Nipponia nippon (crested ibis): 104016181
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Entry
104016181 CDS
T05756
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nni04040
]
104016181 (TRPA1)
Ion channels [BR:
nni04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104016181 (TRPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
104016181
NCBI-ProteinID:
XP_009467293
LinkDB
All DBs
Position
Unknown
AA seq
1094 aa
AA seq
DB search
MNGLPCNVISDGSACRLRSFIKKNRSGLTKVDELNATPLHHAAEGGQIELMQLIIDDSSC
EALNVMDSSGNTPLHWATKKNQVESVSLLLSRGANPNILNSNMMAPLHMAVQSLHNEIVK
ILVQHSSTDVNLEGEAGNTPIIVACYKDNPEALTLLIENGGKICKPNKTGCMPIHAAAFS
GAKTCMEILLKKGEELGHSAKTHINFTNNGKCSPLHLAVQSGDLEMIKMCIEFGAQIDLK
QNEKCTALHFAATQGATEIVKLMMSSYAGEESIIDAVDGNKETLLHRTALFDHYELAEYL
ISMGANIDSVDIEGRSPLLLATSCASWKIVNLLLSKGANVSLKDHLGRNFLHLTVLQPGG
LQHLNEKFLQMEHIKNLVVDEDNEGCTPLHYACRQGVALSVNNLLSLNVSIYSKSRDKKS
PLHFAASYGRINTCQRLIRDMKDTRLLNEGDKKGMTPLHLAAQNGHEKVVQFLLKRGALF
LCDYKGWTALHHAAFGGYTRTMQIILDTNVKCTDRVDEEGNTALHLAAREGHAKAVRLLL
DYGAKILFNKAVASFFHEAIHNRRKDVVSAVILHKRWEEAVVTFSHYSSANKCPLLEMVE
YLPDSFKLVLDNCIIESSEEKTSRDFYIEYNFRYLQCPLTLNKKLKDGEDIFYEPLTTLN
AMVRHNRMELLSHPVCKEYLLMKWMAYGFRAHLMNLGIYSLGLIPLTLLVTHIQPGRPLN
GTEIYEARPLEYENSYFTRVCMCLVLIMSLLGICKEIFQLIQQKLKYLLDYSNLLDWTIY
TTSIIFVSSLFINTPAHLQWECGAIAVYLSWMNFLLYLQRFENYGIYVVMFWEILRTLIR
IAVVFFFLILAFGLSFFVLLGSQQTYSTPLLSVMKTFAMMLGDINYHDAFLDPLLSNELP
YPFLSYTVLIIFTLLIPILLMNLLIGLAVGDIAEVQKYAALKRIAMQVNLHTNLEKKLPF
WFLSRVDQESITVYPNRPRYCGFMFNVFQYCFGCEDSTTDAQSTDTTLELEVLKQKYRLK
DISTLLEKQHDLIKLIIQKMEIVSEAEDEDSNDLFQHKFRKRQLEHKNSKWDTVLKAVKT
NVPNPSTEKNNSLF
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggctgccctgtaatgtgatttcagatggaagtgcctgtaggctacggagcttc
attaagaagaatcgttctgggcttaccaaagtggatgaattaaatgccaccccactgcat
catgctgcagaaggaggtcaaatagaattaatgcagttgatcatagatgattcttcctgt
gaagcgttaaatgtgatggattcttctggaaataccccactgcactgggccacgaagaaa
aaccaggttgaaagtgttagtttgctcctcagcagaggagccaatccaaacattctcaac
tccaatatgatggcacctttgcatatggccgtgcagtccctgcataatgaaattgttaag
attttagtccagcatagcagtacagatgttaatttggaaggtgaagcagggaacacacct
ataattgtagcatgttacaaggataatcctgaagcactgacactcctgattgaaaatgga
gggaaaatatgtaaaccaaacaaaacaggatgtatgccgatccatgcagctgcattttcg
ggtgcaaaaacatgtatggaaattcttttaaaaaaaggtgaagaattgggtcactctgct
aaaacccacatcaattttaccaataatggaaagtgcagtccacttcatttggcagttcaa
agtggggaccttgaaatgattaaaatgtgcattgaatttggagcccaaattgatctaaaa
cagaatgaaaaatgcacggcacttcattttgctgccactcaaggagcaactgagattgta
aagttaatgatgtcatcctatgctggtgaggaatccattattgatgctgtagatgggaat
aaggaaacattgcttcacaggacagcattgtttgatcattatgaactggcagagtatttg
