KEGG   Nipponia nippon (crested ibis): 104016495
Entry
104016495         CDS       T05756                                 
Symbol
COL4A4
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-4(IV) chain
  KO
K06237  collagen type IV alpha
Organism
nni  Nipponia nippon (crested ibis)
Pathway
nni04382  Cornified envelope formation
nni04510  Focal adhesion
nni04512  ECM-receptor interaction
nni04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:nni00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    104016495 (COL4A4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    104016495 (COL4A4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    104016495 (COL4A4)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    104016495 (COL4A4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nni04147]
    104016495 (COL4A4)
   00536 Glycosaminoglycan binding proteins [BR:nni00536]
    104016495 (COL4A4)
Exosome [BR:nni04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   104016495 (COL4A4)
Glycosaminoglycan binding proteins [BR:nni00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   104016495 (COL4A4)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 104016495
NCBI-ProteinID: XP_009467663
LinkDB
Position
Unknown
AA seq 1654 aa
MALTKDSFERIKWFITSAWWLLIVFAAQEIDGGGYAYIDPCGGQDCSVCRCFPEKGSRGQ
PGGLGAQGPIGSLGSTGPAGLPGEKGQRGENGQPGPAGEKGDKGPTGVPGFPGLDGVPGL
PGIEGPRGKRGLDGCNGSRGDPGFPGENGYIGPRGPYGNPGQKGEKGNSVYVSHFGKGPP
GDRGDPGPPGMPGPRGSRGTTGPSGYPGQPGLPGIPGYPGLPGEQGNPGIGVDGQKGEPG
DVGLPGPPGSPLLVGPPGAQLFKGEKGQKGLPGVTGYRGPRGPKLTFYLLYQGNPGSYGP
AGFPGMKGETGFAGFPGQPGYPGIQGDSGEKGPPGPPGAVGTPLLPIKGPQGDPGFPGPA
GDMGSVGPIGPAGLLGRPGDDGTSLPGLPGVSGAPGPQGFQGDPGFPGTGESIPGRPGFP
GPPGLPGQPGRQGLPGLPSVICTDRGMPGEPGAKGQTGLPGRKGEKGEKGNQGLCSCSAG
PPGPRGMQGPPGTQGKKGQMGYPGRHGEKGDPGLSGAVGLPGLPGTPGSAGQHGEKGEKG
DPGRVRIKGIKGERGPTGVPGFPGQRGNDGRDGELGLPGEKGAEGDSGVPLPGDKGFPGV
PGLPGVKGQMGLPGLGFPGPPGVRGSPGDFGDTGNVGPPGPKGQKGETVCITLPYPGNPG
PPGFKGVQGPKGLKGLPGRPGPNGFDGQKGHRGRPGAGIPGPEGFRGKAGDPGDEGERGS
TVDGKNGPPGPPGIDGQKGVPGDTTYGPPGIPGNRGLPGPPGQPGTPGLPGAKGFRGPEG
DIGAPGCPGFPGPPCDTGLPGPPGLRGVIGLPGPQGLPGFKGQRGDRGLAGLPGIKGLKG
SPGSQGSPGPPGSRGLPGLPGNKGPPGFPGQTGSKGIQGPQGFPGLPGTQGPMGISGVKG
EEGKMGPPGPRGECGDMGRKGERGPPGDSGCVNIRLEKGQKGEPGFPGENGFRGERGEKG
NTGFRGTPGFPGKNGVPGLPGDHGDTGLMGFPGSRGFPGPKGFKGITGFQGQPGDQGDVG
LPGIPGNPGLTGPKGSKGRRGDPTPLLGAHGRKGPPGDPGLPGLCGFPGEKGSPGIQGQP
GRPGSKGDPGYPGIPGFPGATGPQGLPGEPGEKGKRGILGPPGLQGLAGSQGLPGLPGLD
GLDGLKGQKGSAGAAGQSETGPPGYLGELGPEGDRGEPGWPGISIPGPPGERGFPGFPGR
RGPVGPTGPMGRSPDSASPGPPGDQGPPGLDGIRGQPGNPGPPGETIFVRGDPGDTGIRG
APGNPGQRGQQGARGLPGNQGRRGPKGMIXDPGRRGPMGIHGPQGPPGAIGQPGDQGFPG
KPGPRGDPGEPGKIDDSCPAIPGPPGEAGQRGDDGSVGLPGPTGHPGPQGRKGEEGSRGL
PGQDGLPGAPGPPGDQGNRGEQGYAGPQGPPGQTGIPGPPGPHVRSASGFLLVLHSQSDR
