Nipponia nippon (crested ibis): 104017716
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Entry
104017716 CDS
T05756
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104017716 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nni03000
]
104017716 (ARID1A)
03021 Transcription machinery [BR:
nni03021
]
104017716 (ARID1A)
03036 Chromosome and associated proteins [BR:
nni03036
]
104017716 (ARID1A)
Transcription factors [BR:
nni03000
]
Eukaryotic type
Helix-turn-helix
ARID
104017716 (ARID1A)
Transcription machinery [BR:
nni03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104017716 (ARID1A)
Chromosome and associated proteins [BR:
nni03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104017716 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
104017716
NCBI-ProteinID:
XP_009469045
LinkDB
All DBs
Position
Unknown
AA seq
1912 aa
AA seq
DB search
MKLDAHHMLPLALQPSSPMDQMGKMRPQPYGGNNPYTQQQGPQAGPQQGHGYPGQPYGPQ
TPQRYPMGMQSRTQSTMGSISYAQQIPPYGQQGPSAYGQQSQTPYYNQQSPHPQQQQPPY
SQQPPSQTPHSQPSYQQQQQPQSQPPQLQTSQPAYSQQQSQAPHQQSPTPYPQQQSTAQQ
HQQSQPPYSQQQSQSPYQQQQQTQQTASSALSQQSSSYPQSQPQQQQSAYSQQRFPPPQE
LSQDSFGSQASSAPSMASSKGQEDMNLNLQSRPSSLPDLSGSIDDLPMGTEGALSPGVST
SGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQ
MPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQSSGGQMHA
GMGPYQQNSMGSYGPQGGQYGPQGGYPRQPNYNAMSNANYPSPGMGGSMNPMGAGSQMHG
QTGVPPYSGLPPGRMSHATMGNRPYGPNMANMPPQVGTGMCPPPGGMNRKAQEAAAAAMH
AAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGSITPQGPPYPMGGNMANNSAGMA
ASPEMMGLGDVKLTPATKMNNKADGTPKAESKSKKSSSSTTTNEKITKLYELGGEPERKI
WVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELATNLNV
GTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQTKIQPPSPAGSGSMQ
GPQTPQSTSSSMAEGGDLKPPTPASTPHSQMPPLPGIRSNSVGLQDAFADGSDPTFQKRN
SMTPNPGYQPSMNTSDMMGRMSYEPNKDPYSSMRKAPGSDPFMSSGQGPNSGMGDPYNRA
AGPGMGNMAMGQRQHYSYGGPYDRVRTEPGMGPEGNLATGTPQPNIMPSTPESGMYSPSR
YPQQQQQQQQRHDSYGNQFSTQGTSSGSPFPSQQTTMYQQQQQNYKRPMDGSYGPPAKRH
EGEMYNVPYSAGQGQTQQQLPPAQTQQPSQQQTAQPSPQQDLYNQYGSTYPAADRRSAGG
PQNQFPFQFGRDRVSAPPGSNAQQNMPPQMMGGPIQPTPEGPQQGAMWQGRNEIGYSYPN
RQSTGSAPQGPAYHGVTRTDEILHSDQRVNHEGPWPSHGNRQPPYGPSAPVPPMTRPPQS
NYQTPPSMQNHIPQVSSPAPLPRPLENRTSPSKSPFLHSGMKMQKAGPPVPASHITPAAV
QPPMIRRDITFPPGSVEATQPVLKQRRRLTAKDIGTPEAWRVMMSLKSGLLAESTWALDT
INILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPERF
CKSSASSHEEGEEEDEPRSLNCEEEEEDEEEEEAAFSSKDKAPLESSEEKLVSKFDKLPV
KVVQKNDPFVVDYSDKLGRVQEFESGLLHWRIGGGDTTEHIQTHFESKTELPLTHKRASC
NSVLRKRSAAESNPSTREGETPPSDSSSEKRITATMDDMLSARPGSLAGEEEEVKALETA
KESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCICVSNIIRSLSF
VPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWDCL
EMLRENTLVTLANISGQLDLSPYPESICLPILDGLLHWAVCPSAEAQDPFPTLGPNAVLS
PQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLAN
LAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQAGLMHMQNPPFESTSVDMMRR
AARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
5739 nt
NT seq
+upstream
nt +downstream
nt
