Nipponia nippon (crested ibis): 104017673
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Entry
104017673 CDS
T05756
Symbol
LAMA1
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04510
Focal adhesion
nni04512
ECM-receptor interaction
nni04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104017673 (LAMA1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104017673 (LAMA1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104017673 (LAMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
EGF_laminin
Laminin_G_2
Laminin_B
Laminin_N
EGF_LMN_ATRN
Laminin_I
Laminin_II
Laminin_G_3
3keto-disac_hyd
Tau95_N
Motif
Other DBs
NCBI-GeneID:
104017673
NCBI-ProteinID:
XP_009468994
LinkDB
All DBs
Position
Unknown
AA seq
3041 aa
AA seq
DB search
MFCKLVEHVPGRPLRNAQCRVCDHHSANPKEQHPISSAIDGTNNWWQSPSIQNGRQYHWV
TITLDLRQVFQVAYVIIKAANAPRPGNWVLERSIDGTEFRPWQYYAISDTECLTRYNITP
RIGPPTYKRDDEVICTSYYSRLVPLEHGEIHTSLINGRPSADDPSQKLLEFTSARYIRLR
LQRIRTLNADLMTLSHNDPKELDPIVTRRYYYSIKDISVGGMCICYGHARSCPLDEITKK
LQCQCEHNTCGESCNKCCPGYHQKPWRPGTISAGNKCEKCNCHNKAEDCYYNQSIADQKR
SMDIHGQYIGGGVCLNCTQHTTGINCEMCADGYFRPQKVSPYEDHPCYPCGCDPFGSLSS
DCIKDEHHSDSQRGTWPGQCQCREGYTGEKCDRCAFGYQGYPNCLRCNCSLIGSINEDPC
TEPCLCKENVEGENCDLCKPGFYNLQERNPQGCTECFCFGVSDVCDSLTWPISQISDMTG
WLVTDLYNVRGVQPQRSQFDGPHQISINNTEAVKVLKHTYYWSAPETYLGNKLTAFGGDL
KYTVSYDIPMESVDSDIVSSVDVIMQGNGQILSTRAAGLSLQPYEEYSNAVRFVPENFID
FNTKKAIDRERLMTVLVNVTHLLIRANYNIAKKAVYRLDSVTLDTASANVIDLSSAPDVE
FCECPQGYTGISCESCLPGYYRVDGILFGGICQPCKCNGHATECDIHGVCFACQHNTTGP
FCEQCLPGFYGSPSQGTSDSCQPCACPLSSAANNFSPTCQLSEGGGIVCDKCLPGYTGSQ
CERCANGYYGNPLMPGESCAPCECNGNVNPQEDGHCDTFTGQCLKCLGNTAGHHCEKCAD
GYYGDAVIEKSCRACACHVNGSLSSTCHPETGFCHCKSNVIGERCDKCSDGYYGLLTGLG
CIPCNCNRFGSVSEDCNHQGQCHCVPGVAGEKCDRCAHGFHAFQDGGCTPCDCAHTQNNC
NADSGQCICPPHTRGPKCEFCEENHWGLSPKLGCKACNCSNTGSASLQCDVLTGQCQCKA
EFGGQDCSRCALGYRDYPDCVACDCDLSGTKAEMCDDTEGLCGCEEETGICTCKENVFGL
QCSECKPGTFALSANSVLGCTPCFCFGMSTFCSELEDHVRIPITLTPDQSILHVVAQSNL
TGTVEGVFSQFPDVLLDAVIVRKYLNTETFYWRLPEQFQGDQLMAYGGKLRYTVAFYALD
GFGTSNFEPQILMKGGHTSKLVIYVDIPSPENGVRTDKEVEMKEDSWKYFNSVSDEPVLR
SDFMSVLSNVEYILIKAAYGQGLQQSRIANISMEIAVKFEEMHLGRARARLVEQCRCPAG
YAGLSCQSCAPGYYRGKHTELSVKEPHTLIVPCVPCQCNNHSETCDSETGKCLNCRDNTV
GDYCSACAPGYYGKVIGSVNDCALCACPRANPVSFSPTCVLKGIQDYHCDACLPGYEGQY
