Nipponia nippon (crested ibis): 104016394
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Entry
104016394 CDS
T05756
Symbol
TRIP12
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIP12
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104016394 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nni04121
]
104016394 (TRIP12)
Enzymes [BR:
nni01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104016394 (TRIP12)
Ubiquitin system [BR:
nni04121
]
Ubiquitin ligases (E3)
HECT type E3
104016394 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
HEAT_2
UNC45-central
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
104016394
NCBI-ProteinID:
XP_009467535
LinkDB
All DBs
Position
Unknown
AA seq
2041 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDAVGGRSHLGQAKHKAHSPPESRKSISKTPKVQ
SNTTSEQSKGHFSKRGCSSSAVLIPQQEDPERVNTSEKQKTGQVPKKDNSRGVKRSASPD
YRRTNSPSSAKKPKALQHTETSLETNKPHTKSKRRYLDQEQPKSTQLPSTSKAHTRKGGA
AGSSRSQKRKRTENLSFIKSGSAXXXESTGAEEKSAKLSKLASKSVTSAKAGCSTITDSS
SSASTSSSSSAVASASSSVPQGARVKQGKDQNKARRSRSASSPSPRRSSRDKEPSKTGGS
SKFDWAARFSPKVSLPKTKLSLPGSSKSESSKPGPSGLQAKLASLRKSTKKRSESPPAEL
PSLRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAARTDEAP
QGAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTI
GSGASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQM
EHNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSR
RHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRL
THQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMV
VRMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLI
CELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEQINEDTG
TARAIQRKPNPLANTNTSGHSELKKDDARAQLMKEDPELAKSFIKTLFGVLYEVYSSSAG
PAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSHIASMLSSQDLKIVVGALQMAEILMQ
KLPDIFSVYFRREGVMHQVKNLAESEALLTSPPKVCTNGSGTLGTTTTISTGTATAASNA
AADLGSPSLQHSREDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSP
TTTQSPKSSFLASLNPKTWGRLSTQSNSNNIEPARTAGVSGLARAASKDTISNNREKIKG
WIKEQAHKFVERYFSSENMDGSNPALNVLQRLCTATEQLNLQVDGGTECLVEIRSIVSES
DVSSFEIQHSGFVKQLLLYLTSKSEKDAVSRDIRLKRFLHVFFSSPLPGEEPLGRLEPLE
NAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTGSSFSLNRGSQALKFFNTHQLKCQLQ
RHPDCANVKQWKGGPVKIDPLALVQAIERYLVVRGYGRVREDDEDSDDDGSDEEIDESLA
AQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAVRQYSLQAEEERESTDDESNPLGRAGIWT
KTHTIWYKPVREDEDGNKDCVGGKRGRAQTAPTKTSPRNSKKHDELWHDGVCPSVLNPLE
VYLISTPPENITFEDPSLDVILLLRVLHAISRYWYYLYDNAICKEIIPTSEFINSKLTAK
ANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPE
INQSDSQDSRVAPRLDRKKRTVNRDELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPT
LEFYALVSQELQRADLGLWRGEEVTLANPKGSQEGTKYIHNLQGLFALPFGRTAKPAHIA
KVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWMLRQETSLTSHDLFSIDPVVAKSIYH
LEDIVRQKKRLEQDKTQTKESLQYALEALTMNGCSVEDLGLDFTLPGFPNIELKKGGKDT
PVTIHNLEEYLRLVIFWALNEGVARQFDSFRDGFESVFPLSHLQYFYPEELEQLLCGSKT
DTWDAKTLMECCRPDHGYTHDSRAVKYLFEILSSFDSEQQRLFLQFVTGSPRLPVGGFRS
LNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSTIEIMREKLLIAAREGQQSFHL
S
NT seq
6126 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gctggggcccagccacaagacgacgcagtaggaggaaggtcacatttagggcaggcaaaa
