KEGG   Nipponia nippon (crested ibis): 104016571
Entry
104016571         CDS       T05756                                 
Symbol
PCDH12
Name
(RefSeq) protocadherin-12
  KO
K16499  protocadherin delta 2
Organism
nni  Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:nni00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:nni04515]
    104016571 (PCDH12)
Cell adhesion molecules [BR:nni04515]
 Cadherins
  Protocadherins
   104016571 (PCDH12)
SSDB
Motif
Pfam: Cadherin Cadherin_2
Other DBs
NCBI-GeneID: 104016571
NCBI-ProteinID: XP_009467754
LinkDB
Position
Unknown
AA seq 1141 aa
MRQQVDKPAAACWGSRAVGFASSMLLLSRSALHFPALWWYLFLSTDAQEVATFTVQYRVF
EEVPLGTVIGTLAEHFEGGESGETADAFQLMETPRRFPLHVGSGDGVLSTAGRVDREQLC
RHSNPCWVSFDVLAARNLALIHVEVQVLDVNDNAPRFPTPELELEMSESASLRTRIPLDR
ALDADTGPNARCSYALSPSEHFALEVISSSDGTKHAELVVVKEVDRELHSYFDLVLMATD
HGEPPKSGTALIKVIVLDSNDNSPVFEESSLTVEVREDALPGTLLVTVTATDPDQGPNGE
IEYSLSKHAPPEVLSAFGIDARTGSIILKHSLDYEETHAYELDVQARDLGANPIPAHCKI
LVKVLDVNDNAPDVHITWAAWAPVLSEALPKDSFVALVTASDPDSGSNGEVHCSLSQGYE
HFRLKRTNSHSYMLMTNATLDRELRAEYNLTLVVRDQGDLSLAVLKHLTICISDVNDNAP
SFEKATYEVAVAENSEAPAFLLTVHATDPDLGFNGKITYSIPDTSASGVVSIDPTTGDVF
ALQAFDYEQVRSLEFLVTAEDGGHPKLVSKVSIRLAVLDRNDNAPVITAPALVGGAATVS
VLVNVETGCFWVVPGNGSTQGTAAVTNATLTSCVGAPFLFTIVARDVDSGINGVLRYDLV
GGDDAGLFILDPLLGQVSLNTSNASSLAGSERELVVQVSDGGDIPLHTLARFRLVFRHHG
AFSKISAQDPGWLSPSVVAVICLATVLGGCLLLLVLTLSLRKKEKKDGMAYNCREAEDAR
RQQQLKKPHRQIQKTDIHLIPLLRGRPQEAEPPRPCQEDLPGTAAPALGDSPQAPLHLTP
TLYRTLRNQRTQKDSDEQQGTFSLPILQRRPCQPHRQKNSSKEAVSPPDAPPHCKSLVKP
PQGPPHQHILRSLVRLSLVALAEQSPTGEFAMESPPVQQISQLLSLLHQGQFQPKTNHRG
NKYTAKNGSRAAGLDADCLSTKDSGHGESEAEDRDSESGFELSVQQLVGEELETLLEPQA
ELALKRLTAADPAWVARLSLPLTSSYKDNVFSPDSLHSPQDEEAARQEKPRTFETFGKGA
GADSNAAGTRLASTFLSEMSTLFEMILSQKVQVHNETGSGLLRQLSARGKSLGLEDSAPV
L
NT seq 3426 nt   +upstreamnt  +downstreamnt
atgcggcagcaggtggacaagcctgcagcagcgtgctggggcagcagggcggtgggcttc
gccagcagcatgctgctgctgagccgctccgctctccatttcccagccttgtggtggtac
ctcttcctctccaccgatgcccaggaggtggccacgttcacggtgcagtaccgggtgttt
gaagaagtgccgctgggaacggtgatagggacgctggccgagcattttgagggcggtgag
agcggcgaaacggcggatgccttccagctgatggagacccccaggaggttcccactgcac
gtggggagcggggacggggtgctcagcacggctgggcgggtggacagggagcagctgtgc
cggcacagcaatccctgctgggtctcgtttgatgtgctggctgcccgaaacctggctctg
attcatgtggaggttcaagtgctggatgtcaacgacaacgcgccacggttccccacaccc
gagctggagctggagatgtcggagagcgcatccctgcggacacggatcccgctggaccga
gccctggacgctgataccggccccaacgcccgctgctcctacgccctctcccccagcgag
cactttgcactggaggtcatctccagctccgatgggacaaagcatgcggagcttgtcgtg
gttaaagaagtggaccgggagctgcactcctattttgaccttgtgctgatggccactgat
cacggggagccaccaaaatcaggtaccgctttaattaaagtcatcgtccttgactccaat
gataacagccccgtctttgaagagagctctttgacggtagaagttcgggaggatgctctg