CERCSLGYYGDPQLPGGSCHPCQCNPSGSVHINCDRANGQCLCKQGVTGQLCEECEPRHL
LVEDKCVSCDDNCTGVLLNSLDNLNKAILSMNLTGVARVPYGILSELENATKHLKGSIVP
REDPTYSLATAKESLLSLSGGIDQLHEESSRFLKKAWQLNTMTQETRNKSQELTGFIDTV
HTTIKVLAEVAMSLNETLGLDLPLSNATSQSLQDDISALLNALRKKDFVQQHHNATSVLK
AAENLLIQVQKKYLKPQQELAQLKKDANQLLSKHNSTLQDAQDLVNEALANINETNRLFP
LISSNLAELNDKKLNIKEGEEVSTMLINEGKVLVNAAAALAQDVKNSTSNLEAHQDGLVL
WSTKLRHHVDELVMQMSVRGVLDLVYRAEDHATQFQRLADALESGLSKVRNVTLNTTAAV
YTHSSVKSVIERTEGLADDASRVVNGPLDLPDESLSLLGKETLLLSSKFQNEAKNLNKKS
DGLLFGLNGLNKKVEKIQESTNKIVNQLNDSLLMIRALPNDTRKYVLEVKELAVSANTSA
VVGLSHFGDFSQKLLNTSSTLSRVNDTLRKTSELITDSSKAAITAEKQVKEVEAQASLLL
DRLKPLKMLEENLNRNLSEIKELISQARKQAASIKVAVSADRDCIRAYQPQISSTNYNTL
TLNVKTAEXNLLFYLGSNGKTDFLAVEMRRGKVALLWDLGSGSTRVEYPDFQIDNNKWHR
IHATRFGKTGTLNIEEMNSNKKTSSKSASSPGTASILDVNKSTLMFIGGLGGQIKKSPAV
KVTHFKGCMGEASLNGKSIGLWNYMEREGKCNGCFGSPQDEDTSFHFDGSGYSVVEKALR
STVTQIIIFFSTFSPNGLLLYLASNGTRDFLSLELVDGKVRLTVDLGSGPLTLTTENRYN
NGTWYKISFSRNKKQGILAVMDAYNLNYKETKQGVSPGVASDLNRSDKDPIFIGGLPRSR
TVRKGLNSRMYVGCIKNLEISRSTFDLLGNSYGVRKGCVLEPIRSVNILNNGYIELIPKS
LSPESELMATFATKNSSGIILAGLSRGLEKRRRRQAHLPFFSIMLIDGHLAVHVNGGDRA
STRKVILRSANGTYSDGQEHSVILIWNKRIITVQVDESNPAELRLGSSAEMSSMNISNFY
AGGIPAGEGILGLKMAGSFHGCISNLIFNKELLYFTTSMKYEHVDMDSCFLSEKPKPAIQ
PEDIEIQPELQALPVPLRPLTDTKKVVCAKDELPDHVQGAHQFGLAKGSHLTLLFNQSTV
RKKLSVQLNLRTFASSGLIYYMAHQNQVDYAALQLHGGQLYFSFDLGKGKAVAFHPAAIS
DGKWHTIKTEYVKRKGIITVDGQETVAVSALGDGSTLDVEGKLYVGGLPLDYVPKNLGNV
RRSIPQIGSMTINSKQLDNESPVSIFAVNKCYVTVQDGTFFDGSGFAALVREGYKVRSDV
NITLEFRTTAVHGILLGVSSAKVDAVGLEIVNGKVLFHVNNGAGRITATYEPRGTNSLCD
GKWHKLQANKSKHRISLIIDGNLVQTDNPYIQSTSADTNNPIYVGGYPADVKQNCLTSKS
SFHGCLRNLMLTKGQQAELFDFSRAFDLRGVFPHSCPGAEH
NT seq
9126 nt
NT seq
+upstream
nt +downstream
nt
atgttctgcaaactggtggagcatgtcccaggacggcccctgcgtaacgcgcagtgccgc
gtctgcgaccaccacagcgccaatcccaaagagcagcacccaatttccagtgcaattgat
ggtaccaataactggtggcaaagtcccagcattcagaatgggaggcaataccactgggtc
accatcaccttggatttaaggcaggtctttcaagttgcatatgtcatcatcaaagctgct
aatgctccacgacctggaaactgggttttggaacgctccatagatggcacagagttcaga
ccatggcagtactatgcaattagcgatactgaatgtttaactcgttataatattacgcca
agaattgggccgccaacttacaagagagatgatgaagtgatctgcacctcctattattcc
agattagttcccctggaacatggagagattcacacatcactgatcaacggtaggcctagt
gctgatgatccttcacaaaagcttttggagtttacttctgcacgatacatccgcctacga
