Nipponia nippon (crested ibis): 104016495
Help
Entry
104016495 CDS
T05756
Symbol
COL4A4
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04382
Cornified envelope formation
nni04510
Focal adhesion
nni04512
ECM-receptor interaction
nni04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104016495 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104016495 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104016495 (COL4A4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104016495 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nni04147
]
104016495 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
nni00536
]
104016495 (COL4A4)
Exosome [BR:
nni04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104016495 (COL4A4)
Glycosaminoglycan binding proteins [BR:
nni00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104016495 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104016495
NCBI-ProteinID:
XP_009467663
LinkDB
All DBs
Position
Unknown
AA seq
1654 aa
AA seq
DB search
MALTKDSFERIKWFITSAWWLLIVFAAQEIDGGGYAYIDPCGGQDCSVCRCFPEKGSRGQ
PGGLGAQGPIGSLGSTGPAGLPGEKGQRGENGQPGPAGEKGDKGPTGVPGFPGLDGVPGL
PGIEGPRGKRGLDGCNGSRGDPGFPGENGYIGPRGPYGNPGQKGEKGNSVYVSHFGKGPP
GDRGDPGPPGMPGPRGSRGTTGPSGYPGQPGLPGIPGYPGLPGEQGNPGIGVDGQKGEPG
DVGLPGPPGSPLLVGPPGAQLFKGEKGQKGLPGVTGYRGPRGPKLTFYLLYQGNPGSYGP
AGFPGMKGETGFAGFPGQPGYPGIQGDSGEKGPPGPPGAVGTPLLPIKGPQGDPGFPGPA
GDMGSVGPIGPAGLLGRPGDDGTSLPGLPGVSGAPGPQGFQGDPGFPGTGESIPGRPGFP
GPPGLPGQPGRQGLPGLPSVICTDRGMPGEPGAKGQTGLPGRKGEKGEKGNQGLCSCSAG
PPGPRGMQGPPGTQGKKGQMGYPGRHGEKGDPGLSGAVGLPGLPGTPGSAGQHGEKGEKG
DPGRVRIKGIKGERGPTGVPGFPGQRGNDGRDGELGLPGEKGAEGDSGVPLPGDKGFPGV
PGLPGVKGQMGLPGLGFPGPPGVRGSPGDFGDTGNVGPPGPKGQKGETVCITLPYPGNPG
PPGFKGVQGPKGLKGLPGRPGPNGFDGQKGHRGRPGAGIPGPEGFRGKAGDPGDEGERGS
TVDGKNGPPGPPGIDGQKGVPGDTTYGPPGIPGNRGLPGPPGQPGTPGLPGAKGFRGPEG
DIGAPGCPGFPGPPCDTGLPGPPGLRGVIGLPGPQGLPGFKGQRGDRGLAGLPGIKGLKG
SPGSQGSPGPPGSRGLPGLPGNKGPPGFPGQTGSKGIQGPQGFPGLPGTQGPMGISGVKG
EEGKMGPPGPRGECGDMGRKGERGPPGDSGCVNIRLEKGQKGEPGFPGENGFRGERGEKG
NTGFRGTPGFPGKNGVPGLPGDHGDTGLMGFPGSRGFPGPKGFKGITGFQGQPGDQGDVG
LPGIPGNPGLTGPKGSKGRRGDPTPLLGAHGRKGPPGDPGLPGLCGFPGEKGSPGIQGQP
GRPGSKGDPGYPGIPGFPGATGPQGLPGEPGEKGKRGILGPPGLQGLAGSQGLPGLPGLD
GLDGLKGQKGSAGAAGQSETGPPGYLGELGPEGDRGEPGWPGISIPGPPGERGFPGFPGR
RGPVGPTGPMGRSPDSASPGPPGDQGPPGLDGIRGQPGNPGPPGETIFVRGDPGDTGIRG
APGNPGQRGQQGARGLPGNQGRRGPKGMIXDPGRRGPMGIHGPQGPPGAIGQPGDQGFPG
KPGPRGDPGEPGKIDDSCPAIPGPPGEAGQRGDDGSVGLPGPTGHPGPQGRKGEEGSRGL
PGQDGLPGAPGPPGDQGNRGEQGYAGPQGPPGQTGIPGPPGPHVRSASGFLLVLHSQSDR
EPLCPQGMPKLWTGYSLLYLEGQEKAHNQDLGLAGSCLPVFNTMPFAYCNINQVCYYASR
NDKSYWLSSAAPLPMMPLSEEEIQPYISRCAVCEAPAQAVAVHSQDQSIPPCPVNWRSLW
