Nipponia nippon (crested ibis): 104017683
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Entry
104017683 CDS
T05756
Symbol
SEH1L
Name
(RefSeq) nucleoporin SEH1
KO
K14299
nucleoporin SEH1
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03013
Nucleocytoplasmic transport
nni04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104017683 (SEH1L)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
104017683 (SEH1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nni03019
]
104017683 (SEH1L)
04131 Membrane trafficking [BR:
nni04131
]
104017683 (SEH1L)
Messenger RNA biogenesis [BR:
nni03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104017683 (SEH1L)
Membrane trafficking [BR:
nni04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
104017683 (SEH1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
EIF3I
Motif
Other DBs
NCBI-GeneID:
104017683
NCBI-ProteinID:
XP_009469009
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MAMAGEGRRGKRQHRSGDGDWAPGDGDGGEGDDRKQTGCPVLARWALPSSSRGEVMQLGC
DDNNQGGGRDPERQKRGDFRKKKSHQDDKDVWDKSENGDWHCTASWKTHSGSVWRVTWAH
PEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMG
LMLATCSADGVVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHSPMIAVGSD
DNSPNILAKVQIYEYNENTRKYAKAEALMTVTDPVHDIAFAPNLGRSFHILAVATKDVRI
FTLKPLRKELTSSGGLTKFEIHIVAQFDNHNSQVWRVSWNITGTVLASSGDDGCVRLWKA
NYMDNWKCTGILKGNGSPVNGSSQQGIFNASLGSANTSLQNSLNGSSASRYFFPPLDSPR
AGSRWSSHAQLLPPPPLIEHSCDADTANIQYPHPRRRCVSRPLNLLPENEGV
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggccatggcaggagaggggaggaggggaaagcggcagcaccggtcaggagacggcgac
tgggctccgggggacggtgatggtggggaaggtgatgacagaaagcaaacgggatgcccc
gttctcgctaggtgggccctgccgagtagcagtcggggagaagttatgcagttgggctgt
gatgataacaaccaaggtggtggtagagatccagaacgccaaaagcgaggtgactttcgg
aaaaaaaaaagtcatcaagatgataaagatgtctgggacaaaagtgaaaatggggattgg
cattgcactgccagctggaagacacatagtggatctgtgtggcgtgtgacatgggctcat
cctgaatttgggcaggtcctggcttcctgctcttttgatagaacagcagctgtatgggaa
gaaatcgtgggagagtcaaatgataaactccgaggccagagtcactgggtaaagaggacc
actctagtagacagtaggacgtctgtcacagatgtgaagtttgctcccaagcatatgggt
cttatgttagcaacctgttcagcagatggagttgtaaggatttatgaagctccagatgtg
atgaatctcagtcagtggtcactgcagcatgaaatctcatgtaaactaagctgcagttgt
atttcttggaatccttcaagctctcgagcacattctccaatgatagctgtaggaagtgat
gacaacagtccaaatatattggctaaggttcaaatttatgaatataacgaaaataccagg
aagtatgcaaaagcagaggctctgatgacagtcacggaccctgtccatgatatcgcattt
gctccaaatctgggaagatccttccacatcttagctgtagcaaccaaagatgtacgaatt
ttcacactaaaacctctaaggaaagaattgacttcatctggaggattaacaaaatttgaa
attcatattgtggcacagtttgataatcacaactcccaggtgtggcgagtgagctggaat
attacaggcacagtgcttgcctcctctggtgatgatggctgcgtgaggctctggaaggct
aattacatggacaactggaagtgtactggtatattgaaaggtaacgggagtccagtgaat
ggtagttctcagcagggaatttttaatgcctctctaggttcagccaatacaagtctacag
aattcactaaatggatcatctgccagcaggtatttctttccccctctggattccccacgg
gctggatcgagatggtccagtcatgcccagctccttcctcctcctcctctgatagagcac
tcttgcgatgctgacactgccaacatccagtatcctcaccctcgcagacgatgtgtatct
cggcctcttaatctgttacctgagaatgaaggggtttaa
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