Nipponia nippon (crested ibis): 104016493
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Entry
104016493 CDS
T05756
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04510
Focal adhesion
nni04512
ECM-receptor interaction
nni04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104016493 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104016493 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104016493 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nni04147
]
104016493 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
nni00536
]
104016493 (COL4A3)
Exosome [BR:
nni04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104016493 (COL4A3)
Glycosaminoglycan binding proteins [BR:
nni00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104016493 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104016493
NCBI-ProteinID:
XP_009467662
LinkDB
All DBs
Position
Unknown
AA seq
1644 aa
AA seq
DB search
MSVEKSFAELSQPDWASSGTEYMIAVAGTGHRRVKCCHIHPGSQSCVCKGKSPCFCDSMK
GNKGEKGFPGAPGPPGHRGFPGPEGPPGPQGPKGSPGLTGLVGPKGIRGVPGIPGFSGPP
GLPGEPGTVGPPGRPGVPGCNGTKGDQGFPGPPGRRGAPGIPGITGIKGEKGCPADGYNQ
GFGAKGDPGLPGMPGLQGAQGAQGYPGELGPQGPPGASGMPGKAGPPGPKGLMGLKVIGT
KGRKGDTGLTGPPGPPGTVIVTLSGPDNMTDLKGEKGEKGSRGLPGPMGFTGPVGDSQSE
KGDRGEPGAQGKPGKEGAPGPPGLPGQKGEQGKPGLAGRQGAKVLSNGFVVAYEDETEYY
DYVVGEKGDEGPPGPPGPKGQRGMPGPQGPPGDAGRPGVSRPGLRGPPGFPGPKGTKGEK
GQSGLCIVGPPGLPGITGRPGSVGLPGPPGEPGGVTFRTGLPGLPGEPGCTGPPGPPGDT
GMKGDEACVCTDCSYIPGIPGLPGSPGPHGQDGMPGREGTTGPKGSPGSPGARGFPGAQG
PPGFRGDQGHKGSKGEPGYVYPEGPKGERGDPGARGDKGRKGSSGFPGRPGSKGYKGSKG
EEGLVGSKGDKGLPGLPGSLGLPGEMGLPGLPGYGPQGIRGFKGSKGRPGPPGLPGEAGL
KGETSRITPLPALPGPQGPDGLPGPPGVPGRVGARGEPGDSGHPGPTGDTGFPGLGFPGN
PGPKGDKGLAGGRGSPGCEGKTGDPGRAGNLGQPGEKGDPGMVIPGEPGDRGSPGVPGDP
GFPGKPAECLIGLPGLPGGQGATGPPGGRGLQGSKGKLGRPGLSIPGIYGKPGEPGLIGL
QGNTGLPGPKGQSGRPGISCVPGSRGEPGIMGLLGIPGPPGMIGRPGNPGVRGSSGFPGL
EGRKGFLGAKGEPGDKGFPGPSETLVSIGTKGELGLKGVQGRMGLRGEKGDAGVRGPPGL
DGPEGVPGLPGVKGFMGLPGIPGGQGFPGAPGNKGDMGIPGPKGQKGSPGFPGPSGDPGP
PGYGGFPGDKGDRGYPSPGPPGEPGPKGDPGPPGVLGSKGEKGSRGHPGHKGVPGPHGIR
GETGGAGIPGNIGPPGDIGAKGQQGHPGQQGITGPPGAVGDPGKNGPAGERGNQGQDGMP
GPPGVKGEPGAPGRGIPGLRGIPGHRGIKGDMGLPGFPGPPGMKGHQGDQGPIGPPGLVG
LPGFQGATGMAIPGQKGNRGIAGADGRPGAPGFPGPPGLPTSSIKGSKGVRGADGIPGPT
GPAGDIGPPGPKGIEGRSGYPGARGDPGFPGFPGVKGEKGNQGPPGPQGAEGPRGPKGPP
GVPGRIFSIPGSKGPPGLPGIPGTPGDQGIQGIPGLQGPEGVKGLPGSFGRPGRPGLPGP
KGDRGFPGQRGPPGLIGFPGLQGLPGPPGTIIAGPTRRGFIFTRHSQSTKIPSCPHGTSQ
IYVGYSLLFVQGNERAHGQDLGTAGSCLQRFTTMPFLFCNTNDVCSFASRNDYSYWLSTA
AVMPVDMAPISGRALEPHISRCVVCEGAAMVIAVHSQTTVVPACPEGWMSLWKGFSFVMY
TSAGSEASGQALASPGSCLEEFRAIPFIECHGRGTCNYYTNSYSFWLASLNPRRMFRKPL