cataaggcacatagccctcctgagagtagaaaatctatttcaaagacacccaaagtgcag
tctaatactacttctgagcagtccaagggacacttttctaaaagaggctgtagttcatct
gctgttttaataccacaacaagaagatccagagagagtcaatacttcagaaaagcaaaaa
acggggcaagtgcctaagaaagacaattctcgaggagttaaacgcagtgctagtccagat
tacaggaggaccaattctcctagctctgctaaaaaacccaaagcacttcaacacactgaa
acttccttggaaactaacaagccacatactaaatctaagagaagatacttagaccaagaa
cagccgaagtctacacaattgccatcaacaagcaaggctcacaccagaaagggtggagct
gctggtagctcccgaagtcagaaacggaaaaggacagagaatttgtcttttataaagagt
ggttcagcannnnnnnnngaatcaactggcgctgaagagaagtcagcaaaactctccaag
ctggcttcaaaatcggtgacctcagccaaagctgggtgtagcaccatcactgattcttct
tcttcagcttccacatcctcctcctcttctgctgttgcctctgcttcttctagtgttcct
cagggtgccagagtgaaacagggaaaggaccagaataaagctagacgttcccgttctgca
tccagccccagtccaagaaggagtagcagggacaaagaaccgagtaaaacaggtggctct
tcaaagtttgactgggctgctcgattcagccccaaagtcagtctccctaaaacaaaactg
tctctaccaggctcttccaagtctgagtcatcaaaacctggaccttcaggactacaggct
aagctagcaagtctaagaaaatctacaaagaagcgcagtgaatcaccacctgctgagctc
cccagtttgcggcggagcacacggcaaaagaccacgggctcctgtgctagcaccagtcgg
cgaggctctggcctgggcaaaagaggagcagctgaagctcgccgacaggagaagatggct
gatcctgacaacaaccaggatggagttaactcttcagctgcacgtacagatgaggctccc
cagggagctgcagcttctagttctgttgctggggctgtaggtatgacaacctctggagaa
agtgagtcagatgattctgagatgggaagactacaagctctattagaggctaggggtctt
cctcctcacctgtttggccctcttggtcctcggatgtcgcagctcttccacaggacaatt
ggaagtggagctagttctaaagcccaacagcttttacaaggtctccaagccactgatgaa
agtcagcaactacaggcagtgattgagatgtgccagctgttggtcatgggaaatgaagaa
acattaggaggatttccagtcaagagtgttgtaccagctttgataacactgctgcagatg
gagcacaactttgacattatgaaccatgcgtgccgggccttaacatatatgatggaagca
cttcccaggtcatctgctgtagtggtagatgcaattcctgtcttcttggaaaagctgcaa
gttattcagtgcattgatgtggcagagcaggcgcttacagccctggagatgttatcacgc
aggcacagtaaagctattctgcaggcaggtgggttggcggactgtttgctgtatctggaa
ttcttcagtataaatgcacagaggaatgcactagctattgctgccaactgctgccagagt
ataacgcctgatgagtttcactttgtggcagactctttgccactgcttacacaaaggtta
acccatcaggacaaaaagtctgttgaaagcacttgtctctgttttgcacggctagtggac
aacttccagcatgaggagaacttgctccagcaggttgcttccaaggacttgttaacaaat
atccagcaactcctggtagtgacacctcctatcctgagctcaggaatgttcatcatggtg
gtgcgcatgttttccttaatgtgctccaattgtcctacacttgcagtccaacttatgaag
caaaatattgcagaaacgcttcacttccttctttgtggagcctcaaatgggagttgtcaa
gaacaaattgaccttgttccgcgaagtcctcaagaactttatgagcttacttctcttatc
tgtgaactgatgccttgcctgccaaaagagggaatctttgctgttgatactatgctaaag
aaaggaaatgcgcaaaatacagatggtgcaatatggcagtggcgagatgacaggggtctc
tggcatccctataacaggattgatagtcgaataatagagcaaataaatgaggatactgga
acagcgcgtgccattcagcgaaaaccaaaccctttagccaatacaaacactagtggacat
tcagaattgaagaaggatgatgctcgagcacaactaatgaaagaggacccagaactggca
aaatcctttatcaaaacattgtttggtgttctttatgaagtatatagttcttcagctgga
cctgctgttagacacaagtgccttagagcaattcttaggataatttattttgctgatgct
gaacttctgaaggatgtgctgaaaaaccatgctgtttcaagtcatattgcctccatgctg
tcaagtcaagaccttaagatagtagttggagctctacagatggcagagattttaatgcaa
aagttacctgacatttttagtgtttacttcagaagagaaggggtgatgcaccaagtgaaa
aacttagcagagtctgaggctttgctaacaagcccaccgaaagtatgcactaatggatca
ggaacgctgggtaccactacaacaataagtactggaacagccactgctgccagtaatgca
gctgctgatttgggctctcccagcttacaacacagccgggaggattctttggatctgagc