atgaaactggatgcacatcacatgttgccacttgctttgcagccttcgagcccaatggat
cagatggggaagatgaggcctcagccgtatggaggaaacaacccgtacacacaacagcag
ggacctcaagcggggccacagcaaggacatggctatccaggacagccgtatgggccacaa
actccccagagatatcccatgggaatgcaaagcaggacacagagtacaatgggcagcatc
tcatatgcacagcagattcctccttacggacaacaaggccccagtgcatatgggcagcaa
agccagactccgtattacaaccagcaaagccctcatccccaacagcagcagcctccatat
tctcagcagcctccatcccagacccctcactctcagccttcttatcagcagcagcaacag
cctcagtctcagcctccacaacttcagacatcgcagcctgcgtattctcagcagcagtcc
caggcgccccatcagcagtccccaactccgtatcctcaacagcagtccacagcccagcaa
catcaacagagtcagcctccctactcacagcagcagtcacagtcgccctaccagcagcag
caacaaactcagcagacagcttcctcggctctttctcagcagtcgtcttcataccctcag
tcacagccgcagcagcagcagtctgcatactcccagcaacgcttcccccctcctcaggag
ttatctcaagactcatttgggtcccaggcatcatctgctccctcaatggcttccagtaaa
gggcaagaagatatgaacttgaatcttcagtccagaccttctagcctgccggacctgtct
ggttcaatagatgatctacccatgggtacagaaggagccctgagtcctggagtaagcaca
tcagggatttccagcagtcaaggagagcagagtaacccagctcagtctcctttctctcca
catacctctcctcacctgccaggcatccgaggaccctccccatccccagttggatctcca
gctagtgttgcgcagtcccgctctggtccgctttcacctgctgcagtaccaggcaatcag
atgccaccccgaccgcccagtggccagtcggacagtatcatgcatccttccatgaaccag
tcaagcatagcgcaagatcgaggttacatgcagaggaatcctcagatgccccagtacagc
tcgccccagcccggctcagccttatctccccggcagtcttctggaggacagatgcacgct
ggaatggggccataccagcagaactccatgggaagctacggaccccagggcgggcagtac
ggacctcaaggaggttatcccaggcagccaaactacaatgctatgtccaatgccaactac
cccagtcccggaatgggaggaagcatgaaccccatgggagcagggagccagatgcatggg
cagactggcgtgccgccgtacagcgggcttcctcccgggaggatgagccatgcaaccatg
gggaacagaccttacggacctaacatggccaacatgccgcctcaggtggggacggggatg
tgccccccgccaggtggcatgaatcgcaaagcacaagaagcggccgctgccgccatgcat
gctgctgccaactccatccagaacaggcctcctggttatcccaacatgaatcaaggggga
atgatgggcactgggcctccttatggacagggaattaacagtatggctggcagcatcacc
ccccagggcccgccctatccgatgggaggcaatatggctaacaactctgcagggatggca
gcaagccctgaaatgatgggtcttggggatgtcaagttaacacctgcaactaaaatgaac
aataaggcagatgggacgccaaaagcagaatccaagtcaaagaagtccagttcctctact
acaaccaatgagaagatcaccaaactctatgagctgggtggtgagcctgagaggaagatc
tgggtagatcgttacctggccttcactgaagagaaggccatgggcatgacaaatctccca
gcagtaggcaggaaacccttggacctttaccggctctacatctcagtgaaggagattgga
ggactgactcaggtcaacaaaaacaagaaatggcgcgagttagccacaaatctcaatgtg
ggcacgtccagcagtgcagctagttctttgaagaagcagtacatccagtgtctctatgcc
tttgagtgcaagattgagcgaggtgaagacccccctccagatatctttgcagctgccgat
tcaaagaagtctcagactaagatacagcctccatctccagcgggttcaggctcaatgcag
ggtcctcagacgcctcagtccaccagcagctccatggcagaaggaggagacctgaagcca
ccaactccagcatctacgccacacagtcagatgccccctttgccaggcatcaggagtaac
tcagtgggccttcaggatgcctttgcagatggtagtgatcctacgttccagaagcggaac
tccatgactccaaatccagggtaccagcccagcatgaatacctccgacatgatgggtcgc
atgtcttacgagccaaataaagatccttacagcagtatgaggaaagctccaggaagcgat
cccttcatgtcctcagggcagggccccaacagtggtatgggtgacccttacaatcgtgct
gcaggtccagggatgggtaacatggccatgggacagcggcagcactattcctacggaggt
ccttacgacagagtgaggacggagcccggcatgggacccgagggcaacttagcgaccgga
actccgcagccaaacatcatgccttccacccctgaatcggggatgtactctcccagccgc