EPLCPQGMPKLWTGYSLLYLEGQEKAHNQDLGLAGSCLPVFNTMPFAYCNINQVCYYASR
NDKSYWLSSAAPLPMMPLSEEEIQPYISRCAVCEAPAQAVAVHSQDQSIPPCPVNWRSLW
IGYSFLMHTGSGDQGGGQSLMSPGSCLEDFRSAPFIECQGQRGTCQFFANEYSFWLTTVM
PELQFASAPLSGTLKEGREQRKKISRCQVCMKHG
NT seq 4965 nt   +upstreamnt  +downstreamnt
atggcattaacaaaggattcgtttgaacggattaagtggtttatcacatctgcctggtgg
ctgctgattgtttttgcagcacaagaaattgatgggggaggatatgcatatattgaccca
tgtgggggacaggattgttcagtttgtcggtgcttcccagaaaaaggatcaagaggtcag
cctggtggactgggagctcaaggtccgattgggtccttgggatctacaggaccagctggt
ctgccaggggaaaaaggacagagaggtgagaatgggcagcctgggccagctggagaaaaa
ggtgataagggcccaactggagtcccaggatttcctggtttagatggtgttcctggatta
ccaggaattgaaggacccaggggcaaacgtggtttagatggctgcaatggctcaagaggt
gatccaggatttccaggcgaaaatggttatattggaccgagaggtccttatggaaatcca
gggcaaaaaggagaaaaaggaaattcggtgtatgtttcacattttggaaaaggacctcca
ggagacagaggtgatcctggaccccctggcatgcccggacctagagggtcaagaggtaca
acgggcccatctggatacccaggccaaccaggcttgcctggtattccaggttaccctggt
ttgccaggtgaacagggaaatccaggtattggagtggacggacaaaagggggagccgggg
gacgttggacttcctgggccacctgggtcaccactgttagttggacctcctggagctcag
ctgttcaaaggagaaaagggccaaaaaggactacctggggtaacaggatacagagggcca
cgtggacccaaactcacattctacttgctttatcagggtaatcctggttcttatggacct
gcagggtttcctggaatgaagggggaaacaggatttgctggttttcctggacaacctggc
tatccaggcatacagggggattcaggagaaaaagggcctccaggtcctcctggagctgtt
ggaactccgctgcttcctataaaaggtccacaaggagatcctggatttccgggtcctgct
ggtgatatggggtcagttggaccaattggtcctgcaggcctgctaggaagaccaggagat
gatggaacaagtctgcctggcctgccaggagtaagtggggcaccaggacctcaaggtttt
caaggtgaccctggtttccctggaacaggtgaatcaatcccaggaagacctggatttcct
ggaccaccaggcctaccaggacagccaggaagacaaggcttacctggactacccagtgta
atctgtactgacagagggatgcctggagaacctggagcaaaaggtcagacaggccttccc
ggaagaaaaggtgaaaaaggagaaaagggaaatcaaggcctctgctcatgtagtgctggt
cctcctggtccccgtggtatgcaaggacctccaggtactcaagggaagaaaggacaaatg
ggataccctggaagacatggagaaaagggtgacccaggcttatctggtgcagtgggatta
ccagggctccctggtacacccggttctgctggacaacatggtgaaaaaggagaaaagggt
gatccaggaagggttagaataaaaggaataaaaggtgaaagaggtcctactggggttcca
ggatttccaggccaaagaggtaatgatggcagagatggggaattaggattgcctggggaa
aaaggagctgagggcgattctggagtaccactgccaggtgataaaggattccccggggtc
ccaggacttcctggggtaaaaggacagatgggattgcctggtttggggtttcccggccct
ccaggagtcagaggtagccctggagactttggtgatactggtaatgttgggccacctggt
ccaaagggacagaaaggtgagactgtctgcattacattaccataccctggaaatccaggt
cccccaggttttaaaggtgttcaaggaccaaagggtttaaaaggactccctggtcgtcct
ggaccaaatggctttgatgggcaaaaaggccatcgaggcaggccaggagcaggaatccct
gggccagaaggctttcgaggcaaagctggtgatcctggtgatgaaggtgaaagaggatct
acggttgatggtaaaaatggccctccaggtccacctggcatagatggtcagaaaggtgtt
ccaggtgataccacatatggtcctccaggaatcccaggcaacaggggactgccaggaccc
cctggacagcctggtaccccaggacttccaggtgccaaaggttttagaggcccagaaggt
