KEGG   Nipponia nippon (crested ibis): 104017641
Entry
104017641         CDS       T05756                                 
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
  KO
K12850  pre-mRNA-splicing factor 38B
Organism
nni  Nipponia nippon (crested ibis)
Pathway
nni03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nni00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104017641 (PRPF38B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nni03041]
    104017641 (PRPF38B)
Spliceosome [BR:nni03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    104017641 (PRPF38B)
SSDB
Motif
Pfam: PRP38 PRP38_assoc
Other DBs
NCBI-GeneID: 104017641
NCBI-ProteinID: XP_009468961
LinkDB
Position
Unknown
AA seq 569 aa
MSRLLRQCGGRSRRPALTPLRPGPVTNDKGERRDRFPSLLSRWLRLSFPPAQQQLQSGAP
KPAASGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTH
VEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSP
YIRALGFMYIRYTQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFS
TLFPRIPVPVQKTIDQQIKSRPRKIKKDGKEGMEEIDRHAERRRSRSPRRSISPRRSPRR
SRSRSHHREGHGSSSFDRELERERERQRLEREAKEREKERRRSRSTDRTLERRRSRSRDR
YRSRSRSRDRKGDRRDRDREREKENERSRKKERDYDKERGSEREKDRSRERSKERKSKGD
TEERRHKDDKDDKKHRDDKRDSKKERKHSRSRSRERKHRSRSRSKNTGKRSRSRSKEKSS
KHKNESKEKSNKRSRSGSRGRTDSVEKSRKRDQSPSKEKPRRRSRSKERSHKHDHSDSKD
HSDKHDRRRSQSTERESQEKQHKNKDETV
NT seq 1710 nt   +upstreamnt  +downstreamnt
atgtcccggcttctccgccaatgcggaggcagaagcaggcgcccggcgctcacccccctg
cgccccggccccgtcaccaacgacaagggtgagcgacgggaccgatttccaagtttgctg
agccgctggctgaggctctcgttcccgccggcccagcagcagctgcagagcggagccccc
aagccggcggcctcaggcaagcaaggcaacgtgctgccgctgtgggggaatgagaagacc
atgaacctgaaccccatgatcctcaccaacatcctgtcgtcgccctacttcaaggtgcag
ctctatgagctcaagacgtaccacgaagtggtggacgaaatctacttcaaggttacgcat
gtcgaaccatgggagaaggggagcagaaaaacagcaggccagacagggatgtgtggaggg
gtgcgtggtgttggaactggaggaattgtgtctactgctttttgtctgctctacaaatta
tttacactgaaactcactcgtaagcaagtgatgggccttataactcatacagactctcca
tatattagggctcttggatttatgtatattaggtacacacaaccacctacagatctatgg
gactggtttgaatcctttcttgatgatgaagaggacctggatgtgaaggcaggtgggggt
tgtgttatgaccatcggggagatgcttcgttccttcctcactaagctcgaatggttttcc
acgttgtttccaagaattcctgtgccagtccagaaaaccattgaccagcaaattaaaagc
agacctagaaaaatcaagaaagatggcaaggagggaatggaagaaatagaccggcatgca
gaacgtagacgttcaaggtctccaagacgatccatcagtcccaggaggtctcccagaaga
tccagaagcagaagtcatcatcgggaaggccatggatcatctagttttgatagagaacta
gaaagagaaagggaacggcagagattagaacgtgaagctaaggagagagaaaaagaaagg
cggagatctcgaagtactgatcgcacgctagaacggaggcgaagcagaagcagggacagg
tacagaagccgtagtcgaagtcgtgacaggaaaggagatagaagagacagggatagggag
cgagagaaagaaaacgaacggagccggaaaaaagagagagattatgataaggaaagagga
agtgagagggaaaaagatcgatccagagagagatcgaaagaaaggaaaagtaagggtgat
acagaagagagaagacacaaggatgacaaggatgacaagaaacaccgggatgacaagagg
gattccaaaaaagagagaaaacatagcagaagtcgaagccgggaaagaaagcataggagt
aggagccgaagtaagaatacaggtaagcgcagcagaagcaggagcaaagagaaatcaagt
aaacataaaaatgaaagtaaagagaagtcaaataaacgcagcagaagcggaagcagagga
agaacagatagtgttgagaagtccagaaaacgagaccagagtcccagcaaagaaaaacct
agaaggcgcagcagaagcaaagaacgttcccacaaacacgatcacagtgatagcaaggac
cattcagacaaacacgatcgtcgaaggagccaaagtacggaacgagagagccaagaaaag
caacataaaaacaaagatgagactgtgtga

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