Nipponia nippon (crested ibis): 104017641
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Entry
104017641 CDS
T05756
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104017641 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nni03041
]
104017641 (PRPF38B)
Spliceosome [BR:
nni03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
104017641 (PRPF38B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
104017641
NCBI-ProteinID:
XP_009468961
LinkDB
All DBs
Position
Unknown
AA seq
569 aa
AA seq
DB search
MSRLLRQCGGRSRRPALTPLRPGPVTNDKGERRDRFPSLLSRWLRLSFPPAQQQLQSGAP
KPAASGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTH
VEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSP
YIRALGFMYIRYTQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFS
TLFPRIPVPVQKTIDQQIKSRPRKIKKDGKEGMEEIDRHAERRRSRSPRRSISPRRSPRR
SRSRSHHREGHGSSSFDRELERERERQRLEREAKEREKERRRSRSTDRTLERRRSRSRDR
YRSRSRSRDRKGDRRDRDREREKENERSRKKERDYDKERGSEREKDRSRERSKERKSKGD
TEERRHKDDKDDKKHRDDKRDSKKERKHSRSRSRERKHRSRSRSKNTGKRSRSRSKEKSS
KHKNESKEKSNKRSRSGSRGRTDSVEKSRKRDQSPSKEKPRRRSRSKERSHKHDHSDSKD
HSDKHDRRRSQSTERESQEKQHKNKDETV
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcttctccgccaatgcggaggcagaagcaggcgcccggcgctcacccccctg
cgccccggccccgtcaccaacgacaagggtgagcgacgggaccgatttccaagtttgctg
agccgctggctgaggctctcgttcccgccggcccagcagcagctgcagagcggagccccc
aagccggcggcctcaggcaagcaaggcaacgtgctgccgctgtgggggaatgagaagacc
atgaacctgaaccccatgatcctcaccaacatcctgtcgtcgccctacttcaaggtgcag
ctctatgagctcaagacgtaccacgaagtggtggacgaaatctacttcaaggttacgcat
gtcgaaccatgggagaaggggagcagaaaaacagcaggccagacagggatgtgtggaggg
gtgcgtggtgttggaactggaggaattgtgtctactgctttttgtctgctctacaaatta
tttacactgaaactcactcgtaagcaagtgatgggccttataactcatacagactctcca
tatattagggctcttggatttatgtatattaggtacacacaaccacctacagatctatgg
gactggtttgaatcctttcttgatgatgaagaggacctggatgtgaaggcaggtgggggt
tgtgttatgaccatcggggagatgcttcgttccttcctcactaagctcgaatggttttcc
acgttgtttccaagaattcctgtgccagtccagaaaaccattgaccagcaaattaaaagc
agacctagaaaaatcaagaaagatggcaaggagggaatggaagaaatagaccggcatgca
gaacgtagacgttcaaggtctccaagacgatccatcagtcccaggaggtctcccagaaga
tccagaagcagaagtcatcatcgggaaggccatggatcatctagttttgatagagaacta
gaaagagaaagggaacggcagagattagaacgtgaagctaaggagagagaaaaagaaagg
cggagatctcgaagtactgatcgcacgctagaacggaggcgaagcagaagcagggacagg
tacagaagccgtagtcgaagtcgtgacaggaaaggagatagaagagacagggatagggag
cgagagaaagaaaacgaacggagccggaaaaaagagagagattatgataaggaaagagga
agtgagagggaaaaagatcgatccagagagagatcgaaagaaaggaaaagtaagggtgat
acagaagagagaagacacaaggatgacaaggatgacaagaaacaccgggatgacaagagg
gattccaaaaaagagagaaaacatagcagaagtcgaagccgggaaagaaagcataggagt
aggagccgaagtaagaatacaggtaagcgcagcagaagcaggagcaaagagaaatcaagt
aaacataaaaatgaaagtaaagagaagtcaaataaacgcagcagaagcggaagcagagga
agaacagatagtgttgagaagtccagaaaacgagaccagagtcccagcaaagaaaaacct
agaaggcgcagcagaagcaaagaacgttcccacaaacacgatcacagtgatagcaaggac
cattcagacaaacacgatcgtcgaaggagccaaagtacggaacgagagagccaagaaaag
caacataaaaacaaagatgagactgtgtga
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