PQTLKAGELENIISRCQVCMKRPV
NT seq
4935 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtagaaaagtcctttgcagagttatcccagccagactgggctagctcaggtact
gagtacatgatagctgtagcaggaacagggcacagaagagttaagtgttgtcatattcac
ccaggatctcagagctgtgtatgcaaaggtaaaagtccctgcttttgtgatagcatgaaa
ggtaataagggtgaaaaaggctttcctggtgctccaggtccacctggtcatagaggcttt
cctggtccagaagggcctccagggccacagggaccaaagggttctccagggcttacaggc
ttagttggacccaaaggtatacgaggagtcccaggaatacctggattttcaggtccccca
gggcttccaggtgaaccgggaactgttggtcctcctgggcgcccgggtgttccaggatgc
aacggcacaaagggcgatcaaggttttccaggtcctccaggtagaagaggtgctccaggc
attccaggtattactggcatcaaaggagagaaggggtgccctgcagatggatataaccaa
gggtttggtgcaaaaggtgatcctggattaccaggaatgcctggacttcagggtgcccag
ggtgctcaaggatatcctggggaacttggaccacaaggccctccaggagcttcaggcatg
ccagggaaagcaggacctcctggacctaagggtcttatgggactgaaagtaataggaacc
aaaggaagaaagggtgacactggattaactggaccccctggaccaccaggaactgttatt
gtgacgttaagtggaccagacaacatgacggacttgaaaggagagaaaggagaaaaagga
tcaagaggacttccagggccaatggggtttacagggccagttggtgattctcagagtgaa
aagggtgaccgaggagaacccggagcacagggtaaacctggaaaagaaggtgccccaggt
ccacctggcttaccgggacaaaagggtgaacagggcaaaccaggactggctggcaggcaa
ggagctaaggtattgtctaatggttttgttgttgcttatgaggatgagacagagtattat
gattatgtggttggtgaaaaaggagatgaaggaccccccggacctccaggaccaaaaggt
caacgtggcatgcctgggccacagggtcctcccggagatgctggtagaccaggtgtgtca
agacctggtctgagaggtcccccaggatttcctgggccaaaaggaacaaaaggagagaaa
ggacaaagtggcttgtgtattgtaggccctccaggactacctggtattactggcaggcct
ggttctgttggattaccaggtcctccaggagaaccaggtggagtaacgtttagaacaggc
ctaccaggacttcctggagagccagggtgtacaggacctccaggacctccaggagatact
ggcatgaaaggtgatgaagcttgcgtgtgtactgattgcagctatattccgggaatacct
ggtcttcctggttctcctgggccacatggccaagatggcatgcctggtagagaaggaaca
acaggtccaaaaggttctccaggttctccaggagcacgggggtttccaggagctcaagga
cctccaggttttagaggagatcaaggacataaaggatcaaaaggtgagccaggatatgtg
tatccagaagggccaaaaggtgagcgaggagacccaggggccaggggagacaaaggaaga
aaaggttcaagtggatttccgggaagacctggctctaaagggtacaagggttctaaaggt
gaagagggattggttggttcaaaaggagataaaggactacctggattgcccggcagtctt
ggtcttcctggagagatggggcttcctggactgccaggatatggaccacaaggaataaga
ggtttcaaaggctctaaaggaagacctggtccacctggattacctggagaagctggtctg
aaaggagagaccagcaggataaccccattacctgcgttgccaggacctcaaggaccagat
ggtttacctggacccccaggagtgcctggtagggttggagcaagaggtgagccaggtgat
tcaggacatccagggccaacaggtgacacaggctttccagggctgggatttcctggaaac
ccaggtccaaaaggagataaaggacttgcaggaggcagagggtcaccaggttgtgaagga
aagaccggagatccaggccgagctggaaacctaggacaaccaggagaaaagggtgaccca
ggcatggttattcctggagagccaggagatcgtggctcacctggagttcctggagatcca
ggttttccggggaaacctgctgaatgtcttattggcctgccaggtttgccaggtggccag
ggagctacaggcccaccaggaggaagaggtttgcaaggttcaaaaggaaaactaggtcgt