ctgcagcgtattagaacccttaatgctgacctcatgactctcagccataatgatcctaaa
gaactagacccgattgttaccagaaggtactactattcaataaaggacatctctgttggt
ggcatgtgtatttgttatggccatgctcgaagctgccctctggatgaaatcacaaagaaa
ttgcagtgccagtgtgaacacaacacatgtggagagagctgtaacaagtgctgtccgggc
taccaccagaaaccgtggagaccaggaaccatttctgctgggaacaaatgtgagaagtgc
aactgtcataacaaagcagaagattgttattacaatcagagtattgcagatcagaaaagg
agcatggatattcatggccagtatataggaggtggcgtgtgtttaaactgtactcaacat
actactgggatcaactgtgaaatgtgtgctgatggatattttagaccacagaaagtttct
ccctatgaggatcacccctgctatccctgtggctgtgacccgtttggatctctgagttct
gactgcattaaagatgagcaccattctgactcacagcgcgggacttggccaggtcaatgt
caatgtagagaaggttacacaggagaaaaatgtgatcgttgtgcatttgggtatcagggc
tatccaaactgcctgcgttgtaactgcagcctgattggtagcattaatgaagatccgtgc
acagaaccttgtctttgcaaagaaaatgtagaaggtgaaaactgtgatctctgtaaacca
ggattctacaatttgcaagaaagaaatcctcagggctgcacagagtgtttctgctttgga
gtttctgatgtctgtgacagcctaacatggcccatcagtcagatatcagacatgactgga
tggcttgttactgatctgtataatgtaaggggcgtgcagcctcagcgaagccaatttgat
ggaccccatcaaataagtattaacaacactgaggctgtgaaagtgctgaaacatacttat
tactggtcagcacctgagacatatctaggaaataaactcacagcttttggtggagacttg
aagtatacggtatcttatgacattccaatggagagtgtggacagtgatatagtatcgagt
gtggatgtcatcatgcagggtaatgggcagattttgagtacaagagcagcaggcttgtca
ttacagccatatgaggagtactctaatgcagtgagatttgtaccagagaatttcatagac
ttcaatacaaaaaaagctatagaccgggaaaggttgatgactgttctggtaaacgtgacc
catcttctgatcagggccaactacaacattgccaaaaaagccgtgtacagactggactct
gtcaccctggatactgcaagtgcaaatgttatagatctttcttcagcaccagatgtggaa
ttctgtgaatgtcctcaaggttacacaggaatatcctgtgagtcttgtctccctgggtac
taccgtgtggatggaatactctttggaggtatttgtcaaccctgcaaatgcaatgggcat
gcaactgagtgtgatattcatggtgtttgctttgcttgtcaacacaacacgacaggacct
ttctgtgaacagtgcttgcctggcttctatggaagtccatcccaaggaacttctgacagc
tgccagccctgtgcatgtcctctgagttctgctgcaaacaatttcagtcctacttgccag
ctgagtgaaggaggtggaattgtctgtgacaaatgtcttccaggctatactggttctcag
tgtgaaaggtgtgctaatggttactatggaaatccactcatgcctggagaatcgtgtgct
ccttgtgaatgcaatggcaatgtaaaccctcaagaagatggccactgtgataccttcacg
ggacaatgcctgaaatgtctggggaacacagcaggtcaccactgtgaaaagtgtgctgat
gggtattatggagatgcagtgattgagaaaagctgtcgtgcctgtgcgtgccatgtgaat
ggctccctttcaagtacttgtcatcctgagacaggcttctgtcactgcaaatcaaatgtg
atcggagaaagatgtgataagtgctcggatggttattatggcctgcttactgggcttggc