atttcgatgggggctaatattgatagtgttgacatagaaggtcgatccccgcttctgttg
gccacttcctgtgcatcatggaaaatcgtgaatttactgctctcaaaaggagcaaatgta
tcattaaaagatcatcttggtcggaatttcttgcatttgacggtattgcagcctggagga
ttacagcatctgaatgagaaatttctgcagatggaacacattaaaaatcttgtagtggat
gaagataacgaaggatgcactccattgcattatgcatgcagacaaggtgtggccctctct
gtaaataatttacttagcctcaatgtttccatctactctaagagcagggacaagaagtca
ccgttacactttgctgccagctatgggcgcatcaatacatgtcaacgacttataagagat
atgaaagatacaagacttttgaatgaaggtgataaaaagggaatgactccccttcatttg
gcagcccagaatggtcatgagaaggtagttcagtttcttctgaagagaggggcccttttt
ctgtgtgattataaaggctggacagccctgcaccatgctgccttcggaggatacactcgc
acaatgcagatcattttggatactaacgtgaagtgtactgacagagtggatgaagaaggg
aacacagctttgcacctggctgcaagagaaggacatgcaaaagcagtaaggttacttctt
gactatggtgcaaaaattctgttcaacaaagcagtagcttcttttttccatgaagcaata
cacaacaggagaaaagatgtagtgtctgctgtcattttgcacaaaagatgggaagaagct
gttgtgacattctctcactattctagtgccaataagtgtcccttgctggaaatggttgag
tatcttcctgattcatttaaactggttttggacaactgcataattgagtcttcagaggaa
aagacgagccgagacttctatattgaatataacttcagatatcttcagtgtcccctgaca
cttaacaagaaattaaaggatggtgaagacattttctatgaaccacttaccactttaaat
gccatggtacgccacaatcgcatggagctactcagtcatcctgtgtgtaaagaatatttg
cttatgaaatggatggcctatgggtttcgagcacatctgatgaatttaggcatatattct
ctcggtctcatcccactgactcttctggtcactcacatacagccaggaagacctttgaat
ggaacagagatctatgaagcaagaccattagaatatgagaattcatacttcacaagggtg
tgtatgtgtttagttttaattatgagtttactgggaatctgcaaagaaatatttcagctc
attcagcagaaattgaaatatttgttggattactccaatcttctggactggacaatttat
actacaagcataatttttgtgtcttctttatttattaatacaccagctcatttgcagtgg
gaatgtggagcaattgctgtttacttgtcttggatgaacttcttgctttaccttcaacga
tttgaaaactatggcatctatgttgtgatgttctgggaaattttgaggactttgattcgg
attgctgtcgttttctttttcctgatattggcctttggactaagtttctttgtccttttg
ggttcacagcaaacgtatagcacacctcttctttctgtaatgaagacatttgcaatgatg
ctgggagacattaattaccatgatgcattccttgatccactactaagcaatgaattgcca
tatccattcctgagttacacagttctcattatatttaccttacttattccaatccttctt
atgaacttgctaattggtttggctgttggggacatagctgaagtacaaaaatatgctgca
ctcaagaggattgcaatgcaggttaatcttcacaccaacttagagaagaaactaccgttt
tggttcttaagtcgggtggaccaggaatcaatcactgtatatcccaacaggccgagatac
tgtggatttatgtttaacgtgttccagtattgctttgggtgtgaggactctaccacagat
gcacagagcactgatacaacattagaactggaagttctgaagcagaaatacaggcttaaa
gatatatcaacactgttggaaaagcaacatgacctcattaaattgattatccaaaaaatg
gagatagtgtcagaggctgaggatgaagacagcaatgatttatttcaacacaagtttagg
aaaaggcagttagagcacaagaatagtaaatgggatacagtgttaaaagctgttaaaaca
aatgtgcctaatccaagcacagaaaagaacaatagcttattctag
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integrated database retrieval system
