Nipponia nippon (crested ibis): 104016741
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Entry
104016741 CDS
T05756
Symbol
SCARF1
Name
(RefSeq) LOW QUALITY PROTEIN: scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104016741 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nni04131
]
104016741 (SCARF1)
Membrane trafficking [BR:
nni04131
]
Endocytosis
Phagocytosis
Scavenger receptors
104016741 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_2
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
104016741
NCBI-ProteinID:
XP_009467950
LinkDB
All DBs
Position
Unknown
AA seq
939 aa
AA seq
DB search
MGSARPILCLQLWLWVQTSAQELDPGGRNVCRLPAGPACCPGWKQEGRECTAALCEGEDA
CGADEVCVRPGVCLCKPGFFGADCSSRCPEQYWGPDCKRSCPCHPNGRCDPASGRCTCDP
NHWGGLCQFPCQCGPHGHCDPLTGPCRCEPGWWAPTCKKQCQCNPASSHCDPLTGHCRCL
PGWWGRRCSFKCSCNLSPCAQETGKCECKAGFWGPACQRRCDCLHGSCSPLSGHCSCSPG
YQGRRGQRGGPAGTQGLQTSPPLCPCSCGSCKRSQPCSPVDGFCLACQPGWNGTLCKEPC
APGFHGEGCLQPCPRCRRGDICDPETGSCPRCEPGWMGPSCNSSCPAGTFGDGCQLLCPE
CVAGSCDPVSGACICQAGYWGASCNDTCPEGYFGVNCSSPCQCSRGTCHPARGDCMLSFK
DHGALAAAILVPLLLLLLCVACCCCGAGPADARDRYLLYFAPSMQNPVFCTPSHPPPLRR
AAVPDDDVVARMKHHVRGVLANLSAMMPCFSLGGYKLPKVTGKKSRAADSPSRVSPPPCA
LCIAPRGARAQLGVFSSPVSHHDTEIPFNPSFIEPPSAAWVSDSSFSSFDTDNEGPEYSV
PPREGVPLLGGAELQDGVSPLGEALPDPSAFDSEDVSQPFAIPRTSSIAKAKRPSVSFAE
GTKFGAAETPSPGRKPKTPWGPSKLSPPLGDVAAEPPPARPASDCYESPEPFGKGEESHR
PSPRATPGGRRRVVSGTRHVAQRVEALEAAAKSGSWEAKGKEPNVTTIYMMVGTTGQDPK
TEGGGEGPVQAVLKRLGSLQRGKWASKEEPRVRRSVEAIQKPPRRALAQCRDSVSSCKQR
ESVPGAPTEPSPGKHQHLPGKRHSFLLASPSPKSTGAQDGASDAVGATERGKSPELVLSL
ETEGQAVPEEEPKYENVISGSADSPPGPAKEPPAAPAAT
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggggagcgcccggcccatcctctgcctccagctgtggctatgggtgcagacctctgcc
caggagctcgaccctggcggcaggaacgtctgcaggctccccgccggcccggcgtgctgc
cccggctggaagcaggaagggcgggagtgcacggcggcgctgtgtgagggggaggacgcc
tgcggggcggacgaggtgtgcgtgagacctggggtttgcctctgcaaacccggcttcttc
ggagcagactgcagttcccgctgccccgagcagtactggggccccgactgcaagcggagc
tgcccgtgccaccccaacgggcgctgcgacccggcgagcgggcgctgcacctgcgacccc
aaccactggggagggctctgccagttcccttgccagtgtggcccccacggccactgcgac
cccctcaccggcccctgccgttgcgagccgggctggtgggcgcccacctgcaagaagcaa
tgccagtgcaaccccgccagttcccactgcgacccgctcactggccactgccgctgcctg
ccgggctggtggggcaggaggtgcagcttcaaatgctcctgcaacctctcgccctgtgcc
caggagacgggcaagtgcgaatgcaaggctgggttttgggggccggcatgccagcggcgc
tgcgactgcctgcacggctcctgcagccccctcagcgggcactgcagctgcagccccggc
taccagggcaggagggggcagcgggggggtcctgcgggtacccaggggctgcagacctca
ccgcccctctgcccgtgcagctgtgggagctgcaagcgcagccagccctgctcgcccgtg
gacggcttctgcctggcctgccagcccggctggaacgggaccctctgcaaggagccctgc
gcacccggcttccacggcgagggctgcctccagccgtgcccccgctgccggcgcggggac
atctgcgacccagagaccgggtcctgcccgcgctgtgagcccggctggatgggacccagc
tgcaacagctcctgccccgcgggcaccttcggcgacggatgccagctcctctgccccgag
tgcgttgcggggagctgcgaccccgtgtcaggagcttgcatctgccaggcaggctactgg
ggagccagctgcaacgacacctgcccagaggggtattttggcgtgaactgttcctcgccc
tgccagtgctcccgggggacctgccaccccgcgcggggtgactgcatgttgagttttaag
gaccacggggccctggcagccgccatccttgtccctctcctgctgctgctgctctgcgtc
gcctgctgttgctgcggagccggcccagcagatgctagagacaggtatttgttatatttt
gcaccttcaatgcaaaaccctgtcttctgcaccccttcacacccccctcccctgcgcagg
gcggccgtgccggacgatgacgtggtggcccggatgaagcaccatgtgcggggggtgctg
gcaaacctcagcgctatgatgccttgcttttccctgggcggctacaaacttcccaaagtc
acaggtaaaaaaagcagagctgccgacagcccttccagggtgtcaccgccaccctgtgct
ctttgcattgcaccccggggtgcccgagctcagctgggtgtcttctcctccccagtttcc
caccacgacacggaaatccccttcaatcccagcttcatcgagccgccgtcggccgcgtgg
gtttcagacagctccttctcctccttcgacaccgacaacgagggacccgagtactccgtc
cctcccagagaaggcgtcccgctgctggggggggccgagctgcaggacggggtgtccccc
ctcggcgaggcgctcccggacccatctgccttcgactccgaggacgtctcgcagcccttt
gccatcccccgcacctccagcatcgccaaggccaagcggccctctgtgtcctttgctgag
gggacaaaatttggggcggcggagacccccagccccgggcggaagcccaagaccccgtgg
ggcccatccaagctgtccccaccgctgggggacgtggcagctgagcccccccctgcacga
ccagccagcgattgctacgagagccccgagccctttggcaagggggaggaaagccaccgg
ccatcgccccgggccaccccggggggacgccggcgggtggtctctggcaccaggcacgtg
gctcagagagtggaggcacttgaagcggctgcgaaatccggcagctgggaggcaaagggg
aaggagcccaacgtcaccaccatctacatgatggtgggaactactgggcaggaccccaag
acggagggcggtggcgagggaccggtccaggctgtgctcaagcggctgggcagcctgcag
aggggcaagtgggcttcaaaggaggagcccagggtgaggaggagcgttgaggccatccag
aaaccgccccgccgggctctggcacagtgcagagactcggtgagtagctgcaagcagagg
gagagtgtcccaggggctcccactgagccgtcccctggcaagcaccagcatctccctggg
aagagacactccttccttctcgcatctccctcgccaaaaagcactggggcccaggatggg
gccagcgatgccgtaggtgccacggagaggggcaaaagccctgagttagtcctcagcctc
gaaacagagggacaggctgtcccagaggaagagccgaaatatgaaaacgtgatcagcggc
agtgccgattcgccccccggccccgccaaggagccgccggctgcccctgcggccacctga
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