tgcattccctgcaactgcaatcgatttggctcagtctccgaggactgcaatcatcagggg
cagtgtcactgtgtaccaggagtggctggagaaaagtgtgatcgttgtgctcatggcttt
catgcgttccaggatggtggctgcacaccctgtgactgtgctcatactcagaacaactgt
aatgctgattctggccaatgcatttgtcctcctcacactcggggaccaaaatgtgaattc
tgtgaagaaaatcactggggactctctcctaaacttggctgcaaggcttgcaactgtagc
aacactggttcagccagtctccagtgtgatgtattgacgggtcaatgccagtgcaaagct
gaatttggaggacaagactgttccaggtgtgcattaggctacagggactacccggactgt
gttgcctgtgattgtgatttgagtggaaccaaagcagagatgtgtgatgacactgaagga
ctttgtggttgtgaagaagaaactggcatctgtacctgcaaggaaaatgtatttggtcta
caatgcagtgagtgtaaacctggaacttttgctctgtctgctaacagtgtattaggttgt
actccatgcttctgttttgggatgtccacattttgttcggaactggaagatcatgtgaga
attcctatcaccttaactccagatcagtccattctgcatgtagtagctcaaagtaacctg
actggaacagtagaaggagtattttcgcaatttcctgatgttttactggatgctgttata
gtcagaaaatacttaaatacagaaacattttactggaggttaccagagcagtttcaggga
gaccagctcatggcctatggagggaagctgagatatactgttgctttttatgctttggat
ggctttggaacctcaaattttgagccacagattctaatgaaaggaggtcacaccagcaag
ctggtcatctatgtagacatcccttctccagaaaacggcgtaagaactgacaaggaagta
gaaatgaaggaggattcttggaagtattttaactctgtgtctgatgagcctgtcttacgt
tctgacttcatgtctgtgctaagcaatgttgaatacatccttatcaaggcagcttatggc
caaggattgcagcaaagcagaattgcaaatatctcaatggaaattgcagtgaagtttgaa
gaaatgcatctaggcagagctagagctcgtcttgtagagcaatgtagatgtcctgctggt
tatgctggattgtcctgtcagagctgtgctccaggatactacaggggaaaacatacagaa
ctcagtgtaaaagagcctcacactctgatagtaccttgtgtgccttgtcagtgcaacaac
cacagtgaaacctgtgattctgaaactggaaagtgcttgaactgcagagataacacagtt
ggtgattactgcagtgcttgtgccccgggctactatgggaaagtaattggatctgtcaac
gactgtgccctttgtgcctgtccaagagccaaccctgttagttttagtcccacttgtgtc
ctgaaaggtattcaggattaccactgtgatgcttgtctcccaggatatgaaggacaatac
tgcgaaaggtgctcccttgggtattatggtgaccctcagcttcctggtggcagctgccat
ccatgtcagtgcaatccaagtggctctgttcacattaattgtgatcgtgcaaatggccag
tgcctctgtaagcaaggtgtgacaggacagctctgtgaggagtgtgaaccaagacatctt
cttgtggaagacaagtgtgtttcttgtgatgacaactgcacaggagttttgttaaacagt
ttggataacctcaacaaggccatactttcaatgaacctcactggtgttgcccgtgtgccc
tatgggatattgtcagagttggagaatgcaacaaaacatctgaaggggtctatagttcct
agagaagatccaacttactcattagctacagcaaaagaaagtcttctgagtttatcagga
ggaattgatcagctgcatgaagagtcgtctagatttttgaaaaaagcttggcagcttaac
acaatgactcaggaaaccaggaataaaagtcaagaactgactggatttattgacacagta