cctgggaccctccttgtgacagtcacagccaccgaccccgaccagggccccaatggggag
atcgagtacagcctgagcaagcatgcacccccggaggtgctgagtgctttcggcatcgat
gcccgcacagggagcatcatcctgaagcactcactggactacgaggaaacccatgcctat
gagctggatgtgcaagcccgggacctgggcgccaaccccatcccagcacactgcaagatc
ctggtcaaggtcctggatgtcaacgacaatgctcctgacgtccacatcacctgggctgcg
tgggcgcccgtgctctctgaagccctccccaaagacagctttgtggctctggtgacggcc
agcgaccctgattcgggaagcaatggggaagtgcattgctccctcagtcaagggtacgag
cacttcaggctgaagaggactaacagccacagctacatgctgatgaccaacgccacgctg
gacagggagctgcgtgccgagtacaacctgacgttggtggtgcgggaccagggtgacctc
tccttggccgtgctgaagcacctcactatctgcatcagcgatgtcaacgacaacgccccc
tccttcgagaaggccacctacgaggttgctgttgctgagaacagcgaagcacctgccttc
ttgctcactgtccatgccaccgaccccgacctgggtttcaacgggaaaatcacctacagc
atcccagacacctctgcttcaggtgtggtctcaatcgaccccaccactggggatgttttt
gccctccaagcttttgattacgagcaggtgaggagcctggagttcctggtgactgcagag
gatggtggtcaccccaagctggtgtccaaagtctccatcaggctggcggtgcttgaccgg
aacgacaatgcacccgtcatcactgcgccggcgctggtgggaggcgcagccacggtctcc
gtcctggttaatgtggagacagggtgcttctgggtggtccctgggaacgggagcacccaa
gggactgcagcagtgaccaatgcaacactcacgtcgtgtgttggcgctcccttcctcttc
accatcgtggccagggatgtggactccggcatcaacggggtgctccggtatgatctggtg
ggtggggatgatgccgggctcttcatcctggaccctctcttggggcaggtctccctcaac
accagcaatgccagcagccttgccggcagcgagcgggagctggtggtccaggtgagcgat
gggggggacatccccctgcacaccctggcccggttccgcttagttttccggcatcacggg
gcgttctccaaaatctcagcccaggatcccgggtggctgagcccgtccgtggtggctgtt
atctgcctggccactgtcctgggtgggtgccttctccttttggttttaaccctgtctttg
cgtaagaaggagaagaaggacggcatggcctacaactgcagggaggcagaggatgctcgc
aggcagcagcagctcaagaagccacacagacagatccagaagacagatatccacctcatc
ccgctgctccggggccggccccaggaggctgagcccccccgtccctgccaggaggatctg
cctggcacagctgcccctgcgctgggggactccccgcaggctcccctccacctcaccccc
actctctacaggaccctgagaaatcagaggacccaaaaggactcagatgagcagcagggg
accttcagcctgcccatcctgcagcgccggccctgccagccccacagacagaaaaattcg
tcgaaagaggctgtgagccccccggatgcaccaccacactgcaagagcttggtgaagcca
ccacaggggcccccccaccagcacatcctcaggagcctggtccggctgtcgctggtggca
ctggcagagcagagccccactggggagtttgcgatggagtcgcccccggtgcagcaaatc
tcccagctgctctccctgctgcaccagggccagttccagcccaaaacaaaccacagggga
aacaagtacacggccaagaatggcagcagggctgcggggctggatgctgactgcttgagc
acaaaggacagtgggcacggtgagagcgaggcagaggaccgcgattcggaaagcgggttt
gagctctccgtgcagcagctggtgggagaggagctggagaccctcctggagccgcaggca
gagctggccctcaagaggctgacagctgctgacccagcatgggtggctcggctctccttg
ccgctcaccagtagttacaaggacaacgtcttctcccctgactctctgcattcacctcag
gatgaggaagctgcaaggcaggagaaaccaaggacctttgagaccttcggcaaaggtgct
ggggctgactcaaatgccgctgggacaagactggccagcaccttcctttcagaaatgagc
accctctttgaaatgattttgtcccagaaggtccaagtccacaatgaaacgggctcggga
cttctgcggcagctgtcagcacgtgggaagagccttggactggaagacagtgctcctgtt
ctgtag

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