Nipponia nippon (crested ibis): 104015809
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Entry
104015809 CDS
T05756
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104015809 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nni03021
]
104015809 (POLR1B)
Enzymes [BR:
nni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104015809 (POLR1B)
Transcription machinery [BR:
nni03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
104015809 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
PBP_GOBP
Motif
Other DBs
NCBI-GeneID:
104015809
NCBI-ProteinID:
XP_009466875
LinkDB
All DBs
Position
Unknown
AA seq
1011 aa
AA seq
DB search
MPQGTIKQPLGYIPIMVKSKLCNLYNLSPQELIEHHEEEEEMGGYFIINGLEKVIRMLIM
PRRNFPLAMTRHKWKNRGPGFTEYGVVMHCVKDEHTAINMNLHYLENGCVMVNFIFQKEL
FFLPLGFALKALVNFPDYQIFEELIKEKEGDTFYVNCVTEMMRAVVDAGCFTQQNVLEYL
GKSFRIKLNLPEWYSNEQAADFILNKCICVHLTNRTEKFYLLCMMTRKLYAFAKGECMED
NPDSLMNQEVLTPGQLFLMFLKERLESWLLSVKFVLDKRAEKADISINADSLVKAFSLAT
DFTKPFEYLLATGNLRSKTGLGMLQDSGLCVVGDKLNFIRYLSHFRCIHRGAAFSQMRTT
TVRKLLPESWGFLCPVDTPDGEPCGLMNHMTAVCEIVTEMVPVTDIPPLLCSLGVTPIDA
TPSKPYAECYRVVLDGSVVGWVEWELAPEIAETLRRFKITQEKRFPARAEVVLIPMTGKP
SLYPGLFIFTTPCRMVRPVRNLFYGRNEWIGTLEQIFMNVASLESEVVPGTTTHQELFPH
SILSVVANLIPFSDHNQSPRNMYQCQMGKQTMGFPVYNYKDRSDNKLYHLHTPQSPLVRP
SMYDYYGMDSYPVGTNSIVAVISYSGYDMEDAMIVNKSSWQRGFAYGSVIKMESIDLALK
ASRAGDNLVFGVRPGDPNLTEKLDADGLPFVGSILQPGDPFYSFVNLSTGETFTVYYPNK
EVGIVDNVRLCSNDRGTGKFKKACITVRVPRNPTVGDKFASRHGQKGILSQLWPVEDMPF
TENGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGVSYDATPFTFTEKNAALKYFGE
TLVSAGYNFFGTEKMYSGISGLELEAEIFVGVVYYQRLRHMVSDKFQVRTTGPRDAVTNQ
PIKGRNLEGGIRFGEMERDALLAHGTSFLLQDRLFNCSDGSVAYVCMSCGSMTSPVLEKP
PHSSSVTSNRRYSCSVCSEVDTIEVVPVPHVFRYFVAELAAMNIKTKLNVE
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgccacaagggaccattaaacagcccctggggtatattccaatcatggtgaagtccaag
ctgtgcaacctctataatctttctccacaagagctcatagagcaccatgaggaggaagag
gaaatgggaggctactttataattaatggcttagaaaaagttattaggatgctgattatg
cccaggcgaaatttccctcttgcaatgacgagacacaaatggaaaaacagaggccctggc
ttcacagagtatggagtagtgatgcactgcgttaaggatgagcacacggcaataaatatg
aaccttcactacttggaaaatggttgtgtcatggtgaatttcatttttcagaaagagttg
ttcttccttcccttgggatttgctctgaaggcattagttaatttcccagactaccagatt
tttgaagagctgatcaaagaaaaggaaggtgacaccttttatgtgaactgcgttactgag
atgatgagagcggtagtggatgcaggctgtttcacacagcaaaacgttctcgaatacctg
ggaaagagcttcagaataaaacttaaccttcctgagtggtacagcaatgaacaggctgca
gatttcattttgaacaagtgtatctgcgtacacctgacaaacagaactgaaaagttctac