IGYSFLMHTGSGDQGGGQSLMSPGSCLEDFRSAPFIECQGQRGTCQFFANEYSFWLTTVM
PELQFASAPLSGTLKEGREQRKKISRCQVCMKHG
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atggcattaacaaaggattcgtttgaacggattaagtggtttatcacatctgcctggtgg
ctgctgattgtttttgcagcacaagaaattgatgggggaggatatgcatatattgaccca
tgtgggggacaggattgttcagtttgtcggtgcttcccagaaaaaggatcaagaggtcag
cctggtggactgggagctcaaggtccgattgggtccttgggatctacaggaccagctggt
ctgccaggggaaaaaggacagagaggtgagaatgggcagcctgggccagctggagaaaaa
ggtgataagggcccaactggagtcccaggatttcctggtttagatggtgttcctggatta
ccaggaattgaaggacccaggggcaaacgtggtttagatggctgcaatggctcaagaggt
gatccaggatttccaggcgaaaatggttatattggaccgagaggtccttatggaaatcca
gggcaaaaaggagaaaaaggaaattcggtgtatgtttcacattttggaaaaggacctcca
ggagacagaggtgatcctggaccccctggcatgcccggacctagagggtcaagaggtaca
acgggcccatctggatacccaggccaaccaggcttgcctggtattccaggttaccctggt
ttgccaggtgaacagggaaatccaggtattggagtggacggacaaaagggggagccgggg
gacgttggacttcctgggccacctgggtcaccactgttagttggacctcctggagctcag
ctgttcaaaggagaaaagggccaaaaaggactacctggggtaacaggatacagagggcca
cgtggacccaaactcacattctacttgctttatcagggtaatcctggttcttatggacct
gcagggtttcctggaatgaagggggaaacaggatttgctggttttcctggacaacctggc
tatccaggcatacagggggattcaggagaaaaagggcctccaggtcctcctggagctgtt
ggaactccgctgcttcctataaaaggtccacaaggagatcctggatttccgggtcctgct
ggtgatatggggtcagttggaccaattggtcctgcaggcctgctaggaagaccaggagat
gatggaacaagtctgcctggcctgccaggagtaagtggggcaccaggacctcaaggtttt
caaggtgaccctggtttccctggaacaggtgaatcaatcccaggaagacctggatttcct
ggaccaccaggcctaccaggacagccaggaagacaaggcttacctggactacccagtgta
atctgtactgacagagggatgcctggagaacctggagcaaaaggtcagacaggccttccc
ggaagaaaaggtgaaaaaggagaaaagggaaatcaaggcctctgctcatgtagtgctggt
cctcctggtccccgtggtatgcaaggacctccaggtactcaagggaagaaaggacaaatg
ggataccctggaagacatggagaaaagggtgacccaggcttatctggtgcagtgggatta
ccagggctccctggtacacccggttctgctggacaacatggtgaaaaaggagaaaagggt
gatccaggaagggttagaataaaaggaataaaaggtgaaagaggtcctactggggttcca
ggatttccaggccaaagaggtaatgatggcagagatggggaattaggattgcctggggaa
aaaggagctgagggcgattctggagtaccactgccaggtgataaaggattccccggggtc
ccaggacttcctggggtaaaaggacagatgggattgcctggtttggggtttcccggccct
ccaggagtcagaggtagccctggagactttggtgatactggtaatgttgggccacctggt
ccaaagggacagaaaggtgagactgtctgcattacattaccataccctggaaatccaggt
cccccaggttttaaaggtgttcaaggaccaaagggtttaaaaggactccctggtcgtcct
ggaccaaatggctttgatgggcaaaaaggccatcgaggcaggccaggagcaggaatccct
gggccagaaggctttcgaggcaaagctggtgatcctggtgatgaaggtgaaagaggatct
acggttgatggtaaaaatggccctccaggtccacctggcatagatggtcagaaaggtgtt
ccaggtgataccacatatggtcctccaggaatcccaggcaacaggggactgccaggaccc
cctggacagcctggtaccccaggacttccaggtgccaaaggttttagaggcccagaaggt
gatataggagcaccaggttgtccaggcttccctggtccaccatgtgacacaggcttacca
gggccaccaggactcagaggtgtcataggcctgccaggacctcaaggcttaccaggcttt
