKSVGVGPVEFHYFQ
RMSSWATCGMRETTTKASTSEENEDQTNDTEEHEQTFSKTESGSDTLQGILTVEERKEIG
CLCKLLIDHGRIEYLQQRGYKAALQYYTESAVSLENVLLTAVPSPSLIPEPTT
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgcagccagagccgggccgggggtccccggtgccaggacgatgtgcctac
ttcgtggagaggaagaagcgcttctgcaagatgatcccggctcctgggaggcgcttttgc
ggagagcatgggcagcaggaggaagaaaatgacagaaaaagaattccgtgtcctcttgat
ccaaaacacactgtatatgaagaccaactacaaaaacatttaaaaaaatgtaattcaaga
gagaagccaaagccagtctactttgttcaagatattaatgcaggtttaaaagatgtagca
gaaataccagaaaaacaagtacctctctcttctctatccagagaagaactggagaacttg
ataattaagttgaaaaaagcaagcaatggcctggaacttcgccttaaggaacaaatactg
tcccaccaggctttacaagaagcattaaatgacccaaagaacggggaatctgctttcaaa
cacttgaaacaacaggcttctattttaggtaacatggaaaaattacatttacttggtcca
ggaagatgttttgttgagtttggagctgggcgaggaaagctgtctcattgggttgatgtt
gccttacagaatgttgaaaatattcagtttttgcttgtggaaagagcaactacaagattc
aaggtggatggaaaacataaaaggagagattctatatttgaaaggctccaagttgatatt
caacacttatgtttaaataaggtacctattttggagaagaaaaaactgccagtggtagga
attgggaagcatttgtgtggtgctgcaacagatcttgctttgagatgcttggttgaaagt
tacacaacttgctgtgatggagaaaatgaagagcctgcaccaaaacgctctaggaatgat
gagacagaggtggctcctaacaattgtgctgataatgaaagcaacaaagacaactgtaag
cctgtagctggaattgttattgcactgtgctgccatcacaagtgtgactggacacattat
gtaggcagagagttctttaaatcagtaggagttggaccagtagaatttcattattttcag
agaatgagtagctgggccacttgtggcatgcgagaaaccacaaccaaagcctctacaagc
gaagaaaatgaggatcaaactaacgacacagaagaacatgagcaaacattcagcaagaca
gagagtggttccgatactttacaagggatacttactgttgaagaacgaaaggagataggt
tgcctctgtaaactgctgattgatcatggacggattgaatatttacaacaacgaggatac
aaggctgcactacagtattatacggagtctgctgtatccttggagaatgtcctgttgaca
gctgtcccaagtccatctttgataccagagccaactacatga
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integrated database retrieval system