ccacagggacgactgagtgatgttctaaagagaaaaagactgccaaaacgagggccaagg
agaccaaaatactctcctccaagagatgatgacaaagtagacaatcaagctaaaagccct
acaactactcaatctcctaaatcttccttcttggcaagtttaaatcctaaaacatgggga
agattaagcacacagtccaacagtaataatattgaaccagcacgaacagcaggagtaagt
ggtcttgcaagggctgcttccaaggataccatttccaataacagagaaaaaattaagggc
tggattaaggagcaagcccataaatttgtagaacgttattttagttctgaaaacatggat
ggaagcaatcctgcactaaacgtattacagagactttgcactgcaactgaacaactcaac
ctccaggtggatggtggaacagagtgccttgtagaaatccgtagcattgtctcggagtct
gacgtctcctcctttgaaatccagcatagtgggtttgttaaacaactgctgctttatttg
acatctaaaagtgagaaagatgctgtaagcagggatatcagattgaaaagatttcttcat
gtatttttttcttctccacttcctggagaagaacccctcggaagattagagccattagaa
aatgcacctttgctggcattagtccataaaatgaacaattgcctcagtcagatggaacag
tttcctgtcaaagtgcatgacttccctagtggaaatggaacagggagcagtttttctctt
aacagaggatcccaagctttaaaattcttcaatacacatcagttaaaatgtcaactgcaa
agacatccagactgtgctaatgtgaaacagtggaaaggtggacctgtgaagattgatcct
ctggctttggtacaagccattgaaagataccttgtagttagaggctatggaagagttaga
gaagatgatgaggatagtgatgatgatgggtcagatgaagaaatagacgaatctttggct
gctcaattcttaaattcagggaatgtgagacatagactgcaattttacattggagatcac
ttgctgccatacaatatgactgtgtatcaagcagttaggcagtacagtttgcaagctgag
gaggagagggagtctacagatgatgaaagcaacccattaggaagagctgggatttggaca
aaaacacataccatttggtacaaacctgtgcgagaggatgaagatggtaataaggactgt
gttggtggtaaaagaggaagagcacaaacggctcccacgaaaacctcccctagaaattct
aaaaagcatgatgaattgtggcatgacggtgtatgcccttcggtattaaatcctctagaa
gtttacctcatatctactccacctgaaaacataacgtttgaagatccctcattagatgtt
attcttcttttgagagttttacatgctatcagtcgatactggtattacttgtatgataat
gcaatctgcaaggagataattccaacctcagagtttatcaacagtaaactgacagcgaaa
gcaaacaggcagcttcaggatcccttggtaattatgacaggaaacataccaacttggctg
acagaacttggaaaaacatgcccatttttctttccatttgatacccgccaaatgctgttt
tatgtaactgcttttgatcgtgatcgagccatgcaaagactactggatactaatccagaa
atcaatcaatcagattctcaggatagcagagtggcaccacgactggacaggaaaaaacgc
actgtgaacagagatgagctgttgaaacaggcagaatctgtgatgcaggatctaggcagt
tcaagagccatgttggaaatccagtatgagaatgaagttggcacaggcctaggccccacg
ctagagttctatgcacttgtatctcaggaactacagagagcagacttaggcctttggagg
ggagaagaagtgactttagccaatccaaaaggaagccaggaaggtaccaagtacatccat
aaccttcaaggcctttttgcacttccttttggtagaacagccaagccagctcacattgca
aaagttaaaatgaagtttcgctttctgggaaaactaatggccaaggcaatcatggatttt
agactggtggaccttcctcttggacttcctttttataaatggatgttacgacaggaaact
tccttgacatcgcatgacttgttcagtattgatccagtagtagccaaatcaatatatcac
cttgaagatattgtaagacaaaagaaaagacttgaacaggacaaaacacagaccaaagaa
agtctacagtatgcattggaggctctgactatgaatggctgctcagtggaagatctaggg
ctggacttcacactccctgggtttcctaatatagaactgaaaaaagggggaaaagataca
ccagtcaccatccacaatttagaggagtatctcagattggttatattctgggcactaaat
gaaggtgttgccagacagtttgactcattcagagatggatttgaatcggtcttccccctc
agtcatcttcagtacttctatcctgaggagttggagcagctcttgtgcggcagtaaaaca
gacacttgggatgcaaagactttaatggaatgttgcaggccagatcacggttatacacat
gacagtcgagcagtgaagtatctctttgaaattctcagtagctttgatagtgagcagcaa
agactgtttcttcagtttgtgactggtagccccagactgcctgtaggaggctttcgaagt
ttgaatcctccgttgacaattgtacgcaagacatttgagtctacagagaatccagatgat
ttcttgccctcagtaatgacttgtgtgaactatctcaaattgccggactattcaactatt
gagataatgcgtgaaaaactcttgatagctgcaagagaagggcagcagtcattccatctt
tcctga
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