Nipponia nippon (crested ibis): 104016578
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Entry
104016578 CDS
T05756
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04142
Lysosome
nni04144
Endocytosis
nni05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104016578 (CLTC)
04142 Lysosome
104016578 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
104016578 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nni04131
]
104016578 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nni04147
]
104016578 (CLTC)
Membrane trafficking [BR:
nni04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
104016578 (CLTC)
Exosome [BR:
nni04147
]
Exosomal proteins
Proteins found in most exosomes
104016578 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
104016578
NCBI-ProteinID:
XP_009467762
LinkDB
All DBs
Position
Unknown
AA seq
1651 aa
AA seq
DB search
MESDKFICIREKVGEQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKAGKTLQIF
NIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGC
QIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAE
ESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISDKHD
VVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAQHEATAGIIGVNRKGQVLSVCVEE
ENIIPYITNVLQNPDLALRMAVRNNLAGAEELFARKFNALFAQGNYSEAAKVAANAPKGI
LRTPDTIRRFQSVPAQPGQTSPLLQYFGILLDQGQLNKYESLELCRPVLQQGRKQLLEKW
LKEDKLECSEELGDLVKSVDPTLALSVYLRANVPNKVIQCFAETGQVQKIVLYAKKVGYT
PDWIFLLRNVMRISPDQGQQFAQMLVQDEEPLADITQIVDVFMEYNLIQQCTAFLLDALK
NNRPSEGPLQTRLLEMNLMHAPQVADAILGNQMFTHYDRAHIAQLCEKAGLLQRALEHFT
DLYDIKRAVVHTHLLNPEWLVNYFGSLSVEDSLECLRAMLSANIRQNLQICVQVASKYHE
QLSTQSLIELFESFKSFEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRES
NCYDPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSR
LPVVIGGLLDVDCSEDVIKNLILVVRGQFSTDELVAEVEKRNRLKLLLPWLEARIHEGCE
EPATHNALAKIYIDSNNNPERFLRENPYYDSRVVGKYCEKRDPHLACVAYERGQCDLELI
NVCNENSLFKSLSRYLVRRKDPELWASVLLESNPYRRPLIDQVVQTALSETQDPEEVSVT
VKAFMTADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYD
APDIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQL
AKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAANASGNWEELVKYLQMARKKARESYVET
ELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYEAAKLLYNNVSNFGRLASTL
VHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQ
DRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRA
AEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIITKVANVELYYKAVQFY
LEFKPLLLNDLLMVLSPRLDHTRAVTFFTKVKQLPLVKPYLRSVQNHNNKSVNESLNNLF
IIEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKD
RLYKDAMQYASESKDTELAEELLQWFLQENKRECFGACLFTCYDLLRPDVVLETAWRHNI
MDFAMPYFIQVMKEYLTKVDAIKEKVDKLDASESLRKEEEQATETQPIVYGQPQLMLTAG
PSVAVPPQAPFGYGYTAPPYGQPQPGFGYSM
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgacaaattcatctgcataagagaaaaagtaggagaacaggctcaagtggtg
attattgacatgaatgaccccagcaaccctattcgaagaccaatttcagccgacagtgct
atcatgaaccctgccagtaaagtcattgcgttaaaagctgggaaaacgcttcaaatattt
aacattgaaatgaagagcaaaatgaaggctcatacaatgacagatgatgttaccttctgg
aagtggatctctctgaatactgttgcccttgtaacggataatgcagtctaccattggagt
atggagggggagtcccagcctgtgaaaatgtttgatcgccattctagtcttgctggctgc
cagatcatcaactaccgtactgatgcgaagcagaaatggctgctgctaactggcatatct
gcgcagcaaaatcgtgttgtgggagcaatgcagctatattctgtagacagaaaagtgtca
caaccaattgagggacatgcagctagctttgcgcagttcaagatggaaggaaatgctgaa
gaatccactctattctgttttgcagtaagagggcaagctgggggtaagttgcatatcatt
gaagttggcacaccacctactgggaatcagccatttccaaagaaagcagtggatgtcttc
tttcctcctgaagcacaaaatgactttccagttgccatgcagatcagcgacaagcatgat
gtggtgtttctcataacgaaatatggctatatccacttgtatgacctggaaactggcacc
tgtatctacatgaacagaatcagtggagagaccatatttgttactgcacagcatgaagca
acagctggaattattggagtaaacagaaagggacaagtgctctcagtgtgtgtggaagaa
gagaatattattccctatatcacaaatgtgctgcagaatcctgacctagctttacgaatg
gctgtccgcaacaatctggcaggtgctgaggaactctttgccagaaaattcaatgcactg
tttgcacaagggaactattcggaggcagcaaaagtggcagctaacgccccaaagggaatc
ctgcgtactccagacaccatacgccggttccagagtgttccagctcagccgggacagact
tcccctttactccaatacttcggcattctgcttgaccaagggcagctgaataaatacgag
