Nipponia nippon (crested ibis): 104017015
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Entry
104017015 CDS
T05756
Symbol
SEC13
Name
(RefSeq) LOW QUALITY PROTEIN: protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03013
Nucleocytoplasmic transport
nni04141
Protein processing in endoplasmic reticulum
nni04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104017015 (SEC13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104017015 (SEC13)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
104017015 (SEC13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nni03019
]
104017015 (SEC13)
04131 Membrane trafficking [BR:
nni04131
]
104017015 (SEC13)
Messenger RNA biogenesis [BR:
nni03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104017015 (SEC13)
Membrane trafficking [BR:
nni04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
104017015 (SEC13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
104017015 (SEC13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
104017015 (SEC13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_EML
NBCH_WD40
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
104017015
NCBI-ProteinID:
XP_009468260
LinkDB
All DBs
Position
Unknown
AA seq
356 aa
AA seq
DB search
MQLKTDDGLTFDRVLRGNGPGAARCGVLVLVSPPPPQVSVINTVDTSHEDMIHDAQMDYY
GTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVI
IWKEENGTWEKTYEYTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLSYTGDGQWEVKK
ISNAHTIGCNAVSWAPAVVPGSLIEQPSGQKPNYIKRFASGGCDNLVKIWKEEDGQWKEE
QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNSWSPKLLHKFNDVV
WHVSWSITANILAVSGGDNKVTLWKESVDGLWACISDVNKGQGGVSAVTEGQQNEQ
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgaagacagatgacgggctcacgtttgaccgtgtgctgagaggaaatggccct
ggagctgcgaggtgcggtgtgcttgttcttgtctctcctcctccgccgcaggtctcggta
atcaacacggtggacacctctcacgaggacatgatacacgatgctcagatggattactat
ggcacccggctggcgacctgttcttcagacagatccgtgaaaatctttgatgttaggaat
ggagggcaaatcctcattgcggacctgagagggcatgaaggtcccgtgtggcaggttgcc
tgggctcatcctatgtacggaaatatcctggcttcatgttcctatgacaggaaggttatt
atctggaaggaggaaaacggcacttgggaaaagacatacgagtacacagggcatgattcc
tcagtgaattctgtctgctgggcgccacacgactatggattgatcctggcctgcgggagc
tctgatggggccatttcgttattgagctacacgggtgatgggcaatgggaagtcaaaaag
atcagcaatgcacatacgattggatgtaatgcagttagctgggctcctgctgttgtacca
ggaagccttatagaacaaccatctggtcaaaaaccaaactacatcaaaagatttgcatct
ggtggctgtgacaaccttgtcaagatctggaaggaagaagacggtcagtggaaagaagag
cagaagctggaggcccatagtgactgggttcgagatgtagcctgggctccatccataggt
ttgccaacaagcaccattgctagctgctcacaggatggtagagtgtttatctggacatgc
gatgatgcctctggaaattcatggtcaccaaagctgctgcacaagttcaatgatgttgtc
tggcatgtgagttggtccattactgcaaacattcttgcagtgtctggaggagacaataaa
gtcacgctatggaaggaatcagtagacggactgtgggcatgtatcagcgatgtcaacaag
ggccaaggaggggtgtctgccgtcacagaggggcagcagaacgagcagtga
DBGET
integrated database retrieval system