gatataggagcaccaggttgtccaggcttccctggtccaccatgtgacacaggcttacca
gggccaccaggactcagaggtgtcataggcctgccaggacctcaaggcttaccaggcttt
aaaggtcagaggggagacaggggcctagctgggctacctggaatcaaaggtctcaaaggt
tcccctggctcacaaggttccccaggtcctccaggctcacgaggacttccaggacttcca
ggcaataaaggaccacctggtttcccaggacaaacaggaagcaaagggattcaaggaccc
caaggattcccaggactcccaggaacacaaggcccaatgggaatctctggtgtaaaaggt
gaagaaggaaaaatgggtccacctgggcctcgtggagaatgtggggatatgggaagaaaa
ggtgaaagagggcctccaggagacagtggctgcgttaacatccgtcttgagaaaggacaa
aagggggaaccagggtttcctggtgagaacggctttagaggtgaaagaggtgaaaaaggc
aatactggtttcagaggcaccccaggatttccagggaaaaatggtgtcccaggactgcca
ggtgaccatggtgacactggactgatgggctttccaggatcacggggttttccaggacca
aagggctttaaaggaattacgggttttcaaggacaaccaggtgaccagggtgacgttggc
ttaccaggaatccctggaaatccaggactgactggcccaaaaggatctaaaggcaggaga
ggtgacccaactcctctgcttggtgcacatggtcgaaaagggcctcctggagatccagga
ttaccaggactctgtggattcccaggagagaagggttcaccaggtatccaagggcaacca
ggaagaccaggatccaagggcgaccctggatacccaggaatacctggatttccaggagct
acaggtcctcagggattgccaggagaacctggagaaaaagggaaacgtggaattttggga
cctccaggattgcaaggattagctggatcccaaggtcttcctggactgcccggactggat
ggcttggatggactaaaaggtcaaaaaggttctgcaggagctgcaggtcaaagtgaaaca
gggcccccaggatacttgggagaacttggaccagaaggagacagaggtgaacctggatgg
cctggtatttctattccaggcccccctggagaaaggggattcccaggattcccaggtaga
agaggacctgttggacccactggacctatgggaagatctcctgatagtgcttctcctggt
cctccaggtgatcaaggaccacctggtttagatggcatcagaggtcagcctgggaatcct
ggtcctcctggagagactatctttgtacgaggagatccaggtgataccggtattcgaggg
gcaccaggtaatcctgggcagcgagggcaacaaggagccagaggtcttccagggaaccaa
ggaagaagaggcccaaagggtatgatctgagatccaggcaggagaggtcctatgggaatc
catggaccacaaggtccacctggtgctataggacaaccgggagaccaaggttttccggga
aaacctggtcccagaggtgaccctggtgaaccaggaaaaatagatgattcatgccctgca
atcccagggcctcctggggaagcagggcaaagaggagacgatggctctgtaggattacca
gggcccacaggccaccctggaccccaaggaagaaaaggtgaagaagggtcacgtggcctg
ccaggtcaagatggtttacctggggcacctggaccgccaggtgaccaggggaatagagga
gagcaaggatatgccgggccacaaggtccacctggccagaccggtatcccaggaccacca
ggcccccatgttagatctgcaagtggattcttgctcgtccttcacagtcagtcggacaga
gaaccactctgtccacaagggatgccaaaattatggactggctatagtctgctctacctg
gaaggacaagagaaagctcataatcaagatcttggtctggcaggatcttgtcttcctgtg
tttaataccatgccctttgcttactgtaatatcaaccaagtttgttactatgccagtcga
aatgataagtcttactggttgtcaagtgctgctcctttaccaatgatgccactctctgaa
gaagaaatacagccatacataagcagatgtgctgtatgcgaggccccggcccaagcggta
gcagttcacagccaagatcagtcaattcctccctgcccagtgaactggaggagtctttgg
ataggatattcttttttgatgcacactggatctggtgatcagggtggtggacagtccctt
atgtcacctggaagttgcctagaagacttcagatcagcaccattcatcgaatgccagggc
cagcggggaacgtgtcaattttttgctaatgaatacagtttctggctaacaaccgtgatg
cccgaattgcagtttgcgtcagcccccctgtcaggaactcttaaagaaggacgagagcag
aggaaaaaaatcagtagatgccaggtatgcatgaagcatggctaa

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