tacccgcagcagcagcagcagcagcagcaaagacatgattcctatggcaatcaattctcc
actcaaggcacatcctcgggcagccccttccctagccagcaaactaccatgtatcaacag
caacagcagaattacaagcgaccgatggatggcagctacggcccgcctgccaagcgacac
gaaggggagatgtacaacgtaccatacagcgccgggcaggggcagacgcagcagcagctg
cctccagcacagacccagcaaccgagccagcagcaaactgcacagccgtctccacagcag
gacttgtataaccagtatgggagtacataccctgctgctgaccgccgatctgccggaggg
ccacagaaccagttcccattccaatttggcagagacagggtctcggctcccccaggctcc
aatgctcagcaaaacatgcctcctcagatgatgggtggtcccatacaacctactccagag
ggcccgcagcaaggcgccatgtggcaagggcgcaacgaaatagggtacagctatccgaac
cggcagagcactggctctgcgccccaggggcctgcttatcacggagtgactcgaacagat
gaaattctgcattcagaccagagggtcaaccatgagggaccatggccttcccatgggaac
cggcaacctccttatggtccctctgcccccgtgcccccaatgacgaggcccccccagtct
aactaccagaccccccctagcatgcagaatcacattcctcaggtatccagcccagcacct
ctgcccagacctctggagaatcgcacttctcctagtaaatctccattcctgcactcgggg
atgaaaatgcagaaggcaggaccgccagtccctgcctcgcatataacaccagcagctgta
cagcctcccatgatccgacgagacatcaccttccctccgggatcagtagaagctacgcaa
cctgtgttgaagcagaggaggcggctgacagcaaaagatatcggaactcctgaagcctgg
agagtgatgatgtctctgaagtctgggctgctagctgaaagtacgtgggccttagatacc
ataaacatcctgctctatgatgacaacagcataatgaccttcaacctcagccagctgccg
ggcttgctggaactcttggtggagtatttccggcgctgcctgatcgagatctttgggatc
ctgaaggaatacgaggtgggagacccagggcaaagaacactattagatcccgaaaggttc
tgcaagtcttcagcttcctctcatgaggaaggggaggaggaggatgaaccacggagcctg
aactgtgaggaggaagaagaggatgaggaagaggaggaggctgcgttttcgagcaaggac
aaagcacctctagagagcagtgaggaaaaactagttagtaaattcgacaagcttccagtc
aaggtcgtgcagaaaaacgacccgtttgtggtagattattcagacaagctggggcgagtg
caggagttcgaaagcggactgttgcactggcggattggcggcggagataccaccgagcac
attcagacccactttgagagcaagacggagctacctttgactcataaacgagcttcctgc
aactccgtcttgaggaaacgttcagcagccgagagcaatccgagcactagggaaggagag
actcctccatccgacagctcctcggagaagaggataactgccaccatggacgacatgctt
tcggcacgtccgggctccctggcaggggaggaggaagaggtcaaagctttggaaacggca
aaggaaagcagcaagtttccctttggcattagtccagctcagagtcacagaaatataaaa
attctggaggacgaacctcacagtaaagacgagacgcccctctgcaccctcctcgactgg
caggactctctggcgaagcgctgcatctgtgtctctaacatcatcaggagtttatcgttt
gtgccgggcaatgacttcgagatgtctaaacatcccgggctgctgctgattctagggaaa
ctgattctcttgcaccacaagcacccagaacgcaaacaggcgcccctgacctacgagaaa
gaggaggagcaggaccaaggggtgagctgcaacaaggtggagtggtggtgggactgcttg
gagatgctgcgtgaaaatacactggtcacgctggccaacatttctggccagctggacctc
tccccttacccggaaagcatctgtttgcccatcctggatggactcctccactgggcagtc
tgtccgtcagcagaggcccaggatccctttccgacactggggcccaatgcggtcctctcc
cctcagagactggttttggaaacactcagcaaactcagcatccaggacaacaatgtggat
ttgattcttgcaactccccccttcagtcgcttggagaagctgtacagcaccatggtgcgg
ttccttagtgacagaaagaacccggtgtgtcgagagatggctgtggtactactggccaac
ttggcacagggggacagcctggcagcaagagcgattgctgtgcagaagggcagcattggc
aacttgctgggcttcttggaggacagcctggccgccacgcagttccagcagagccaggcc
ggcttgatgcacatgcagaacccgccctttgagtcgacgagcgtggacatgatgcgccga
gctgctcgggcgctgctcgccctggccaaggtggacgagaaccactcggagttcacgtta
tacgagtcgcggctgttggacatctccgtgtcgcctttgatgaactctttggtttcacaa
gttatttgtgatgtactgtttttaattggccagtcatga
DBGET
integrated database retrieval system