cctggcttgagtatcccgggaatctatggaaagcctggggaacctggattaataggtctt
cagggaaatacaggattacctggtcccaagggacagtctggaaggccaggaatctcttgt
gtaccaggctcaaggggagagccaggtataatgggcctgttaggaattcctggaccccct
ggcatgattggaagaccaggcaacccaggtgtcagaggttcttctggcttcccaggacta
gagggaagaaaagggtttcttggagcaaaaggcgaaccaggtgataaaggttttcctgga
ccatctgagaccttggtcagtattgggactaaaggagaactaggcttaaaaggagttcaa
ggaagaatgggtctaagaggagaaaaaggagatgccggtgtgcgaggtcccccaggtctt
gacgggcctgaaggagtacctggtctaccaggtgtcaaaggatttatgggtcttccaggg
attcctggaggacaaggattcccaggtgcaccgggaaacaaaggggacatgggaattcca
ggtccaaaaggacagaaaggatctccaggctttccaggaccatcaggtgaccctggtcca
ccaggctatggtggctttccaggtgacaaaggagaccgtgggtacccatctcctgggcct
ccaggagaacctggtccaaagggagatccaggccccccaggagttttgggcagcaaagga
gaaaaaggatcccgaggtcatccaggacataaaggagtaccaggaccacatgggatcaga
ggggagactggaggtgcaggaatcccagggaacattggacctcctggagatattggtgct
aaaggacagcagggccatccaggacaacagggcattacaggccctcctggtgctgttgga
gacccgggaaaaaatggacctgctggtgaaagaggtaatcaaggtcaggatggtatgcct
ggtcccccaggagtaaagggagaaccaggagcaccagggagaggaatccctggccttcga
ggtattcctggtcatagaggaatcaaaggggacatgggactgcctggctttcctgggcca
ccaggtatgaaaggtcatcagggtgatcaaggacccattggacctcctggcttggtgggg
ttacctggatttcaaggtgcaacaggcatggcaattcctggccaaaaagggaacagaggt
attgctggtgcagacggaagaccaggtgctcctggttttccagggcctcctggtcttccc
acttccagcattaaaggaagcaaaggtgttagaggggcagatggcataccagggccaaca
ggcccagccggcgacattggtcctcctggtccaaaaggaatagaaggtcgatcaggttat
cctggtgccagaggggaccctggatttcctggattcccaggtgtaaaaggagaaaagggt
aatcaaggaccccctggaccacaaggtgcagaagggccaaggggaccaaagggtccacct
ggagtgcctgggagaatattctccatcccaggaagcaagggtcctcctggactgccagga
atcccaggaacaccaggtgatcaaggaattcaagggattcctggactacaaggacctgaa
ggagtaaaaggtttaccaggaagttttggtcgtccaggtcgaccaggactgcctggtcca
aaaggagacaggggatttccgggacaaagaggaccacctggactgattggctttccaggt
ctacaggggttacctggaccaccaggtactattattgctggtccaacaagaagaggtttt
atctttactcggcatagtcaatcgacgaagattccttcatgcccacatgggacatcacag
atctatgtcggctattcgctgctttttgtacaaggaaatgaacgagcacatggacaagat
cttggaacagctggtagctgcttgcagagatttaccaccatgccattcttattctgtaac
accaatgatgtttgtagttttgcttctcgcaatgactattcatactggctgtcaactgca
gcagtaatgccagtagacatggcaccaatttctggcagggcactagagccccatataagc
aggtgtgttgtctgtgaaggagctgcaatggtaatagcagttcacagccaaacaactgta
gttcctgcatgtccagaaggctggatgtctctctggaagggtttttcttttgttatgtat
acaagtgccggctcagaagcttctggccaagcattggcatctcctggatcttgtttggaa
gaatttcgagccatcccattcatagagtgccatggcaggggaacgtgtaactactacaca
aattcctacagcttctggttggcatcattaaatccaagaagaatgttcaggaaacctctg
ccacagactttgaaagcaggcgaactggaaaatatcatcagccgttgtcaggtctgcatg
aagagaccagtctaa
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integrated database retrieval system