ctgctctgtatgatgacccggaagctgtatgcttttgccaaaggggagtgcatggaggat
aatccagacagtctgatgaatcaagaagtgcttaccccgggacagcttttccttatgttc
ttaaaggagaggcttgaaagctggttgctatctgttaagttcgttttggacaaaagagca
gaaaaggcagatatcagcataaatgcagacagcttggtgaaggcattcagcctggcaaca
gactttacaaagccatttgaatatcttcttgcaactggtaacctgcgatctaaaaccggc
ctgggcatgttacaggacagcggtctgtgtgtggtgggagacaagctgaatttcattcgc
tacctttcccacttccgctgcatacacagaggggcagcattttcccagatgagaaccaca
accgtccgcaagctgctgcccgaatcctggggtttcctgtgccctgtggacaccccagat
ggagaaccctgtggtctgatgaaccacatgacagctgtgtgtgaaatagtgacggagatg
gtgcctgtgacagacattccacctttgttatgttccctaggtgtcacccccattgatgcg
actccaagcaagccttacgcggagtgttacagagttgtgttggacggctctgtggtaggc
tgggtagagtgggagctggctcctgagattgcagaaaccctccgccgtttcaagataaca
caagagaagagatttcctgcacgggcagaagtggtccttatcccaatgacgggaaaaccc
agtctgtatcctgggttgttcatttttactaccccttgccggatggtgcggcctgtcaga
aacctgttctatggaaggaatgaatggattggtactctggaacagatcttcatgaacgtg
gcctcgctggagtcggaggtggtgcccggaacgaccactcaccaggagctcttccctcac
agcattctgagcgtggtggccaatctcatccccttctccgaccacaaccaaagtccacga
aacatgtaccagtgccagatgggaaagcaaaccatggggtttccagtttataactacaag
gaccgctcggataacaagctgtaccaccttcacactccccagagccctctggtgcggccc
agcatgtatgactattatggtatggacagctatcccgtcggcacgaattcaattgtggct
gtcatctcctacagtggctatgacatggaagatgcaatgattgtgaacaaatcttcctgg
cagagagggtttgcctatggaagtgttatcaagatggagagcattgaccttgcccttaaa
gccagcagggcaggcgataatttagtatttggcgtcaggcctggtgatccgaaccttaca
gagaagttggatgccgacggactgccttttgttggctctatcctacagcctggggacccc
ttctacagcttcgtgaacctcagcacaggggagaccttcacggtgtactatccgaataag
gaagtcggcattgtagacaacgtcaggttatgcagtaatgaccgtggcaccgggaaattc
aagaaggcttgcatcactgtgagggttccccgaaatccaactgtcggagacaaatttgcc
agccgtcacggacagaaaggtatcctgagccagctctggccagtcgaggatatgccattc
acggagaacgggatggttccagacatccttttcaaccctcacggctttccctcccgtatg
accattgggatgttaatcgagagcatggcggggaagtcggcggcgctgcacggcgtctcc
tacgacgccactcccttcaccttcacggagaagaacgccgctttgaaatactttggtgag
actttagtgagcgcaggttataacttctttgggacggaaaagatgtacagtggcatcagc
ggcctggagctggaggcggagatctttgtgggagtggtgtactatcagcgcctgcgccac
atggtctcggacaagttccaggtgaggacaacgggaccccgagacgctgtcaccaaccag
cccatcaaggggaggaacttggaaggtgggattcgcttcggcgagatggagcgtgatgct
ttgctggctcacggcacgtctttcttgctgcaagaccgcctgttcaactgctccgatggc
tccgtagcctacgtctgcatgagctgtggcagcatgacctctcctgtgctggagaaaccg
ccacactcctcctctgtgacaagcaacaggaggtactcctgctccgtctgcagcgaggtg
gacacgatcgaggttgtcccggtgccccacgtcttccgttactttgtggcggagctggca
gccatgaacataaaaacaaagctcaacgtggagtag
DBGET
integrated database retrieval system