catacaaccatcaaagtacttgctgaagttgctatgtcactaaatgaaacactgggcctg
gatctcccgctgtcaaatgctacatctcagagcctgcaggatgatatttctgcccttttg
aatgcattgcgcaagaaagattttgttcaacagcaccataatgctaccagtgtcctaaaa
gctgcagaaaatttgttgatccaggttcagaaaaagtatcttaaaccccagcaggagctt
gctcaactaaaaaaggatgcaaaccagctcttatcaaagcacaacagcacactgcaagat
gcccaggacctggtgaatgaggcactcgctaacatcaatgagaccaatcgcttgtttcct
cttatctctagcaacctggcagagttaaatgacaaaaagctaaatataaaggaaggtgaa
gaagtctcgaccatgctcattaatgaagggaaggtcctagtgaatgctgctgctgctctt
gcccaagatgtaaagaactctacatctaacctggaggcccaccaggatgggttagtccta
tggagcaccaaattgcgacaccacgtggatgagctggtgatgcagatgtctgtgagagga
gtgcttgacctggtatacagagccgaggaccatgccacccagttccaaagacttgcagat
gcactagagagtggcctctctaaagtaagaaatgtgactctgaacacaactgctgctgtc
tacacccactccagtgttaaaagtgtgattgaaagaacagagggtttggcagatgatgca
tctagagttgtgaatggccccttggatttaccggacgagtctctcagtcttcttggaaaa
gaaactctactgcttagctccaaatttcagaatgaagctaaaaatctgaacaaaaaaagt
gatggccttttatttggattgaatgggttgaacaaaaaggtagaaaagattcaggaaagt
actaataaaattgtcaaccagcttaatgattccctgttgatgataagagcattgcctaat
gatacaagaaaatacgtgcttgaggtgaaagagctggctgtttctgcaaacaccagtgct
gtggtgggtttaagtcactttggggatttcagtcaaaagctgctgaatacttcttctacg
ttgtcccgagttaatgacacattgaggaaaactagtgaacttataactgattcatcaaaa
gctgcaatcacagctgaaaaacaagttaaagaagtcgaagcacaagcaagtcttttattg
gataggctgaagcctttgaaaatgctagaggagaacctgaacagaaacctgtctgaaatt
aaagagctcatcagccaggcccgcaagcaggcagcatctattaaagttgcagtatcagca
gacagagattgcattcgtgcctaccaaccccaaatttcatctacaaattacaacacctta
acactcaatgtgaagactgctgaanntaacctccttttctacctgggtagcaatggaaag
acagacttccttgcagtggagatgcgacgtggtaaggtagctcttctttgggatttgggc
tctggatcaacaagagtggaataccctgattttcaaattgacaacaacaaatggcataga
atacatgcaaccaggtttggaaaaacaggtacactcaacatagaggaaatgaactccaat
aagaaaacttcgtctaaatctgcatcctctccggggacagccagcatactggatgttaac
aaatcaaccctaatgtttatcggaggacttggagggcaaatcaagaaatcacctgctgtt
aaggtgacccattttaaagggtgcatgggagaggcatccctgaatggcaaatctattggt
ctttggaactacatggaaagagagggcaagtgcaatggctgttttggaagcccacaggat
gaggacacttcatttcattttgatggcagtggatactcagttgtggagaaggcactccgc
tcaacagtgactcagataataatatttttcagtacattttcacctaatgggcttcttctg
tatcttgcttcaaatggcactagagatttcttgtcccttgagcttgttgatggcaaagtg
agactgactgttgatctaggttcaggacctcttactcttacaacagaaaatcgttacaac