aaaggtcagaggggagacaggggcctagctgggctacctggaatcaaaggtctcaaaggt
tcccctggctcacaaggttccccaggtcctccaggctcacgaggacttccaggacttcca
ggcaataaaggaccacctggtttcccaggacaaacaggaagcaaagggattcaaggaccc
caaggattcccaggactcccaggaacacaaggcccaatgggaatctctggtgtaaaaggt
gaagaaggaaaaatgggtccacctgggcctcgtggagaatgtggggatatgggaagaaaa
ggtgaaagagggcctccaggagacagtggctgcgttaacatccgtcttgagaaaggacaa
aagggggaaccagggtttcctggtgagaacggctttagaggtgaaagaggtgaaaaaggc
aatactggtttcagaggcaccccaggatttccagggaaaaatggtgtcccaggactgcca
ggtgaccatggtgacactggactgatgggctttccaggatcacggggttttccaggacca
aagggctttaaaggaattacgggttttcaaggacaaccaggtgaccagggtgacgttggc
ttaccaggaatccctggaaatccaggactgactggcccaaaaggatctaaaggcaggaga
ggtgacccaactcctctgcttggtgcacatggtcgaaaagggcctcctggagatccagga
ttaccaggactctgtggattcccaggagagaagggttcaccaggtatccaagggcaacca
ggaagaccaggatccaagggcgaccctggatacccaggaatacctggatttccaggagct
acaggtcctcagggattgccaggagaacctggagaaaaagggaaacgtggaattttggga
cctccaggattgcaaggattagctggatcccaaggtcttcctggactgcccggactggat
ggcttggatggactaaaaggtcaaaaaggttctgcaggagctgcaggtcaaagtgaaaca
gggcccccaggatacttgggagaacttggaccagaaggagacagaggtgaacctggatgg
cctggtatttctattccaggcccccctggagaaaggggattcccaggattcccaggtaga
agaggacctgttggacccactggacctatgggaagatctcctgatagtgcttctcctggt
cctccaggtgatcaaggaccacctggtttagatggcatcagaggtcagcctgggaatcct
ggtcctcctggagagactatctttgtacgaggagatccaggtgataccggtattcgaggg
gcaccaggtaatcctgggcagcgagggcaacaaggagccagaggtcttccagggaaccaa
ggaagaagaggcccaaagggtatgatctgagatccaggcaggagaggtcctatgggaatc
catggaccacaaggtccacctggtgctataggacaaccgggagaccaaggttttccggga
aaacctggtcccagaggtgaccctggtgaaccaggaaaaatagatgattcatgccctgca
atcccagggcctcctggggaagcagggcaaagaggagacgatggctctgtaggattacca
gggcccacaggccaccctggaccccaaggaagaaaaggtgaagaagggtcacgtggcctg
ccaggtcaagatggtttacctggggcacctggaccgccaggtgaccaggggaatagagga
gagcaaggatatgccgggccacaaggtccacctggccagaccggtatcccaggaccacca
ggcccccatgttagatctgcaagtggattcttgctcgtccttcacagtcagtcggacaga
gaaccactctgtccacaagggatgccaaaattatggactggctatagtctgctctacctg
gaaggacaagagaaagctcataatcaagatcttggtctggcaggatcttgtcttcctgtg
tttaataccatgccctttgcttactgtaatatcaaccaagtttgttactatgccagtcga
aatgataagtcttactggttgtcaagtgctgctcctttaccaatgatgccactctctgaa
gaagaaatacagccatacataagcagatgtgctgtatgcgaggccccggcccaagcggta
gcagttcacagccaagatcagtcaattcctccctgcccagtgaactggaggagtctttgg
ataggatattcttttttgatgcacactggatctggtgatcagggtggtggacagtccctt
atgtcacctggaagttgcctagaagacttcagatcagcaccattcatcgaatgccagggc
cagcggggaacgtgtcaattttttgctaatgaatacagtttctggctaacaaccgtgatg
cccgaattgcagtttgcgtcagcccccctgtcaggaactcttaaagaaggacgagagcag
aggaaaaaaatcagtagatgccaggtatgcatgaagcatggctaa
DBGET
integrated database retrieval system