tcgctggaactctgcagaccagtgcttcagcagggacgcaaacagctcttggaaaaatgg
ttaaaagaagataagctggagtgctcagaggagttgggagaccttgtgaaatctgtagat
cctacgctagcacttagtgtctatctgagagccaacgttccaaacaaagtcatccagtgt
tttgccgaaacaggacaagtccagaagattgttttgtatgctaagaaggttggatatact
ccagactggatttttttgctgaggaatgtaatgagaatcagccctgatcaaggacagcag
tttgcacaaatgcttgttcaagatgaagagccgcttgcagacataacacaaattgtggat
gtctttatggaatataatttaattcagcaatgtacagccttcttgctggatgcactgaag
aataatcgtccctcagaaggtcccctgcaaacacgtttacttgagatgaacctcatgcat
gcacctcaggttgcagatgctatcctgggaaaccaaatgtttactcattatgaccgggct
cacatagctcagctgtgtgagaaagctggcttgctacagagagcacttgaacacttcaca
gacttgtatgacatcaagcgtgcagtagttcacactcatcttctcaatcctgagtggtta
gtgaattattttggttccttatcggtagaagactctctggagtgtctgcgtgctatgttg
tctgctaacattcgtcagaacctgcagatctgtgtccaggtagcttcaaagtaccatgaa
caactgtcaacacagtcacttattgagctgtttgagtctttcaagagctttgaaggtttg
ttttatttcctgggctctattgtaaacttcagccaggatccagatgtgcacttcaagtat
attcaagctgcatgcaagacaggacaaattaaagaggtggaaagaatctgcagggaaagt
aactgctatgatccagaacgtgttaaaaacttcctcaaggaagctaaactcactgaccag
ttgccactcatcattgtatgtgatcgctttgactttgtccacgacttggtgctgtacttg
tatagaaataatctccaaaaatatattgagatttacgtacagaaggtgaatccaagccgt
ctgcctgttgttattgggggactgcttgatgtggattgctctgaagatgtgataaagaac
cttattcttgtagtgagaggtcaattttcgactgatgagcttgttgcagaggttgagaaa
agaaacaggctgaaactgcttctgccctggctggaagcaagaattcacgagggttgtgag
gagcctgcaactcacaatgcactggccaaaatatacattgatagcaacaacaacccagaa
agattcctgcgtgagaatccttattacgatagtcgcgttgttggcaagtactgtgagaag
agggaccctcacctggcctgcgtggcttatgagcgtggacaatgcgatttggaacttatt
aatgtctgcaatgagaactccctcttcaaaagtctttcccgctacttagttcgccgtaaa
gaccctgaactgtgggccagcgtactactggaaagcaacccttacagaagaccgctaatt
gaccaggttgtacagactgcgctgtcagagacgcaggaccctgaggaagtctctgttact
gtgaaggccttcatgactgcagatcttcctaatgagctgattgaactgctggagaaaata
gttcttgataactccgtgttcagtgagcacaggaatctgcagaaccttctcattcttaca
gctattaaggctgatcgcacccgtgtcatggagtacatcaatcgcctggataactatgat
gcgccagacatagccaatatagctatcagcaatgagcttttcgaggaggcatttgctatc
ttcaggaagtttgacgtcaacacctcagctgtacaggtattaatagagcacattggaaac
ctggatcgtgcatatgaatttgctgaacgctgcaatgagcctgctgtatggagtcagctg
gctaaagcacagcttcagaaagggatggtaaaggaagcaattgactcgtatattaaagca
gatgatccttcctcgtacatggaagttgttcaagctgccaatgccagtggaaactgggaa
gaactggtgaagtatctccagatggcacgcaagaaggcccgggagtcgtatgtggaaacg
gaactaatcttcgctcttgctaaaacaaaccgtctagcagagctagaggagtttatcaat
ggacccaacaatgcacatatccagcaagttggtgatcgctgttatgatgaaaagatgtat
gaagcagctaagctgttgtataacaacgtgtccaactttggccgtttagcctcgacttta
gttcacctaggtgaataccaggcagctgtggatggcgctcggaaagcgaacagtactcgc
acatggaaagaggtctgcttcgcttgtgttgatggaaaagagttccgcctggcccagatg
tgtggactccatattgtagtgcatgcagatgagttggaagagctaattaactattaccag
gatcgtggctactttgaagagctgataactatgttggaagcagcacttggacttgagcga
gcacacatggggatgtttacagagctagcaattctctactccaaattcaagccacagaag
atgagggagcacttggagctattctggtccagagtcaacatccccaaggttctgagagct
gcggaacaagcccatctctgggctgaactggtgttcttgtatgataagtatgaagaatat
gataacgccataatcacaatgatgaatcacccaacagatgcttggaaagaaggccagttc
aaagatatcatcactaaggtggccaatgtggagctgtattacaaggcagttcagttctat
ttggaatttaaacctctgttgctcaatgatctgctgatggtgttgtcccctcggcttgac
cacactcgtgctgtcaccttcttcacaaaggttaaacagctaccactggttaagccttac
ttgcgctctgttcaaaatcacaacaacaaatcggtgaacgagtccctgaacaacctcttc
attattgaagaagactaccaggctcttaggacttctatagatgcttatgacaactttgac
aacatttctcttgctcaacgcttggagaaacatgaactaatagaattccgaagaattgct
gcgtatctcttcaaaggaaacaatcgctggaaacagagtgtagaactctgtaagaaagac
agactgtataaggatgcaatgcagtatgcttcagaatccaaagatactgagttggcagaa
gagttgttgcagtggttcttgcaggagaacaagagagaatgctttggtgcttgtctcttc
acctgctatgatctcctgaggccggacgttgtcttggaaacagcgtggaggcacaacatc
atggactttgccatgccatactttattcaggtcatgaaggagtacttgaccaaggttgat
gcaataaaggaaaaggtggataaactggatgcatcagagtctttgagaaaggaagaggag
caagctacggaaacacaacctattgtttatggtcagccccagctcatgttgacagcagga
cccagcgttgcagttcctccacaagcaccttttggctatggctacactgcacctccgtat
gggcaaccgcagcctggctttgggtacagcatgtaa
DBGET
integrated database retrieval system