aatggaacatggtataaaatttcattcagtcggaacaaaaaacaaggaattttggcagtc
atggatgcatataatcttaattataaagaaaccaagcaaggagtatctcctggggttgcc
tcagacctgaatcgctctgataaggacccaatcttcattggagggctgccaagatcaagg
actgtgaggaaaggtcttaatagtagaatgtatgtgggatgcatcaagaatctggaaata
tcccgttcaacctttgacttgcttggaaattcatatggagtaagaaaaggctgtgtattg
gagcctattcgtagtgtgaacatcttgaacaatggatatattgagttgatacctaagtcc
ttaagcccagaatcagaactgatggcaacttttgctacaaagaacagcagtggcatcatc
cttgctggactcagcaggggactggaaaagcgacgacgtagacaagcacatttgcccttc
ttttccatcatgctgattgatggtcatctcgcggtgcatgttaatggtggagatagagca
agtactagaaaagtaattcttcggtctgctaatggaacatacagtgatggacaagaacac
tctgtcatcttaatctggaataagaggatcataactgtacaagtggatgaaagtaaccct
gcagaactgaggcttggttcatcagcagaaatgagctccatgaatatttccaacttctac
gctggtggcattccagcaggagagggcatcttagggctaaaaatggctggctcgtttcat
ggctgtatcagcaatcttatttttaacaaggagcttttgtatttcaccacttccatgaag
tatgaacatgtggatatggacagctgctttttgtcagagaagcctaaaccagccatacag
ccagaagacattgagattcaacctgaacttcaggctttaccagttcctctgaggcctctt
acagatacaaaaaaagtagtttgtgcaaaagatgagctacctgatcatgttcaaggtgcc
catcagtttggacttgccaaaggcagccacttgacactgctcttcaatcagtctactgtc
aggaagaaactttccgtccagttgaatctcagaacctttgcctccagtggcctgatttac
tacatggctcaccagaaccaggttgattatgcagccctacagcttcatgggggacagctc
tatttctcatttgatctaggcaaaggaaaagcagtagcttttcaccctgctgctatcagt
gatggaaaatggcatacgataaagacggaatacgttaaaagaaaaggtataatcactgtg
gacggacaggaaacagtagcagtcagtgctctgggagatggtagcactttggatgtggag
gggaagctctacgtaggaggactgcccttagactacgtgccgaagaaccttgggaatgta
agaagatcaattcctcaaattggtagcatgacaattaatagcaaacaactggacaacgag
agccctgtctccatctttgctgtgaataaatgctatgtaacagtgcaggatggtactttc
tttgatgggagcggctttgctgctcttgtcagagaaggttacaaagtccggtctgatgtg
aacatcacactggagtttcgtacgacagcagtgcatggcattctcctcggggtcagcagt
gctaaggttgatgccgttggactggagattgtaaatggcaaggttttattccatgtcaac
aatggagctggcagaataacagctacctatgaaccaagaggcacaaacagtttatgtgat
ggaaaatggcacaagcttcaagcaaacaaaagcaaacatcgcatttcgctgataattgat
gggaatttggttcaaactgataatccctacatccagtcaacatctgcagatacaaacaat
cccatttatgttggaggctatcctgctgatgtgaagcaaaactgcctcacaagcaagagc
tcattccatggctgtttgaggaacctcatgttgaccaagggccaacaggcagaattgttt
gacttcagcagagcttttgacctgcgtggagtctttcctcattcctgccctggggctgag
cactga
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integrated database retrieval system
