KEGG   Nipponia nippon (crested ibis): 104015694
Entry
104015694         CDS       T05756                                 
Symbol
HLTF
Name
(RefSeq) helicase-like transcription factor
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
nni  Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:nni00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nni04121]
    104015694 (HLTF)
   03400 DNA repair and recombination proteins [BR:nni03400]
    104015694 (HLTF)
Enzymes [BR:nni01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104015694 (HLTF)
Ubiquitin system [BR:nni04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    104015694 (HLTF)
DNA repair and recombination proteins [BR:nni03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    104015694 (HLTF)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-RING_2 ResIII DEAD RING_XB3-XBAT31 zf-rbx1 zf-C3HC4_4 zf-ANAPC11 Prok-RING_4 HDA2-3 zf-Nse zf-RING_4 zf-RING_6
Other DBs
NCBI-GeneID: 104015694
NCBI-ProteinID: XP_009466757
LinkDB
Position
Unknown
AA seq 896 aa
MPIIRLGLEDFLPVGDTSGTEEDTDSAILYGTLRGSVVGLRYYTGIVNNNEMVALQREPN
NPYDKNAVKVNNVNGDQVGHIKKELAAALAGIMDNKLALVEGVVPYGAKNAFTMPVQMSF
WGREENKEAVLDQLKRHGFKLAPPLKGPECGFGSKWISGRAGPSYSAPVHAAVQLTTEQL
KSEFDKLFEDLKEDDKTCEMEAAEAVGTLLLPHQKQALAWMVSRENSNDLPPFWEERSDF
YYNILTNFAEKQRPKNVLGGILADDMGLGKTLTAIALILTNYQDGKPLPVEKITSEKFYE
ESGTNSMNSVGRGLSTSCVIQEDTGFASALLPSSTCLKRQKKRKGTASVQSVKKKHSDDG
PRATLIVCPLSVLSNWIDQFEQHIHQDFHVNIYVYYGSDRSKDPSILSEQDVVLTTYNIL
ATDYGARGDSPLHKVTWLRIVLDEGHTIRNPNAQQTKAALNLEGDRRWVLTGTPIQNSVK
DLWSLISFLKLKPFTDREWWHRTIQRPVTMGAPGGLGRLQSLIRSITLRRTKTSKVKGKP
VLELPERKVLIQYVTLTEEERQIYQSVKEEGKAAISRFFSEGTVLAHYADILGVLLRLRQ
LCCHPHLCINTSSSSFSADNITPEELRETLVTKMKLVLSSGSDEECAVCLESLTFPVITR
CAHVFCKPCISEVIRSEQPNAKCPLCRNELRAEHLVECPLEGEVDSSNGKKSDQEWISSA
KINALMHALIELRRDNPTAKCLVVSQFTTFLSLIENPLKESGFVFTRLDGSMAQKKRVEA
IQCFQSSQAGSPTVMLLSLKAGGVGLNLTAASRVFLMDPAWNPAAEDQCFDRCHRLGQKH
NVVITKFIVKDSVEENMLKIQKKKRELAAGAFATKKPSASEVKQTKINEIKALIDL
NT seq 2691 nt   +upstreamnt  +downstreamnt
atgccgattatacgtcttgggttggaagacttcctccctgtaggtgacacttctggaaca
gaggaggatacagactcagctattttatatggaactttgcgaggaagtgttgttgggtta
cgatactacacggggattgttaataacaatgaaatggttgcacttcagagggagcccaat
aatccttacgacaaaaatgcagtgaaagtaaataatgtgaatggagaccaggtaggccat
ataaaaaaagaactagcggcagcattggcaggcattatggacaacaaactagcattagtg
gaaggggttgtcccttatggagcaaaaaatgcctttaccatgcctgtacaaatgagcttt
tgggggagagaagaaaacaaggaagcggtgctagatcagctaaaaaggcatggatttaaa
ttggctcctcctctgaaaggtccagaatgtggttttggatcaaagtggatttctgggaga
gctggtccaagttatagcgctccggttcatgctgctgtgcagttgacaactgaacagctt
aaaagtgaatttgacaaattgtttgaggatctgaaggaagatgataaaacttgtgaaatg
gaagcagcagaggctgttggcacactcttgcttccccatcagaagcaggctttagcttgg
atggtttcacgtgagaacagtaatgatttgccaccattttgggaagaaagaagtgacttc
tattacaatatactcacaaatttcgcagaaaagcagcgacctaaaaatgttcttggagga
atactggctgatgatatgggactgggtaaaacgcttactgctattgcattgattctcaca
aattatcaagatggcaagcctcttcctgttgaaaagatcacaagtgagaagttctatgag
gaatctggtactaacagcatgaacagcgttggacgcggactatcaacttcctgtgttatc
caagaagatacaggctttgcatctgctcttctaccttcatctacttgtttaaaaagacaa
aaaaagagaaaaggtaccgctagcgttcagtcagttaagaagaaacattctgatgatggc
cccagagcaacactgattgtgtgtccactatctgtcctaagcaactggatcgaccagttt
gaacaacatatccaccaagattttcatgtaaatatttatgtttattacggttctgaccgt
agcaaagacccatcaattctttcagaacaagacgtcgtactgacaacatacaacatctta
gcgactgattatggagcgagaggtgacagccctttacacaaagtcacgtggctgagaatt
gtgttggatgaggggcacactatacgaaatccaaatgctcagcaaactaaagctgcctta
aatctggagggagacagaagatgggtacttacaggcactcctattcagaattctgtaaag
gatttgtggtctcttatttccttcttaaaactgaaaccttttactgatcgagagtggtgg
cacagaacaattcagcgtccagtcacgatgggagctccaggaggacttgggcgtttacag
tctctgattaggagtattacccttagaagaacgaaaacaagtaaagttaaaggaaaaccc
gttttggagttaccggaacgtaaagtacttattcagtatgttacgcttacagaggaagag
agacaaatctatcagtctgtgaaggaggagggcaaagctgctattagcagatttttcagt
gaagggacggtactagctcactatgctgacatccttggtgtcctgctcagattgaggcag
ctttgttgtcatcctcatctttgtataaatacatcttcttctagtttttcagctgataat
ataactcctgaagagctgcgtgagacattagtgactaaaatgaagttggttctgagctct
ggttcagatgaagaatgcgcagtttgcttggaatcactgacttttcctgtgataacgcgc
tgtgcgcatgtgttttgtaagccatgtatttctgaagtcatcagaagtgaacagccaaat
gccaaatgccctctctgtaggaatgagcttcgagcagagcacttggtggagtgtccccta
gaaggggaagtagactccagtaatggaaagaagtctgatcaggagtggatatccagtgca
aagataaatgctctcatgcatgctttgatagaactacggagggataatccaactgctaag
tgtctcgtcgtttctcagttcacaactttcctgtcactgatagaaaatcccttgaaagaa
tcagggtttgtctttactcgtttggatgggtcaatggcacagaagaaaagagtagaagca
attcagtgtttccaaagcagccaagcaggatccccaactgtaatgcttttgtctctgaaa
gcaggtggagttggattaaatctgacagcagcttcccgagtgtttttaatggatcctgct
tggaaccccgccgcagaagaccagtgttttgacaggtgtcacaggctgggtcagaagcat
aatgttgttattactaagttcattgtgaaggattcagtggaagaaaacatgctgaaaatt
cagaaaaagaagagggaacttgcagcaggagcctttgctaccaaaaagccttcagcaagt
gaagtaaaacaaaccaaaattaatgaaattaaggctctaattgacttatag

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